FFCP PHASE1:Hg19::chr11:61734754..61734779,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:61734754..61734779,+ to FFCP PHASE1:Hg19::chr11:61734754..61734779,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=399900 | |EntrezGene=399900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q8N204 | |UniProt=Q8N204 | ||
|association_with_transcript=-486bp_to_AK093779,AX748301_5end | |||
|cluster_id=chr11:61734754..61734779,+ | |||
|description=CAGE_peak_1_at_LOC399900_5end | |||
|id=chr11:61734754..61734779,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.14e-19!140;CL:0000037!4.56e-15!172;CL:0000566!4.56e-15!172;CL:0002031!4.78e-15!124;CL:0002032!1.37e-13!165;CL:0000837!1.37e-13!165;CL:0002087!2.80e-13!119;CL:0000988!4.21e-13!182;CL:0000838!8.62e-10!52;CL:0000542!2.63e-09!53;CL:0000051!2.63e-09!53;CL:0000860!9.94e-09!45;CL:0002057!1.37e-08!42;CL:0000766!4.44e-08!76;CL:0000791!7.30e-08!18;CL:0000789!7.30e-08!18;CL:0002420!7.30e-08!18;CL:0002419!7.30e-08!18;CL:0000790!7.30e-08!18;CL:0000236!9.21e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.25e-10;18!CL:0000789;7.25e-10;18!CL:0002419;7.25e-10;18!CL:0000625;4.80e-09;11!CL:0000236;4.86e-09;13!CL:0000094;8.65e-09;8!CL:0000775;5.44e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.86e-12,136;CL:0000791,8.81e-10,18;CL:0000789,8.81e-10,18;CL:0002420,8.81e-10,18;CL:0002419,8.81e-10,18;CL:0000790,8.81e-10,18;CL:0000037,2.73e-09,168;CL:0000625,5.47e-09,11;CL:0002031,7.09e-09,120;CL:0000094,7.21e-09,8;CL:0000236,1.46e-08,14;CL:0000838,1.83e-08,52;CL:0000988,2.63e-08,177;CL:0000542,3.22e-08,53;CL:0000051,3.22e-08,53;CL:0002032,3.87e-08,161;CL:0000837,3.87e-08,161;CL:0002087,4.99e-08,115;CL:0000775,3.52e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;7.25e-10;18!UBERON:0006215;1.02e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.67e-22!115;UBERON:0002390!4.11e-08!102;UBERON:0003061!4.11e-08!102;UBERON:0001049!1.49e-07!57;UBERON:0005068!1.49e-07!57;UBERON:0006241!1.49e-07!57;UBERON:0007135!1.49e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.86e-12;15!UBERON:0000179;6.86e-12;15!UBERON:0000463;6.86e-12;15!UBERON:0003296;3.26e-09;4!UBERON:0010133;3.26e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.20e-14,114;UBERON:0000178,2.59e-12,15;UBERON:0000179,2.59e-12,15;UBERON:0000463,2.59e-12,15;UBERON:0003296,2.48e-09,4;UBERON:0010133,2.48e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0.382067028739756,0.0821005894499457,0.393553906568396,1.18009283054671,0.767658796194425,0.619264493264304,0,0,0,0.309868802321207,0.142169232487422,0.587200878669695,1.66198622559563,0.601633342410425,1.51907609501096,0,0,0,0.436194716338694,0.755751887377619,0.727752183563449,0.464858073811369,0.822335776043652,0.619412741790207,0.575384784644301,0.256160706529101,0.236482229888585,0.689491361473237,0,1.35426486594342,0.376484679085209,0,0.449446968890169,1.22433556948361,0.320929027076094,0,1.31940520074686,0.797854630486527,1.70489900213078,1.16083695451434,0.56738522469114,0.622822248995575,1.25624332628372,1.0429658368404,0,0,0.368277635987565,0.632924774881769,0,1.06302149982522,0.209658645508376,0.561643155732475,0.300353785683013,0.32145117339416,0.855038231223746,0.19891667719909,0.730656615058536,1.75996244461323,2.73069305631066,1.77901850772711,0.853460445133014,2.80277190925209,3.4485146397269,3.96626923670917,6.67837628174755,0.569212969109448,1.17447437874188,0.382273228125229,1.32171328579026,0,0.263384084775077,0.590129310341499,1.17903228824749,0.411202997999018,2.34061093546949,2.93330039970231,1.4203434172042,3.89653456815823,1.11410456885174,1.17842362989935,1.32920336750173,1.62482318259009,1.15282187753108,1.1705341280389,1.64437904603676,0.276350017785848,0.579606171470105,1.77943875794473,2.40786745280742,3.1360657141493,1.58633079776593,0.383220493601921,2.06176467289578,0,3.18565414324097,2.60433381542567,3.8018081777935,2.55977702432214,2.04778577847069,0,2.13099526839615,4.92676798152628,0.403213486449465,0.534880391567015,0.579297615531196,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0.72038491523742,0,0,0,0.174129737299267,0.26591592103773,0,1.14398982156026,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,11.6334079244498,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.352303495931295,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0.252433774244115,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0.243947412259191,0.530119073285941,0.464775771478074,0.207322110030741,0.252320850875628,1.09493207722749,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.220587945464788,0,0,0.808987848960987,0.392442930250692,0,0,0,0,0,2.53510069643662,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0.297262324577456,0,0,0.141775097242386,0,0.290633938513962,0,0,0.352193736052904,0.621984346622316,1.58531948758658,1.13618190083742,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,2.10833939483032,0.239624855491583,0,0,0,0.205476322550383,0,0.112085143993527,0.985153801009636,0.215627574859517,0.385029108839245,0,0,0.773288812777695,0.167516265334349,1.91381625495949,1.49801404789436,2.99161459204025,4.55857064779639,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,1.6541442089831,1.72571360654893,0.320182673410333,0.303127571446259,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0.604297247958111,0.200506470303285,0.276242966807689,0,0,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,3.72741790298089,3.13722541229881,0,0,0,0.824328093181778,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,0.376575203107117,0,0,0.886860307073351,0,2.53723804616085,2.29391162142713,3.98753031021914,2.38231775457789,4.11362273086194,4.53931317834902,1.62009431171434,1.58625035258854,0.106824071127473,0,0.490080431962063,0,0.144269212976445,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0.425846237690326,0.343505344755765,0.614481528616916,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0.586032717087576,0.728163130497081,0.557216921387392,0,0.47748896947538,0.296964680832639,1.22864280839693,0,0.844016498463076,0.111308705022906,0,1.05562704063997,0.996239941255349,0.828851746593443,0.755798243562828,0,0.246169610922139,0,0,0.537063524026827,0.511572370226872,0.887790650732402,0,0,0.969332746095218,0.278304294485554,0,0.260427761085233,0.437299999980979,2.17499872630438,0.455173793141999,0,0.236387681767936,0,0,0.520874984799877,0,1.32656082487949,10.6807215421958,12.3848771122972,2.65992857058193,0.438770794307945,0.32681539055697,0.278847488557207,1.00035336054936,0,0,0.0897576444097721,0.217294743844016,0.31900115973192,0,0,0,0,0,0.902382642468723,0.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| 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| ||
|short_description=p1@LOC399900 | |||
}} | }} |
Latest revision as of 17:51, 18 September 2015
Short description: | p1@LOC399900 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC399900_5end |
Coexpression cluster: | NA |
Association with transcript: | -486bp_to_AK093779, AX748301_5end |
EntrezGene: | LOC399900 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.86e-12 | 136 |
mature alpha-beta T cell | 8.81e-10 | 18 |
alpha-beta T cell | 8.81e-10 | 18 |
immature T cell | 8.81e-10 | 18 |
mature T cell | 8.81e-10 | 18 |
immature alpha-beta T cell | 8.81e-10 | 18 |
hematopoietic stem cell | 2.73e-09 | 168 |
CD8-positive, alpha-beta T cell | 5.47e-09 | 11 |
hematopoietic lineage restricted progenitor cell | 7.09e-09 | 120 |
granulocyte | 7.21e-09 | 8 |
B cell | 1.46e-08 | 14 |
lymphoid lineage restricted progenitor cell | 1.83e-08 | 52 |
hematopoietic cell | 2.63e-08 | 177 |
lymphocyte | 3.22e-08 | 53 |
common lymphoid progenitor | 3.22e-08 | 53 |
hematopoietic oligopotent progenitor cell | 3.87e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.87e-08 | 161 |
nongranular leukocyte | 4.99e-08 | 115 |
neutrophil | 3.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.20e-14 | 114 |
blood | 2.59e-12 | 15 |
haemolymphatic fluid | 2.59e-12 | 15 |
organism substance | 2.59e-12 | 15 |
gland of diencephalon | 2.48e-09 | 4 |
neuroendocrine gland | 2.48e-09 | 4 |