FFCP PHASE1:Hg19::chr11:69466307..69466329,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:69466307..69466329,+ to FFCP PHASE1:Hg19::chr11:69466307..69466329,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:69466307..69466329,+ | |||
|coexpression_cluster_id=C807 | |||
|description=CAGE_peak_at_chr11:69466307..69466329,+ | |||
|id=chr11:69466307..69466329,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.12e-20!180;CL:0000220!1.88e-16!246;CL:0002321!2.32e-16!248;CL:0000057!1.24e-12!75;CL:0000192!1.90e-12!42;CL:0000514!1.90e-12!42;CL:0000548!7.28e-12!679;CL:0000004!7.28e-12!679;CL:0000255!7.28e-12!679;CL:0000066!2.74e-11!254;CL:0000012!2.88e-11!682;CL:0000359!3.07e-11!32;CL:0000680!5.22e-10!57;CL:0000056!5.22e-10!57;CL:0000355!5.22e-10!57;CL:0000222!8.37e-10!119;CL:0000183!1.94e-09!59;CL:0000144!3.35e-09!625;CL:0000187!8.99e-09!54;CL:0000393!2.07e-07!60;CL:0000211!2.07e-07!60;CL:0002371!7.34e-07!591;CL:0000075!8.57e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.91e-11;32!CL:0002334;1.46e-08;12!CL:0000192;5.24e-08;43!CL:0002595;1.02e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.77e-12,32;CL:0000192,2.68e-10,43;CL:0000514,2.68e-10,43;CL:0002334,1.06e-08,12;CL:0000680,2.20e-08,58;CL:0000056,2.20e-08,58;CL:0000355,2.20e-08,58;CL:0000057,3.65e-08,76;CL:0002595,9.49e-08,5;CL:0002539,8.47e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;5.24e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;6.71e-10;14!DOID:120;8.14e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.20e-10,14;DOID:120,6.46e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0005256!8.69e-13!143;UBERON:0001637!1.01e-12!42;UBERON:0003509!1.01e-12!42;UBERON:0004572!1.01e-12!42;UBERON:0002100!2.32e-11!216;UBERON:0000914!3.43e-11!83;UBERON:0002329!3.43e-11!83;UBERON:0003077!3.43e-11!83;UBERON:0003059!3.43e-11!83;UBERON:0007282!3.43e-11!83;UBERON:0009618!3.43e-11!83;UBERON:0007285!3.43e-11!83;UBERON:0000055!1.53e-10!69;UBERON:0004573!2.25e-10!33;UBERON:0004571!2.25e-10!33;UBERON:0000486!3.99e-10!82;UBERON:0003914!4.43e-10!118;UBERON:0000475!4.74e-10!365;UBERON:0000468!5.97e-10!659;UBERON:0003102!1.18e-09!95;UBERON:0002049!1.28e-09!79;UBERON:0007798!1.28e-09!79;UBERON:0004290!1.60e-09!70;UBERON:0000490!2.89e-09!138;UBERON:0001981!2.97e-09!60;UBERON:0007500!2.97e-09!60;UBERON:0004537!2.97e-09!60;UBERON:0006965!2.97e-09!60;UBERON:0001134!8.10e-09!61;UBERON:0002036!8.10e-09!61;UBERON:0003082!8.10e-09!61;UBERON:0002385!5.61e-08!63;UBERON:0001015!5.61e-08!63;UBERON:0000383!5.61e-08!63;UBERON:0004872!1.48e-07!84;UBERON:0002199!1.51e-07!45;UBERON:0002416!1.51e-07!45;UBERON:0000119!1.90e-07!312;UBERON:0000483!3.73e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.55e-08;33!UBERON:0004571;1.55e-08;33!UBERON:0003834;1.02e-07;5!UBERON:0001533;1.02e-07;5!UBERON:0003513;2.33e-07;7!UBERON:0002118;6.93e-07;5!UBERON:0001637;9.98e-07;42!UBERON:0003509;9.98e-07;42!UBERON:0004572;9.98e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.77e-10,42;UBERON:0003509,1.77e-10,42;UBERON:0004572,1.77e-10,42;UBERON:0004573,2.13e-09,33;UBERON:0004571,2.13e-09,33;UBERON:0007524,1.01e-08,73;UBERON:0002329,2.32e-08,71;UBERON:0003059,2.32e-08,71;UBERON:0007282,2.32e-08,71;UBERON:0004290,2.32e-08,71;UBERON:0009618,2.32e-08,71;UBERON:0007503,3.90e-08,78;UBERON:0003077,3.91e-08,72;UBERON:0007285,3.91e-08,72;UBERON:0000055,5.30e-08,68;UBERON:0003834,9.49e-08,5;UBERON:0001533,9.49e-08,5;UBERON:0003513,1.96e-07,7;UBERON:0001134,2.12e-07,62;UBERON:0002036,2.12e-07,62;UBERON:0003082,2.12e-07,62;UBERON:0002118,4.79e-07,5;UBERON:0002385,5.84e-07,64;UBERON:0001015,5.84e-07,64;UBERON:0000383,5.84e-07,64;UBERON:0004237,8.47e-07,10;UBERON:0004695,8.47e-07,10;UBERON:0002111,8.47e-07,10;UBERON:0004178,8.47e-07,10 | |||
|phase1_expression=0.726713517082227,2.35510576280081,0,4.00293193412522,0,0.872338524100369,2.53299878168311,1.26343974685366,0.261185628199839,0.982935746006035,0.697801167972428,0.873765488520689,1.84636884759917,0.495065411840187,1.65698687863958,6.05092631806598,3.61616716814386,3.65155045193687,5.85519358548608,0.246242116153576,0.612002073732759,0.313454721478088,0.286235987131057,0.410623275218653,0.376627918784408,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.01392563272577,0,1.94653948121054,0.283604451492204,1.55210578223795,0.351339142772504,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0,0.825354125820202,0.835979866147242,1.29208379584664,0.71153252537342,0,0,0,0.732186172644509,0.367663080345869,0.81014194788176,0.446498641420399,0.44905874525234,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0,0,1.2663051166458,1.58891016975863,0.860509862246441,1.41867352879343,0.560677600142307,1.06748995729705,1.97334038733728,0,0.404132016209064,0.326923806226917,0,0,0,2.49728061464256,1.1409436430889,1.34503812496621,0,0.323745888736263,0.140450806702248,0.61246251376468,1.84251475967652,0.309977343527296,0,3.21447008062124,1.82032272387605,0.718618141816238,0.673344455816265,0.375355559615893,0.277064115484183,0,2.14541457059314,1.05166641234618,0.794025282120147,1.4351170855109,1.2813443329114,0.635795703478686,0.300091096084402,0.412210116953756,1.28820270022815,0.744467425326359,1.18143432568886,0.974370051611986,0.504867548488229,0.828449087780694,0.969876340912871,1.06502877754984,1.5112814734146,0.67824236924195,0.57978255948989,0.545492241181669,0.286804595389004,0.121973706129595,0.132529768321485,0.232387885739037,0.310983165046111,0.504641701751257,0.72995471815166,0,0.643240938192885,4.14404764057442,6.03678306441573,4.33127689001751,0.118306800039844,0.674338760312407,0.241011029883482,0.772057809126758,0,0,0,0,0,0,2.80483547606892,0.4115740113314,0,0,0,0,0,0.245976877086227,0.857839051492628,1.31700342490351,0,0.301586917234893,0.555530670951178,0.325808305310325,0,4.3299402607582,0.811512834825538,0.352226082707465,1.73239737313289,1.38895653772983,1.90254152234598,5.53143078571493,0.858486162094873,0,0.234004265139238,0.445893486866185,0.93733833986777,1.84780341018745,0.567100388969546,0.179117045405697,0.871901815541886,0.766765358330422,0,0,0,0,0,1.33345578013555,0.763976851116555,1.17217447210047,1.71072446022705,2.87916979569306,5.1058319833466,2.85826432630578,0.224262168690721,0.87192013766656,0.66004457238855,0.646358578788889,0,0.845302752556,1.59562869950922,4.16029747645464,0.257207374262142,0,0.799266537048298,0.57191197463259,1.08524321078289,0,0,0.710783897485092,0.791951872933429,0.904318131178758,0,0.699810938274399,0,0,0,1.19812427745791,0,0,3.76431397335706,2.67119219315498,1.07436577943937,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,1.03985430765404,3.56857977594324,0.473107245101804,0.234282829985426,0,0,0,0.664225598535437,0.553107505625109,2.43274120510632,0.391602314925481,0.343143423810856,0,0,0,0.606255142892519,1.66435439510497,0,0.744323423456331,1.53461973288062,3.36792113319688,0.768834895534206,3.07024349440022,2.41280881715411,1.48418066444991,1.54209693802656,2.13074070375753,1.06765302817952,1.55776328755086,1.97557643381931,0.604297247958111,2.00506470303285,0.460404944679482,0.918515585316854,3.45973219212762,1.18011973463482,0.902399225814824,2.31046011313244,0,2.92278449306521,1.16106791782163,0,0.680374821106063,1.0795795805107,0,1.35473218771926,0.501689773854853,1.78413391131527,3.3243040357149,0.223874754722178,0,0,2.3080511260475,1.64007322849853,0,0,0,0,0,3.25030123018261,0,0.48335359146061,0,0.307007349452259,0.551346289938122,0,0.290033387828457,0.255679882248303,0.178064071293475,0.495854746082934,0.576570202095319,0.127612712494584,0.2023155617111,9.29691098594571,2.51849877464512,0,0.924100740528266,0.532306030317022,1.73986598415015,1.66791797193528,0,0,0.316379424718726,0.762520775695299,2.303080121802,0.42793898803392,0.95460974377781,2.35484592059769,0.359744915166629,0.823611089208164,0.824686816419805,0.606547444719948,4.75530963519025,0.842516912477962,0,4.14312932373184,3.16950440270266,0.545999645631943,1.27264888758341,3.39024349860728,1.65409603063837,5.30751180192976,5.69986150829892,2.31510213706675,0.655894752046633,0.811641507850816,3.0982349809975,4.7888252430481,0.717056761020258,0.392996164052485,1.426684205925,0.354761064070598,0.844430541190656,0,0,0,0.288666338176536,0,0,0.282431402330337,0.86101074534246,1.68471475667626,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,1.22520107990516,2.22963810150862,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0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| ||
|short_description=p@chr11:69466307..69466329,+ | |||
}} | }} |
Latest revision as of 01:58, 24 July 2015
Short description: | p@chr11:69466307..69466329, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:69466307..69466329, + |
Coexpression cluster: | C807_neuroectodermal_renal_leiomyoma_Smooth_neuroblastoma_Aortic_Melanocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.77e-12 | 32 |
smooth muscle cell | 2.68e-10 | 43 |
smooth muscle myoblast | 2.68e-10 | 43 |
preadipocyte | 1.06e-08 | 12 |
muscle precursor cell | 2.20e-08 | 58 |
myoblast | 2.20e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.20e-08 | 58 |
fibroblast | 3.65e-08 | 76 |
smooth muscle cell of the subclavian artery | 9.49e-08 | 5 |
aortic smooth muscle cell | 8.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
artery | 1.77e-10 | 42 |
arterial blood vessel | 1.77e-10 | 42 |
arterial system | 1.77e-10 | 42 |
systemic artery | 2.13e-09 | 33 |
systemic arterial system | 2.13e-09 | 33 |
dense mesenchyme tissue | 1.01e-08 | 73 |
somite | 2.32e-08 | 71 |
presomitic mesoderm | 2.32e-08 | 71 |
presumptive segmental plate | 2.32e-08 | 71 |
dermomyotome | 2.32e-08 | 71 |
trunk paraxial mesoderm | 2.32e-08 | 71 |
epithelial vesicle | 3.90e-08 | 78 |
paraxial mesoderm | 3.91e-08 | 72 |
presumptive paraxial mesoderm | 3.91e-08 | 72 |
vessel | 5.30e-08 | 68 |
thoracic segment blood vessel | 9.49e-08 | 5 |
subclavian artery | 9.49e-08 | 5 |
trunk blood vessel | 1.96e-07 | 7 |
skeletal muscle tissue | 2.12e-07 | 62 |
striated muscle tissue | 2.12e-07 | 62 |
myotome | 2.12e-07 | 62 |
right ovary | 4.79e-07 | 5 |
muscle tissue | 5.84e-07 | 64 |
musculature | 5.84e-07 | 64 |
musculature of body | 5.84e-07 | 64 |
blood vessel smooth muscle | 8.47e-07 | 10 |
arterial system smooth muscle | 8.47e-07 | 10 |
artery smooth muscle tissue | 8.47e-07 | 10 |
aorta smooth muscle tissue | 8.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.20e-10 | 14 |
female reproductive organ cancer | 6.46e-07 | 27 |