FFCP PHASE1:Hg19::chr12:66563831..66563847,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:66563831..66563847,- to FFCP PHASE1:Hg19::chr12:66563831..66563847,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51643 | |EntrezGene=51643 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24257 | |HGNC=24257 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HC24 | |UniProt=Q9HC24 | ||
|association_with_transcript=4bp_to_ENST00000358230_5end | |||
|cluster_id=chr12:66563831..66563847,- | |||
|description=CAGE_peak_3_at_TMBIM4_5end | |||
|id=chr12:66563831..66563847,- | |||
|ontology_enrichment_celltype=CL:0000048!8.56e-13!430;CL:0000723!5.68e-12!436;CL:0000034!1.74e-11!444;CL:0000055!9.15e-11!180;CL:0002371!1.56e-10!591;CL:0000144!3.01e-09!625;CL:0000183!1.36e-07!59;CL:0000499!1.69e-07!27;CL:0000680!2.59e-07!57;CL:0000056!2.59e-07!57;CL:0000355!2.59e-07!57;CL:0000393!5.59e-07!60;CL:0000211!5.59e-07!60;CL:0000187!5.61e-07!54;CL:0000192!6.09e-07!42;CL:0000514!6.09e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000499;4.71e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.91e-16,427;CL:0000723,2.83e-15,433;CL:0000034,2.95e-14,441;CL:0000499,1.03e-08,28;CL:0002320,1.57e-08,361;CL:0000134,1.97e-08,354;CL:0000219,7.28e-08,386;CL:0000473,2.81e-07,48;CL:0000234,2.81e-07,48;CL:0002194,6.13e-07,59;CL:0000576,6.13e-07,59;CL:0000040,6.13e-07,59;CL:0000559,6.13e-07,59;CL:0000136,6.24e-07,15;CL:0000680,6.37e-07,58;CL:0000056,6.37e-07,58;CL:0000355,6.37e-07,58;CL:0000192,9.31e-07,43;CL:0000514,9.31e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.85e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.96e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.02e-08,14;DOID:193,8.78e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0002204!3.56e-12!167;UBERON:0000926!4.31e-10!448;UBERON:0004120!4.31e-10!448;UBERON:0006603!4.31e-10!448;UBERON:0000468!3.25e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.74e-07;9!UBERON:0000042;7.74e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.63e-13,167;UBERON:0000926,1.82e-12,315;UBERON:0004120,1.82e-12,315;UBERON:0006603,1.82e-12,315;UBERON:0002384,7.20e-09,371;UBERON:0001434,1.40e-07,100;UBERON:0004765,4.88e-07,90;UBERON:0000486,5.81e-07,83 | |||
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| ||
|short_description=p3@TMBIM4 | |||
}} | }} |
Latest revision as of 00:17, 20 September 2015
Short description: | p3@TMBIM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMBIM4_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000358230_5end |
EntrezGene: | TMBIM4 |
HGNC: | 24257 |
UniProt: | Q9HC24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.91e-16 | 427 |
somatic stem cell | 2.83e-15 | 433 |
stem cell | 2.95e-14 | 441 |
stromal cell | 1.03e-08 | 28 |
connective tissue cell | 1.57e-08 | 361 |
mesenchymal cell | 1.97e-08 | 354 |
motile cell | 7.28e-08 | 386 |
defensive cell | 2.81e-07 | 48 |
phagocyte | 2.81e-07 | 48 |
monopoietic cell | 6.13e-07 | 59 |
monocyte | 6.13e-07 | 59 |
monoblast | 6.13e-07 | 59 |
promonocyte | 6.13e-07 | 59 |
fat cell | 6.24e-07 | 15 |
muscle precursor cell | 6.37e-07 | 58 |
myoblast | 6.37e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.37e-07 | 58 |
smooth muscle cell | 9.31e-07 | 43 |
smooth muscle myoblast | 9.31e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.63e-13 | 167 |
mesoderm | 1.82e-12 | 315 |
mesoderm-derived structure | 1.82e-12 | 315 |
presumptive mesoderm | 1.82e-12 | 315 |
connective tissue | 7.20e-09 | 371 |
skeletal system | 1.40e-07 | 100 |
skeletal element | 4.88e-07 | 90 |
multilaminar epithelium | 5.81e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.02e-08 | 14 |
reproductive organ cancer | 8.78e-07 | 29 |