FFCP PHASE1:Hg19::chr11:84431432..84431459,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr11:84431432..84431459,+ to FFCP PHASE1:Hg19::chr11:84431432..84431459,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-409bp_to_ENST00000534275_5end | |||
|cluster_id=chr11:84431432..84431459,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_1_at_ENST00000534275_5end | |||
|id=chr11:84431432..84431459,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.00e-45!32;UBERON:0002780!3.30e-45!41;UBERON:0001890!3.30e-45!41;UBERON:0006240!3.30e-45!41;UBERON:0003080!5.44e-44!42;UBERON:0001893!9.41e-43!34;UBERON:0002791!2.19e-40!33;UBERON:0002020!4.64e-39!34;UBERON:0003528!4.64e-39!34;UBERON:0002619!1.88e-36!22;UBERON:0007023!3.14e-36!115;UBERON:0001049!2.69e-33!57;UBERON:0005068!2.69e-33!57;UBERON:0006241!2.69e-33!57;UBERON:0007135!2.69e-33!57;UBERON:0002616!6.06e-32!59;UBERON:0000956!9.94e-32!25;UBERON:0000203!9.94e-32!25;UBERON:0001950!7.57e-31!20;UBERON:0001017!9.10e-31!82;UBERON:0000955!1.16e-30!69;UBERON:0006238!1.16e-30!69;UBERON:0005743!5.52e-29!86;UBERON:0003056!2.39e-28!61;UBERON:0000073!2.44e-27!94;UBERON:0001016!2.44e-27!94;UBERON:0003075!2.74e-23!86;UBERON:0007284!2.74e-23!86;UBERON:0002346!6.24e-22!90;UBERON:0000153!2.04e-18!129;UBERON:0007811!2.04e-18!129;UBERON:0001872!1.79e-16!5;UBERON:0000033!2.21e-15!123;UBERON:0000369!1.21e-13!4;UBERON:0002435!1.21e-13!4;UBERON:0000204!1.21e-13!4;UBERON:0010082!1.21e-13!4;UBERON:0004121!9.37e-13!169;UBERON:0002420!2.46e-12!9;UBERON:0007245!2.46e-12!9;UBERON:0010009!2.46e-12!9;UBERON:0010011!2.46e-12!9;UBERON:0000454!2.46e-12!9;UBERON:0000924!2.81e-12!173;UBERON:0006601!2.81e-12!173;UBERON:0000200!4.35e-12!6;UBERON:0009663!1.71e-11!7;UBERON:0005383!6.34e-11!3;UBERON:0005382!6.34e-11!3;UBERON:0000349!1.48e-10!5;UBERON:0002771!2.14e-09!3;UBERON:0001871!2.79e-09!7;UBERON:0002308!7.36e-09!9;UBERON:0000125!7.36e-09!9;UBERON:0001873!5.98e-08!2;UBERON:0010122!5.98e-08!2;UBERON:0001954!8.09e-08!2;UBERON:0003022!8.09e-08!2;UBERON:0002421!8.09e-08!2;UBERON:0002600!8.09e-08!2;UBERON:0000007!1.20e-07!2;UBERON:0002360!5.95e-07!2;UBERON:0000094!5.95e-07!2;UBERON:0007645!5.95e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.68e-99;2!UBERON:0005058;5.68e-99;2!UBERON:0009113;5.68e-99;2!UBERON:0004177;1.81e-40;5!UBERON:0005057;1.81e-40;5!UBERON:0001872;3.42e-11;5!UBERON:0000077;1.98e-08;27!UBERON:0002405;1.98e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.11e-50,4;UBERON:0005058,3.11e-50,4;UBERON:0009113,3.11e-50,4;UBERON:0003295,3.11e-50,4;UBERON:0005562,3.11e-50,4;UBERON:0003351,5.98e-34,6;UBERON:0004177,2.74e-29,7;UBERON:0005057,2.74e-29,7;UBERON:0000974,6.99e-21,10;UBERON:0003408,6.99e-21,10;UBERON:0001042,6.99e-21,10;UBERON:0009145,6.99e-21,10;UBERON:0006562,4.28e-19,11;UBERON:0009722,4.28e-19,11;UBERON:0007690,4.28e-19,11;UBERON:0008814,4.07e-12,18;UBERON:0001557,1.55e-11,19;UBERON:0001872,3.26e-11,5;UBERON:0004807,3.65e-08,28;UBERON:0000077,6.44e-08,29;UBERON:0002368,9.98e-07,35 | |||
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| ||
|short_description=p1@ENST00000534275 | |||
}} | }} |
Latest revision as of 03:09, 24 July 2015
Short description: | p1@ENST00000534275 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000534275_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -409bp_to_ENST00000534275_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.11e-50 | 4 |
hemolymphoid system gland | 3.11e-50 | 4 |
thymic region | 3.11e-50 | 4 |
pharyngeal gland | 3.11e-50 | 4 |
thymus primordium | 3.11e-50 | 4 |
pharyngeal epithelium | 5.98e-34 | 6 |
hemopoietic organ | 2.74e-29 | 7 |
immune organ | 2.74e-29 | 7 |
neck | 6.99e-21 | 10 |
gland of gut | 6.99e-21 | 10 |
chordate pharynx | 6.99e-21 | 10 |
pharyngeal region of foregut | 6.99e-21 | 10 |
pharynx | 4.28e-19 | 11 |
entire pharyngeal arch endoderm | 4.28e-19 | 11 |
early pharyngeal endoderm | 4.28e-19 | 11 |
pharyngeal arch system | 4.07e-12 | 18 |
upper respiratory tract | 1.55e-11 | 19 |
parietal lobe | 3.26e-11 | 5 |
respiratory system epithelium | 3.65e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 6.44e-08 | 29 |
endocrine gland | 9.98e-07 | 35 |