FFCP PHASE1:Hg19::chr15:63674218..63674322,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:63674218..63674322,- to FFCP PHASE1:Hg19::chr15:63674218..63674322,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=771 | |EntrezGene=771 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1371 | |HGNC=1371 | ||
|TSSclassifier=strong | |||
|UniProt=O43570 | |UniProt=O43570 | ||
|association_with_transcript=37bp_to_ENST00000178638_5end | |||
|cluster_id=chr15:63674218..63674322,- | |||
|description=CAGE_peak_2_at_CA12_5end | |||
|id=chr15:63674218..63674322,- | |||
|ontology_enrichment_celltype=CL:0000055!1.66e-21!180;CL:0000057!1.77e-13!75;CL:0000680!9.81e-09!57;CL:0000056!9.81e-09!57;CL:0000355!9.81e-09!57;CL:0002620!3.08e-08!23;CL:0000187!5.68e-08!54;CL:0000183!1.19e-07!59;CL:0000393!2.26e-07!60;CL:0000211!2.26e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.11e-09;23!CL:0000359;4.69e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.40e-13,76;CL:0002620,6.60e-10,23;CL:0000680,5.93e-09,58;CL:0000056,5.93e-09,58;CL:0000355,5.93e-09,58;CL:0000187,4.51e-08,55;CL:0000393,4.10e-07,61;CL:0000211,4.10e-07,61;CL:0000359,6.92e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.69e-21!365;UBERON:0003102!5.11e-14!95;UBERON:0000468!8.41e-12!659;UBERON:0000481!1.64e-11!347;UBERON:0000486!2.71e-11!82;UBERON:0000467!8.77e-11!625;UBERON:0000480!1.36e-10!626;UBERON:0000914!2.06e-10!83;UBERON:0002329!2.06e-10!83;UBERON:0003077!2.06e-10!83;UBERON:0003059!2.06e-10!83;UBERON:0007282!2.06e-10!83;UBERON:0009618!2.06e-10!83;UBERON:0007285!2.06e-10!83;UBERON:0000033!1.10e-09!123;UBERON:0004121!7.98e-09!169;UBERON:0004290!9.00e-09!70;UBERON:0000153!1.62e-08!129;UBERON:0007811!1.62e-08!129;UBERON:0002050!3.91e-08!605;UBERON:0005423!3.91e-08!605;UBERON:0000924!4.79e-08!173;UBERON:0006601!4.79e-08!173;UBERON:0000923!5.76e-08!604;UBERON:0005291!5.76e-08!604;UBERON:0006598!5.76e-08!604;UBERON:0002532!5.76e-08!604;UBERON:0002199!8.07e-08!45;UBERON:0002416!8.07e-08!45;UBERON:0000922!8.16e-08!612;UBERON:0001134!1.06e-07!61;UBERON:0002036!1.06e-07!61;UBERON:0003082!1.06e-07!61;UBERON:0002385!1.27e-07!63;UBERON:0001015!1.27e-07!63;UBERON:0000383!1.27e-07!63;UBERON:0000119!1.36e-07!312;UBERON:0000483!2.48e-07!309;UBERON:0001444!3.17e-07!48;UBERON:0005256!4.18e-07!143;UBERON:0002100!4.36e-07!216;UBERON:0002097!8.82e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;2.78e-07;46!UBERON:0002416;2.78e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.09e-12,99;UBERON:0000486,2.26e-11,83;UBERON:0002199,1.55e-09,46;UBERON:0002416,1.55e-09,46;UBERON:0002329,4.28e-09,71;UBERON:0003059,4.28e-09,71;UBERON:0007282,4.28e-09,71;UBERON:0004290,4.28e-09,71;UBERON:0009618,4.28e-09,71;UBERON:0007524,5.85e-09,73;UBERON:0003077,9.04e-09,72;UBERON:0007285,9.04e-09,72;UBERON:0002097,4.04e-08,41;UBERON:0001134,1.39e-07,62;UBERON:0002036,1.39e-07,62;UBERON:0003082,1.39e-07,62;UBERON:0007503,1.97e-07,78;UBERON:0002385,2.26e-07,64;UBERON:0001015,2.26e-07,64;UBERON:0000383,2.26e-07,64;UBERON:0000165,7.61e-07,29;UBERON:0000930,7.61e-07,29;UBERON:0001444,9.39e-07,49 | |||
|phase1_expression=1.81678379270557,2.78330681058278,1.69145284915165,0,1.34088328328186,0,0,8.84407822797563,3.13422753839806,0,0,0,0.791300934685361,3.09415882400117,2.65117900582333,1.34465029290355,1.20538905604795,0,0,1.35433163884467,1.02000345622126,0,0.85870796139317,0.958120975510189,1.25542639594803,0,0,0,0,0,0,0.919421224478927,4.819294700452,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,3.63239701580021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.511450247374121,1.44575660953827,2.00535164254356,3.0417768981773,3.1811437882044,5.83961844363163,1.13441780596881,1.55210578223795,0.790513071238134,2.94702919869853,5.10013403609559,2.22470665670658,1.29818957461873,1.56716763569341,0.531831842075461,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0.450445921933289,0,0,0,0,0,7.41359888642308,3.97577561356255,2.65924074495618,2.38336525463794,8.03142538096678,6.38403087957043,3.36406560085384,4.2699598291882,0.74000264525148,1.55605517699883,2.15537075311501,2.28846664358842,2.72443369760877,1.72852777344,0,7.80400192075801,3.99330275081114,9.11636951365987,2.11382097558777,3.0755859429945,1.96631129383148,4.08308342509786,0.859840221182376,3.92637968467909,2.37600571456411,4.45080472701402,0,0.718618141816238,0.841680569770331,1.62654075833553,1.6623846929051,4.38977620880838,5.21029252858333,11.8688066536211,0.907457465280168,2.51145489964407,1.49490172172997,8.47727604638247,6.90209520994125,3.09157587715317,2.31876486041066,2.97786970130544,5.23206629947925,4.09235421677034,1.51460264546469,1.74894807420369,3.39456719319505,8.52023022039874,1.81353776809752,3.73033303083073,1.93260853163297,1.36373060295417,3.15485054927904,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,1.28648187638577,0,0.928735856063958,5.0531563716871,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0.982827216677626,0,0,0,2.74508496477641,3.18275827685014,2.24803506515239,1.91005047582099,2.03694579348765,0,2.07986957055916,1.44331342025273,0.579652024875384,1.76113041353732,0.144366447761074,0,0.190254152234598,1.58040879591855,0.858486162094873,0,0.702012795417713,0.743155811443641,0,0.16798212819886,1.13420077793909,4.29880908973672,2.3250715081117,4.98397482914775,0,0,0.621984346622316,0,0.25248486685276,0.063497894292169,1.52795370223311,0,1.71072446022705,0,0,0,1.00917975910825,1.30788020649984,1.54010400223995,1.29271715757778,3.57656445851882,2.535908257668,2.39344304926383,3.12022310734098,6.94459910507784,1.41849132023278,7.72624319146688,0.285955987316295,0,0,2.28015329005615,0,2.37585561880029,1.20575750823834,1.74306691720059,0.899756920638513,0,0,0,3.35474797688216,0,8.5582143024431,3.04040744001916,4.9314317412092,1.43248770591916,0,0,0,0,17.024339822905,5.20559415430487,0.773288812777695,2.34522771468088,1.27587750330633,0,0,0,2.4538298343828,2.00068208423871,0.542530047399471,0.415941723061614,0.356857977594324,0,0.937131319941706,12.6397361885642,9.09630016223939,4.1389228517002,7.97070718242524,10.5090426068771,2.78027566297865,1.76221041716467,0.343143423810856,0,0,0,0,0,0.30239029332968,0.496215615637554,0.920771839728375,0.280660094433074,1.79394808957981,2.55853624533352,0.965123526861645,0,3.70103265126373,7.45759246315134,5.99528238900807,3.63478100428535,5.92672930145792,0,3.80962293576241,3.40699659062816,0.574072240823034,1.63882051206045,1.31124414959424,0,0.693138033939733,0,1.46139224653261,0.633309773357254,0,0,0.647747748306418,0,1.35473218771926,0.501689773854853,0.764628819135115,0,0.223874754722178,0,0,1.53870075069834,1.31205858279882,0.976135183992909,0.721287081534056,0,0,5.74265537996172,4.55042172225565,3.21367859688319,1.93341436584244,3.23502095940753,3.53058451870098,1.51620229732984,1.6113036730241,3.48040065394148,2.81247870473133,0.0890320356467374,4.79326254546837,12.1079742440017,5.48734663726712,8.80072693443284,3.253918845081,11.333244485903,1.3940745403212,2.7723022215848,4.25844824253617,0,2.59453906745488,2.28999818787186,2.60510858551767,3.16379424718726,1.14378116354295,1.79128453917934,2.56763392820352,11.1371136774078,2.35484592059769,0.539617372749944,0,0.117812402345686,3.23491970517306,0,1.26377536871694,0,3.1682753652067,1.05650146756755,0.682499557039929,0.848432591722276,9.04064932961942,4.96228809191512,0.66343897524122,4.38450885253763,5.78775534266688,4.59126326432643,2.43492452355245,3.0982349809975,5.91560765317707,1.43411352204052,0.88424136911809,3.5667105148125,4.96665489698837,8.65541304720423,3.95153871551882,1.13841952129715,0,2.4055528181378,3.35151137767894,3.26672954583968,0.753150406214233,4.73555909938353,5.05414427002877,11.0857538384169,4.36474460393223,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5614216212246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| ||
|short_description=p2@CA12 | |||
}} | }} |
Latest revision as of 12:25, 18 September 2015
Short description: | p2@CA12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CA12_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_ENST00000178638_5end |
EntrezGene: | CA12 |
HGNC: | 1371 |
UniProt: | O43570 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.40e-13 | 76 |
skin fibroblast | 6.60e-10 | 23 |
muscle precursor cell | 5.93e-09 | 58 |
myoblast | 5.93e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.93e-09 | 58 |
muscle cell | 4.51e-08 | 55 |
electrically responsive cell | 4.10e-07 | 61 |
electrically active cell | 4.10e-07 | 61 |
vascular associated smooth muscle cell | 6.92e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.09e-12 | 99 |
multilaminar epithelium | 2.26e-11 | 83 |
integument | 1.55e-09 | 46 |
integumental system | 1.55e-09 | 46 |
somite | 4.28e-09 | 71 |
presomitic mesoderm | 4.28e-09 | 71 |
presumptive segmental plate | 4.28e-09 | 71 |
dermomyotome | 4.28e-09 | 71 |
trunk paraxial mesoderm | 4.28e-09 | 71 |
dense mesenchyme tissue | 5.85e-09 | 73 |
paraxial mesoderm | 9.04e-09 | 72 |
presumptive paraxial mesoderm | 9.04e-09 | 72 |
skin of body | 4.04e-08 | 41 |
skeletal muscle tissue | 1.39e-07 | 62 |
striated muscle tissue | 1.39e-07 | 62 |
myotome | 1.39e-07 | 62 |
epithelial vesicle | 1.97e-07 | 78 |
muscle tissue | 2.26e-07 | 64 |
musculature | 2.26e-07 | 64 |
musculature of body | 2.26e-07 | 64 |
mouth | 7.61e-07 | 29 |
stomodeum | 7.61e-07 | 29 |
subdivision of head | 9.39e-07 | 49 |