FFCP PHASE1:Hg19::chr14:23540760..23540800,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:23540760..23540800,- to FFCP PHASE1:Hg19::chr14:23540760..23540800,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22985 | |EntrezGene=22985 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17066 | |HGNC=17066 | ||
|TSSclassifier=strong | |||
|UniProt=G3V3B0,Q9UKV3 | |UniProt=G3V3B0,Q9UKV3 | ||
|association_with_transcript=0bp_to_ENST00000338631,ENST00000397341,ENST00000553501,ENST00000553721,ENST00000557515,NM_001164816,NM_001164817,uc001wiq.3,uc001wir.3_5end | |||
|cluster_id=chr14:23540760..23540800,- | |||
|description=CAGE_peak_2_at_ACIN1_5end | |||
|id=chr14:23540760..23540800,- | |||
|ontology_enrichment_celltype=CL:0000055!2.94e-12!180;CL:0002319!3.82e-12!25;CL:0002321!2.23e-11!248;CL:0000220!5.42e-11!246;CL:0000133!7.80e-10!59;CL:0000221!5.32e-09!71;CL:0000066!1.96e-08!254;CL:0000095!4.04e-08!17;CL:0000123!4.04e-08!17;CL:0000548!7.18e-08!679;CL:0000004!7.18e-08!679;CL:0000255!7.18e-08!679;CL:0000012!2.02e-07!682;CL:0000333!2.50e-07!41;CL:0000243!5.26e-07!15;CL:0000125!5.26e-07!15;CL:0000030!5.26e-07!15;CL:0000339!5.26e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.48e-12;25!CL:0000095;3.63e-08;17!CL:0000243;4.73e-07;15!CL:0000125;4.73e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.82e-12,25;CL:0002321,1.90e-11,250;CL:0000133,7.80e-10,59;CL:0000221,5.24e-09,72;CL:0000066,2.14e-08,253;CL:0000095,4.04e-08,17;CL:0000123,4.04e-08,17;CL:0000333,2.50e-07,41;CL:0000243,5.26e-07,15;CL:0000125,5.26e-07,15;CL:0000030,5.26e-07,15;CL:0000339,5.26e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;4.73e-07;15 | |||
|ontology_enrichment_disease=DOID:14566!2.72e-23!239;DOID:162!1.75e-22!235;DOID:0050687!1.10e-11!143;DOID:0050686!2.01e-10!137;DOID:2531!8.95e-10!51;DOID:0060083!8.95e-10!51;DOID:3095!3.14e-09!22;DOID:2994!3.14e-09!22;DOID:1240!3.08e-08!39;DOID:305!6.44e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.10e-09;22!DOID:2994;3.10e-09;22!DOID:1240;4.70e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.72e-23,239;DOID:162,1.75e-22,235;DOID:0050687,1.10e-11,143;DOID:0050686,2.01e-10,137;DOID:2531,8.95e-10,51;DOID:0060083,8.95e-10,51;DOID:3095,3.14e-09,22;DOID:2994,3.14e-09,22;DOID:1240,3.08e-08,39;DOID:305,6.44e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000924!2.91e-08!173;UBERON:0006601!2.91e-08!173;UBERON:0000073!3.23e-07!94;UBERON:0001016!3.23e-07!94;UBERON:0004121!3.62e-07!169;UBERON:0000475!7.92e-07!365 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.56e-08,171;UBERON:0000924,3.56e-08,171;UBERON:0006601,3.56e-08,171;UBERON:0001016,3.73e-07,89 | |||
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| ||
|short_description=p2@ACIN1 | |||
}} | }} |
Latest revision as of 08:46, 19 September 2015
Short description: | p2@ACIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACIN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000338631, ENST00000397341, ENST00000553501, ENST00000553721, ENST00000557515, NM_001164816, NM_001164817, uc001wiq.3, uc001wir.3_5end |
EntrezGene: | ACIN1 |
HGNC: | 17066 |
UniProt: | G3V3B0Q9UKV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.82e-12 | 25 |
embryonic cell | 1.90e-11 | 250 |
neurectodermal cell | 7.80e-10 | 59 |
ectodermal cell | 5.24e-09 | 72 |
epithelial cell | 2.14e-08 | 253 |
neuron associated cell | 4.04e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 4.04e-08 | 17 |
migratory neural crest cell | 2.50e-07 | 41 |
glial cell (sensu Vertebrata) | 5.26e-07 | 15 |
glial cell | 5.26e-07 | 15 |
glioblast | 5.26e-07 | 15 |
glioblast (sensu Vertebrata) | 5.26e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.56e-08 | 171 |
ectoderm | 3.56e-08 | 171 |
presumptive ectoderm | 3.56e-08 | 171 |
nervous system | 3.73e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.72e-23 | 239 |
cancer | 1.75e-22 | 235 |
cell type cancer | 1.10e-11 | 143 |
organ system cancer | 2.01e-10 | 137 |
hematologic cancer | 8.95e-10 | 51 |
immune system cancer | 8.95e-10 | 51 |
germ cell and embryonal cancer | 3.14e-09 | 22 |
germ cell cancer | 3.14e-09 | 22 |
leukemia | 3.08e-08 | 39 |
carcinoma | 6.44e-07 | 106 |