FFCP PHASE1:Hg19::chr11:65837212..65837244,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:65837212..65837244,+ to FFCP PHASE1:Hg19::chr11:65837212..65837244,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:65837212..65837244,+ | |||
|description=CAGE_peak_at_chr11:65837212..65837244,+ | |||
|id=chr11:65837212..65837244,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.37e-16!180;CL:0000057!3.14e-12!75;CL:0002371!9.31e-12!591;CL:0000144!2.37e-11!625;CL:0002620!9.02e-10!23;CL:0000048!1.11e-09!430;CL:0000723!4.15e-09!436;CL:0000548!5.42e-09!679;CL:0000004!5.42e-09!679;CL:0000255!5.42e-09!679;CL:0000012!9.71e-09!682;CL:0000034!1.06e-08!444;CL:0000680!2.53e-07!57;CL:0000056!2.53e-07!57;CL:0000355!2.53e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000632;2.57e-11;3!CL:0000214;3.89e-11;3!CL:0002615;6.00e-11;3!CL:0000511;2.71e-09;1!CL:0002625;2.71e-09;1!CL:0000216;2.71e-09;1!CL:0002581;7.85e-09;1!CL:0002620;1.52e-08;23!CL:0000327;2.12e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,2.04e-11,3;CL:0000214,3.99e-11,3;CL:0002615,7.74e-11,3;CL:0000511,2.82e-09,1;CL:0002625,2.82e-09,1;CL:0000216,2.82e-09,1;CL:0002581,7.27e-09,1;CL:0000057,1.15e-08,76;CL:0002620,1.51e-08,23;CL:0000327,1.96e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!9.11e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3571;7.85e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,5.75e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000486!1.60e-07!82;UBERON:0000914!1.75e-07!83;UBERON:0002329!1.75e-07!83;UBERON:0003077!1.75e-07!83;UBERON:0003059!1.75e-07!83;UBERON:0007282!1.75e-07!83;UBERON:0009618!1.75e-07!83;UBERON:0007285!1.75e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.18e-13;9!UBERON:0000042;1.18e-13;9!UBERON:0006915;3.89e-11;3!UBERON:0007616;3.89e-11;3!UBERON:0002217;3.89e-11;3!UBERON:0002018;3.89e-11;3!UBERON:0001136;2.71e-09;1!UBERON:0001343;2.71e-09;1!UBERON:0004910;2.71e-09;1!UBERON:0004813;2.71e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,3.99e-11,3;UBERON:0007616,3.99e-11,3;UBERON:0002217,3.99e-11,3;UBERON:0002018,3.99e-11,3;UBERON:0004457,3.14e-10,12;UBERON:0000042,3.14e-10,12;UBERON:0001136,2.82e-09,1;UBERON:0001343,2.82e-09,1;UBERON:0004910,2.82e-09,1;UBERON:0005154,2.82e-09,1;UBERON:0005295,2.82e-09,1;UBERON:0004813,2.82e-09,1;UBERON:0005297,2.82e-09,1;UBERON:0005294,2.82e-09,1;UBERON:0010141,2.82e-09,1;UBERON:0005891,2.82e-09,1 | |||
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Latest revision as of 00:56, 24 July 2015
Short description: | p@chr11:65837212..65837244, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65837212..65837244, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 2.04e-11 | 3 |
synovial cell | 3.99e-11 | 3 |
adipocyte of omentum tissue | 7.74e-11 | 3 |
androgen binding protein secreting cell | 2.82e-09 | 1 |
seminiferous tubule epithelial cell | 2.82e-09 | 1 |
Sertoli cell | 2.82e-09 | 1 |
perirenal preadipocyte | 7.27e-09 | 1 |
fibroblast | 1.15e-08 | 76 |
skin fibroblast | 1.51e-08 | 23 |
extracellular matrix secreting cell | 1.96e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 3.99e-11 | 3 |
layer of synovial tissue | 3.99e-11 | 3 |
synovial joint | 3.99e-11 | 3 |
synovial membrane of synovial joint | 3.99e-11 | 3 |
cavity lining | 3.14e-10 | 12 |
serous membrane | 3.14e-10 | 12 |
mesothelium | 2.82e-09 | 1 |
seminiferous tubule of testis | 2.82e-09 | 1 |
epithelium of male gonad | 2.82e-09 | 1 |
epithelial cord | 2.82e-09 | 1 |
sex cord | 2.82e-09 | 1 |
seminiferous tubule epithelium | 2.82e-09 | 1 |
testis sex cord | 2.82e-09 | 1 |
genital ridge | 2.82e-09 | 1 |
primitive sex cord of indifferent gonad | 2.82e-09 | 1 |
coelomic epithelium | 2.82e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 5.75e-09 | 1 |