FFCP PHASE1:Hg19::chr11:2017416..2017437,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:2017416..2017437,- to FFCP PHASE1:Hg19::chr11:2017416..2017437,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000442037_5end | |||
|cluster_id=chr11:2017416..2017437,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_13_at_H19_5end | |||
|id=chr11:2017416..2017437,- | |||
|ontology_enrichment_celltype=CL:0000136!1.75e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.00e-17;19!CL:0002577;5.51e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.91e-17,19;CL:0002577,5.46e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.37e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.17e-12!14;UBERON:0000158!2.17e-12!14;UBERON:0001557!6.23e-12!19;UBERON:0001737!1.22e-11!9;UBERON:0003104!1.41e-11!238;UBERON:0009142!1.41e-11!238;UBERON:0000478!1.62e-10!24;UBERON:0000481!1.76e-09!347;UBERON:0003124!2.37e-09!7;UBERON:0004119!4.62e-09!169;UBERON:0000925!4.62e-09!169;UBERON:0006595!4.62e-09!169;UBERON:0004921!5.23e-09!129;UBERON:0004185!5.23e-09!129;UBERON:0003103!6.68e-09!69;UBERON:0004923!6.91e-09!57;UBERON:0000077!8.10e-09!130;UBERON:0000064!5.30e-08!219;UBERON:0001007!5.92e-08!155;UBERON:0001555!5.92e-08!155;UBERON:0007026!5.92e-08!155;UBERON:0002417!6.38e-08!61;UBERON:0000916!6.38e-08!61;UBERON:0009569!6.91e-08!113;UBERON:0001041!8.81e-08!98;UBERON:0000926!5.70e-07!448;UBERON:0004120!5.70e-07!448;UBERON:0006603!5.70e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.20e-17;9!UBERON:0001557;4.20e-17;9!UBERON:0000478;4.47e-17;24!UBERON:0005631;3.59e-12;10!UBERON:0000158;3.59e-12;10!UBERON:0001987;1.41e-08;4!UBERON:0000305;1.84e-07;7!UBERON:0001134;2.19e-07;16!UBERON:0002036;2.19e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.14e-19,14;UBERON:0000158,7.14e-19,14;UBERON:0000478,4.15e-17,24;UBERON:0001737,4.19e-17,9;UBERON:0001557,9.51e-17,19;UBERON:0003124,1.41e-13,7;UBERON:0004921,2.25e-09,118;UBERON:0004923,3.87e-09,66;UBERON:0001041,5.10e-09,87;UBERON:0001987,1.39e-08,4;UBERON:0004340,1.39e-08,4;UBERON:0004119,1.59e-08,160;UBERON:0000925,1.59e-08,160;UBERON:0006595,1.59e-08,160;UBERON:0000305,1.84e-07,7;UBERON:0000072,3.99e-07,47;UBERON:0001007,5.21e-07,145;UBERON:0001555,5.21e-07,145;UBERON:0007026,5.21e-07,145 | |||
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|phase1_expression=1.81678379270557,0.642301571672949,0.704772020479856,4.00293193412522,0.893922188854576,11.3404008133048,0,0,0.522371256399677,0.737201809504527,0.697801167972428,64.4402047784008,45.8954542117509,0.123766352960047,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0,0,0.289693037921647,2.3858578411533,0.486634870302636,0,0,0.087834785693126,0.654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,2.80338800071154,0,0,1.24484414159907,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,28.2753252095227,24.2761953712466,28.9213235860178,24.5955559193238,30.2852427288445,25.8624974831095,29.9325504115565,29.2369983036766,31.9340140265504,0.738155454624648,1.40241773803446,4.115740113314,14.7008711385542,0,0,2.36315962672562,0,0,0,0,0,0,1.11106134190236,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,1.42977993658148,88.4473216788052,4.11620168390384,0,0.710783897485092,1.58390374586686,0,0,0,0,0,0,0,0,0,4.1986578933598,2.4657158706046,7.69962141931551,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,1.50051156317903,0,0,0,0,0,0.300946099727719,0,5.17365356462525,0,0,0,18.4053088014976,19.2160317334079,0,0,0,26.9783538587171,149.791895559447,36.5892254928913,3.47350930946288,0.153461973288062,2.24528075546459,1.28139149255701,3.07024349440022,1.12597744800525,5.93672265779964,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,18.5072703228347,0.270946437543853,1.50506932156456,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0.650060246036521,0,1.93341436584244,0.154048617114644,0,0.827019434907183,0.214840489736547,0.725083469571143,0.255679882248303,15.1354460599453,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,2.84741482246853,0,0.255897791311334,4.70732886837312,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0.286822704408103,2.06322986127554,0,0,0,0,0,1.04980416073495,0,0,0,1.69458841398202,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79049075631364,0,0,0,42.9740072527842,44.5447021248958,75.5615327164111,0,0,0,0,0,0.19924798825107,0.552567831062295,1.25966373927138,0,0,0,0,0,0,2.95930216910801,0,0,0,0,0,0,0,6.52499617891314,0,0,3.07303986298317,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,1.52587995496613,4.0199527611143,25.5200927785536,6.68662431833595,49.572234169733,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0.995261931078505,1.85760885457012,2.4441205797345,0,0,0,0,26.48506236086,0,0,0,0,0.789168805698781,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,1.55182426381471,0,5.87549926029384,0,0,0,0.195551382734803,0,0,40.5613507451724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02708322290058,3.66656678418694,22.971936786458,2.99518500748487,5.57993862577542,6.02562935093056,5.1059439089912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12775409707835,5.77000469484979,0,0,0,4.2881719582402,13.9039313776741,0.25426853765475,0,0,0.326587360109409,0,0,0,0,0.732761168390412,19.8760333368332,0,0,0,0,0.961086713109252,35.3709686474248,0,0,0,0,0.638341257770182,1.63205341010842,3.2589686222951,2.14441903734423,0.327872630709804,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99047944349308,12.8008884692209,0.343395705182793,1.6837474438296,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.16510896871795,0,0.218419276384028,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0.353909170043221,0.183428598521679,9.01100195972638,0,0,0,0.82731361184183,0,0,9.42864100133121,0,2.80926563812386,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,11.4426057509804,0,0.342976018874837,0,0,0,0,1.02041020705668,0,2.24217730651031,3.65263488203798,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,2.97838929107265,0,0,0,0,0,7.12171720906684,8.5210129690685,10.4383298820438,2.91426595835484,0,0,0,0,0,0,0.231522474323834,1.96703604453562,0,0.245148321753905,1.88541237681301,0,0,1.2679671827502,0,1.69171052363736,2.51385763096951,0,0.357107877211315,0,0,3.65168194123259,0,0,0,0,0,4.2322147241232,0.371995018166751,0,6.48939843185684,0,0,0,0,0,0,0,1.06090177505535,0,0,0,9.38229520364316,4.99935306073855,0.258355639344024,1.1794195716213,0,0.445530107947154,2.62752345645685,5.660635445321,41.0679961302337,6.19638887734205,0.78894425931944,7.31852784401229,0,0,0,0,4.6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| ||
|short_description=p13@H19 | |||
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Latest revision as of 06:29, 17 September 2015
Short description: | p13@H19 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 0bp_to_ENST00000442037_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.91e-17 | 19 |
placental epithelial cell | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.14e-19 | 14 |
membranous layer | 7.14e-19 | 14 |
extraembryonic structure | 4.15e-17 | 24 |
larynx | 4.19e-17 | 9 |
upper respiratory tract | 9.51e-17 | 19 |
chorion | 1.41e-13 | 7 |
subdivision of digestive tract | 2.25e-09 | 118 |
organ component layer | 3.87e-09 | 66 |
foregut | 5.10e-09 | 87 |
placenta | 1.39e-08 | 4 |
allantois | 1.39e-08 | 4 |
endoderm-derived structure | 1.59e-08 | 160 |
endoderm | 1.59e-08 | 160 |
presumptive endoderm | 1.59e-08 | 160 |
amnion | 1.84e-07 | 7 |
segment of respiratory tract | 3.99e-07 | 47 |
digestive system | 5.21e-07 | 145 |
digestive tract | 5.21e-07 | 145 |
primitive gut | 5.21e-07 | 145 |