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FFCP PHASE1:Hg19::chr12:6233757..6233771,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:6233757..6233771,-
|DHSsupport=supported 
|short_description=p4@VWF
|DPIdataset=robust
|description=CAGE_peak_4_at_VWF_5end
|association_with_transcript=59bp_to_ENST00000540192_5end
|EntrezGene=7450
|EntrezGene=7450
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=12726
|HGNC=12726
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=59bp_to_ENST00000540192_5end
|cluster_id=chr12:6233757..6233771,-
|coexpression_cluster_id=C428
|description=CAGE_peak_4_at_VWF_5end
|id=chr12:6233757..6233771,-
|ontology_enrichment_celltype=CL:0002139!9.84e-30!24;CL:0000115!1.95e-27!35;CL:0000071!3.47e-22!18;CL:0002546!3.47e-22!18;CL:0002078!2.01e-19!44;CL:0000213!1.58e-12!57;CL:0000215!1.58e-12!57;CL:1000413!1.66e-11!9;CL:0005020!4.26e-09!6;CL:0002138!4.26e-09!6;CL:0005022!4.26e-09!6;CL:0002543!1.17e-08!6;CL:0002544!2.70e-08!6
|ontology_enrichment_celltype_v019=CL:0002139;5.21e-34;24!CL:0000115;8.52e-28;36!CL:0000071;2.57e-25;18!CL:0002078;1.39e-15;45!CL:1000413;5.05e-13;9!CL:0000213;1.12e-10;58!CL:0000215;1.12e-10;58!CL:0002138;3.15e-10;6!CL:0002543;1.01e-09;6!CL:0002544;2.59e-09;6
|ontology_enrichment_celltype_v019_2=CL:0002139,5.44e-34,24;CL:0000115,6.41e-33,36;CL:0000071,2.70e-25,18;CL:0002546,2.70e-25,18;CL:0002078,4.99e-24,45;CL:0000213,3.30e-16,58;CL:0000215,3.30e-16,58;CL:1000413,5.32e-13,9;CL:0005020,3.13e-10,6;CL:0002138,3.13e-10,6;CL:0005022,3.13e-10,6;CL:0002543,1.00e-09,6;CL:0002544,2.61e-09,6
|ontology_enrichment_development_v019=CL:0002546;2.57e-25;18!CL:0005022;3.15e-10;6!UBERON:0004872;4.28e-07;7!UBERON:0006601;4.70e-07;82
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!1.69e-70!115;UBERON:0001049!6.25e-25!57;UBERON:0005068!6.25e-25!57;UBERON:0006241!6.25e-25!57;UBERON:0007135!6.25e-25!57;UBERON:0004111!6.43e-24!241;UBERON:0001986!3.47e-22!18;UBERON:0004638!3.47e-22!18;UBERON:0004852!3.47e-22!18;UBERON:0003080!1.29e-20!42;UBERON:0000477!2.49e-20!286;UBERON:0000025!4.70e-20!194;UBERON:0002616!5.35e-20!59;UBERON:0000955!9.71e-20!69;UBERON:0006238!9.71e-20!69;UBERON:0002780!1.27e-19!41;UBERON:0001890!1.27e-19!41;UBERON:0006240!1.27e-19!41;UBERON:0001017!4.59e-19!82;UBERON:0003075!1.25e-18!86;UBERON:0007284!1.25e-18!86;UBERON:0005743!1.33e-18!86;UBERON:0002346!4.20e-17!90;UBERON:0001893!6.60e-17!34;UBERON:0000487!7.32e-17!22;UBERON:0002020!1.25e-16!34;UBERON:0003528!1.25e-16!34;UBERON:0000073!3.28e-16!94;UBERON:0001016!3.28e-16!94;UBERON:0002791!3.55e-16!33;UBERON:0001869!1.54e-15!32;UBERON:0002619!7.32e-15!22;UBERON:0006914!5.06e-14!25;UBERON:0001950!1.86e-13!20;UBERON:0003056!8.81e-13!61;UBERON:0000956!2.11e-12!25;UBERON:0000203!2.11e-12!25;UBERON:0000055!9.78e-12!69;UBERON:0003915!1.66e-11!9;UBERON:0004700!1.66e-11!9;UBERON:0001917!1.66e-11!9;UBERON:0000153!2.61e-11!129;UBERON:0007811!2.61e-11!129;UBERON:0000483!6.51e-11!309;UBERON:0000119!1.48e-10!312;UBERON:0000033!5.35e-10!123;UBERON:0002465!1.30e-09!10;UBERON:0002049!6.55e-09!79;UBERON:0007798!6.55e-09!79;UBERON:0000468!1.48e-08!659;UBERON:0004121!2.70e-08!169;UBERON:0001473!4.91e-08!8;UBERON:0004536!4.91e-08!8;UBERON:0006558!4.91e-08!8;UBERON:0004872!5.00e-08!84;UBERON:0000467!6.79e-08!625;UBERON:0000480!8.13e-08!626;UBERON:0000064!8.55e-08!219;UBERON:0001981!8.96e-08!60;UBERON:0007500!8.96e-08!60;UBERON:0004537!8.96e-08!60;UBERON:0006965!8.96e-08!60;UBERON:0000924!9.33e-08!173;UBERON:0006601!9.33e-08!173;UBERON:0002298!1.46e-07!8;UBERON:0001009!1.53e-07!113;UBERON:0001638!4.16e-07!9;UBERON:0003920!4.16e-07!9;UBERON:0004582!4.16e-07!9;UBERON:0001871!7.56e-07!7
|ontology_enrichment_uberon_v019=UBERON:0004638;2.57e-25;18!UBERON:0001986;2.57e-25;18!UBERON:0004852;2.57e-25;18!UBERON:0000487;1.68e-19;22!UBERON:0007023;8.64e-17;114!UBERON:0006914;2.18e-16;25!UBERON:0001893;1.90e-13;34!UBERON:0003915;5.05e-13;9!UBERON:0004700;5.05e-13;9!UBERON:0001917;5.05e-13;9!UBERON:0003528;1.01e-12;34!UBERON:0002020;1.01e-12;34!UBERON:0002619;1.17e-12;22!UBERON:0002780;1.64e-12;41!UBERON:0001890;1.64e-12;41!UBERON:0001869;1.79e-12;32!UBERON:0002791;2.42e-12;32!UBERON:0001950;3.99e-11;20!UBERON:0000073;4.89e-11;53!UBERON:0002616;4.89e-11;53!UBERON:0000956;1.27e-10;25!UBERON:0000203;1.27e-10;25!UBERON:0000490;3.58e-10;33!UBERON:0002465;4.14e-09;10!UBERON:0001638;4.28e-08;9!UBERON:0003920;4.28e-08;9!UBERON:0004582;4.28e-08;9!UBERON:0001017;2.15e-07;75!UBERON:0001473;2.53e-07;8!UBERON:0004536;2.53e-07;8!UBERON:0006558;2.53e-07;8!UBERON:0000055;2.58e-07;65!UBERON:0000955;7.70e-07;68
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|short_description=p4@VWF
}}
}}

Latest revision as of 17:55, 19 September 2015

Short description:p4@VWF
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_VWF_5end
Coexpression cluster:C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast
Association with transcript: 59bp_to_ENST00000540192_5end
EntrezGene:VWF
HGNC: 12726
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data