FFCP PHASE1:Hg19::chr13:38151913..38151938,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:38151913..38151938,- to FFCP PHASE1:Hg19::chr13:38151913..38151938,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-191bp_to_AK023481_5end | |||
|cluster_id=chr13:38151913..38151938,- | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_1_at_AK023481_5end | |||
|id=chr13:38151913..38151938,- | |||
|ontology_enrichment_celltype=CL:0000055!1.91e-21!180;CL:0000057!1.58e-13!75;CL:0002334!2.01e-12!12;CL:0002494!2.42e-09!16;CL:0000680!5.70e-09!57;CL:0000056!5.70e-09!57;CL:0000355!5.70e-09!57;CL:0000048!8.55e-09!430;CL:0000723!1.16e-08!436;CL:0000187!3.05e-08!54;CL:0002548!4.97e-08!6;CL:0000034!5.33e-08!444;CL:0002570!3.58e-07!8;CL:0000183!5.92e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.39e-18;12!CL:1000306;6.25e-12;4!CL:0002547;6.25e-12;4!CL:0002548;1.49e-11;6!CL:0002494;3.71e-10;16!CL:0002580;9.90e-10;3!CL:0002579;9.90e-10;3!CL:1000487;5.63e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.87e-18,12;CL:0000057,2.47e-15,76;CL:1000306,9.38e-12,4;CL:0002547,9.38e-12,4;CL:0002548,1.26e-11,6;CL:0002494,2.90e-10,16;CL:0002580,7.73e-10,3;CL:0002579,1.35e-09,3;CL:1000487,5.24e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.60e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!9.93e-10!61;UBERON:0002036!9.93e-10!61;UBERON:0003082!9.93e-10!61;UBERON:0002385!3.76e-09!63;UBERON:0001015!3.76e-09!63;UBERON:0000383!3.76e-09!63;UBERON:0000948!1.05e-08!24;UBERON:0005498!1.05e-08!24;UBERON:0004140!1.05e-08!24;UBERON:0009881!1.05e-08!24;UBERON:0004141!1.05e-08!24;UBERON:0003084!1.05e-08!24;UBERON:0007005!1.05e-08!24;UBERON:0004139!1.05e-08!24;UBERON:0004291!1.05e-08!24;UBERON:0004872!2.73e-08!84;UBERON:0007100!2.90e-08!27;UBERON:0000914!1.85e-07!83;UBERON:0002329!1.85e-07!83;UBERON:0003077!1.85e-07!83;UBERON:0003059!1.85e-07!83;UBERON:0007282!1.85e-07!83;UBERON:0009618!1.85e-07!83;UBERON:0007285!1.85e-07!83;UBERON:0004290!2.02e-07!70;UBERON:0001637!3.53e-07!42;UBERON:0003509!3.53e-07!42;UBERON:0004572!3.53e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;6.25e-12;4!UBERON:0000415;6.25e-12;4!UBERON:0007240;6.25e-12;4!UBERON:0005742;6.25e-12;4!UBERON:0005734;6.25e-12;4!UBERON:0004664;6.25e-12;4!UBERON:0004663;6.25e-12;4!UBERON:0003688;4.90e-08;6!UBERON:0002358;4.90e-08;6!UBERON:0003684;4.90e-08;6!UBERON:0001178;4.90e-08;6!UBERON:0000948;5.10e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,9.38e-12,4;UBERON:0007240,9.38e-12,4;UBERON:0005742,9.38e-12,4;UBERON:0005734,9.38e-12,4;UBERON:0004664,9.38e-12,4;UBERON:0004663,9.38e-12,4;UBERON:0000948,6.26e-10,24;UBERON:0005498,6.26e-10,24;UBERON:0004140,6.26e-10,24;UBERON:0009881,6.26e-10,24;UBERON:0004141,6.26e-10,24;UBERON:0003084,6.26e-10,24;UBERON:0007005,6.26e-10,24;UBERON:0004139,6.26e-10,24;UBERON:0004291,6.26e-10,24;UBERON:0007100,1.32e-08,27;UBERON:0003688,6.26e-08,6;UBERON:0002358,6.26e-08,6;UBERON:0003684,6.26e-08,6;UBERON:0001178,6.26e-08,6 | |||
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| ||
|short_description=p1@AK023481 | |||
}} | }} |
Latest revision as of 15:52, 24 July 2015
Short description: | p1@AK023481 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK023481_5end |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | -191bp_to_AK023481_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.87e-18 | 12 |
fibroblast | 2.47e-15 | 76 |
fibroblast of tunica adventitia of artery | 9.38e-12 | 4 |
fibroblast of the aortic adventitia | 9.38e-12 | 4 |
cardiac fibroblast | 1.26e-11 | 6 |
cardiocyte | 2.90e-10 | 16 |
preadipocyte of the breast | 7.73e-10 | 3 |
omentum preadipocyte | 1.35e-09 | 3 |
smooth muscle cell of prostate | 5.24e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
artery wall | 9.38e-12 | 4 |
tunica adventitia of artery | 9.38e-12 | 4 |
adventitia | 9.38e-12 | 4 |
tunica adventitia of blood vessel | 9.38e-12 | 4 |
aorta tunica adventitia | 9.38e-12 | 4 |
aorta wall | 9.38e-12 | 4 |
heart | 6.26e-10 | 24 |
primitive heart tube | 6.26e-10 | 24 |
primary heart field | 6.26e-10 | 24 |
anterior lateral plate mesoderm | 6.26e-10 | 24 |
heart tube | 6.26e-10 | 24 |
heart primordium | 6.26e-10 | 24 |
cardiac mesoderm | 6.26e-10 | 24 |
cardiogenic plate | 6.26e-10 | 24 |
heart rudiment | 6.26e-10 | 24 |
primary circulatory organ | 1.32e-08 | 27 |
omentum | 6.26e-08 | 6 |
peritoneum | 6.26e-08 | 6 |
abdominal cavity | 6.26e-08 | 6 |
visceral peritoneum | 6.26e-08 | 6 |