FFCP PHASE1:Hg19::chr14:76842616..76842623,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2103 | |EntrezGene=2103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3473 | |HGNC=3473 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-76bp_to_ENST00000507951_5end | |||
|cluster_id=chr14:76842616..76842623,+ | |||
|coexpression_cluster_id=C2311 | |||
|description=CAGE_peak_8_at_ESRRB_5end | |||
|id=chr14:76842616..76842623,+ | |||
|ontology_enrichment_celltype=CL:0000242!4.34e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;6.30e-21;2!CL:0000242;6.30e-21;2!CL:0000333;3.35e-09;5!CL:0000312;3.35e-09;5!CL:0000240;7.01e-08;6!CL:0000311;7.01e-08;6!CL:0000079;7.01e-08;6!CL:0000237;7.01e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.70e-21,2;CL:0000312,3.22e-09,5;CL:0000240,6.78e-08,6;CL:0000311,6.78e-08,6;CL:0000079,6.78e-08,6;CL:0000237,6.78e-08,6;CL:0000036,6.78e-08,6;CL:0000357,6.78e-08,6;CL:0000114,6.78e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3!CL:0000357;7.01e-08;6!CL:0000114;7.01e-08;6 | |||
|ontology_enrichment_disease=DOID:171!5.65e-25!10;DOID:3095!1.84e-17!22;DOID:2994!1.84e-17!22;DOID:169!3.06e-11!6;DOID:3193!4.70e-09!2;DOID:962!4.70e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:3193;6.30e-21;2!DOID:962;6.30e-21;2!DOID:171;7.81e-17;10!DOID:1192;1.96e-14;3!DOID:3095;3.21e-08;22!DOID:2994;3.21e-08;22!DOID:169;7.01e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,6.96e-21,2;DOID:962,6.96e-21,2;DOID:171,7.51e-17,10;DOID:1192,2.09e-14,3;DOID:3095,3.15e-08,22;DOID:2994,3.15e-08,22;DOID:169,7.25e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000013!2.68e-13!5;UBERON:0002410!2.68e-13!5;UBERON:0003714!4.70e-09!2;UBERON:0002148!7.49e-09!2;UBERON:0009662!7.49e-09!2;UBERON:0000010!8.60e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;6.30e-21;2!UBERON:0002346;2.80e-11;4!UBERON:0000923;2.80e-11;4!UBERON:0010316;2.80e-11;4!UBERON:0005291;2.80e-11;4!UBERON:0000966;2.74e-09;5!UBERON:0002050;2.74e-09;5!UBERON:0005423;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0000013;3.35e-09;5!UBERON:0002410;3.35e-09;5!UBERON:0000970;5.48e-09;20!UBERON:0002104;1.32e-08;21!UBERON:0000020;6.08e-08;23!UBERON:0001032;1.19e-07;24!UBERON:0004456;1.19e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,6.96e-21,2;UBERON:0000013,3.49e-09,5;UBERON:0002410,3.49e-09,5;UBERON:0000970,1.37e-08,21;UBERON:0002104,1.37e-08,21;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6;UBERON:0000020,1.23e-07,24;UBERON:0001032,1.23e-07,24;UBERON:0004456,1.23e-07,24 | |||
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|short_description=p8@ESRRB | |||
}} | }} |
Latest revision as of 04:41, 16 September 2015
Short description: | p8@ESRRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ESRRB_5end |
Coexpression cluster: | C2311_neuroectodermal_eye_retina_neuroepithelioma_merkel_carcinoid_neuroblastoma |
Association with transcript: | -76bp_to_ENST00000507951_5end |
EntrezGene: | ESRRB |
HGNC: | 3473 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.70e-21 | 2 |
keratinocyte | 3.22e-09 | 5 |
stratified squamous epithelial cell | 6.78e-08 | 6 |
keratin accumulating cell | 6.78e-08 | 6 |
stratified epithelial cell | 6.78e-08 | 6 |
keratinizing barrier epithelial cell | 6.78e-08 | 6 |
epithelial fate stem cell | 6.78e-08 | 6 |
stratified epithelial stem cell | 6.78e-08 | 6 |
surface ectodermal cell | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 6.96e-21 | 2 |
sympathetic nervous system | 3.49e-09 | 5 |
autonomic nervous system | 3.49e-09 | 5 |
eye | 1.37e-08 | 21 |
visual system | 1.37e-08 | 21 |
retina | 6.34e-08 | 6 |
photoreceptor array | 6.34e-08 | 6 |
posterior segment of eyeball | 6.34e-08 | 6 |
sense organ | 1.23e-07 | 24 |
sensory system | 1.23e-07 | 24 |
entire sense organ system | 1.23e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 6.96e-21 | 2 |
neurofibroma | 6.96e-21 | 2 |
neuroectodermal tumor | 7.51e-17 | 10 |
peripheral nervous system neoplasm | 2.09e-14 | 3 |
germ cell and embryonal cancer | 3.15e-08 | 22 |
germ cell cancer | 3.15e-08 | 22 |
neuroendocrine tumor | 7.25e-08 | 6 |