FFCP PHASE1:Hg19::chr15:66858278..66858296,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:66858278..66858296,- to FFCP PHASE1:Hg19::chr15:66858278..66858296,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=197021 | |EntrezGene=197021 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15583 | |HGNC=15583 | ||
|TSSclassifier=strong | |||
|UniProt=B3KQY0 | |UniProt=B3KQY0 | ||
|association_with_transcript=5bp_to_ENST00000537670_5end | |||
|cluster_id=chr15:66858278..66858296,- | |||
|coexpression_cluster_id=C3504 | |||
|description=CAGE_peak_2_at_LCTL_5end | |||
|id=chr15:66858278..66858296,- | |||
|ontology_enrichment_celltype=CL:0000055!2.64e-21!180;CL:0002319!1.45e-14!25;CL:0000243!5.31e-13!15;CL:0000125!5.31e-13!15;CL:0000030!5.31e-13!15;CL:0000339!5.31e-13!15;CL:0000128!1.46e-12!7;CL:0000126!1.46e-12!7;CL:0000127!1.46e-12!7;CL:0002453!1.46e-12!7;CL:0000133!2.35e-11!59;CL:0000095!3.03e-11!17;CL:0000123!3.03e-11!17;CL:0000221!4.22e-09!71;CL:0002322!1.18e-08!5;CL:0000333!1.89e-08!41;CL:0000057!1.20e-07!75;CL:0000306!2.56e-07!4;CL:0002222!2.56e-07!4;CL:0002224!2.56e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000128;1.06e-38;7!CL:0000126;1.06e-38;7!CL:0000127;1.06e-38;7!CL:0002605;1.88e-23;3!CL:0000306;1.99e-17;4!CL:0002222;1.99e-17;4!CL:0002224;1.99e-17;4!CL:0002319;8.54e-17;25!CL:0000243;1.10e-15;15!CL:0000125;1.10e-15;15!CL:0000047;1.14e-15;2!CL:0000095;5.55e-14;17!CL:0002603;4.88e-11;3!CL:0002539;3.76e-07;10!CL:0002322;8.65e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,6.59e-39,7;CL:0000126,6.59e-39,7;CL:0000127,6.59e-39,7;CL:0002453,6.59e-39,7;CL:0002605,1.15e-23,3;CL:0000306,2.87e-17,4;CL:0002222,2.87e-17,4;CL:0002224,2.87e-17,4;CL:0002319,8.67e-17,25;CL:0000243,9.11e-16,15;CL:0000125,9.11e-16,15;CL:0000030,9.11e-16,15;CL:0000339,9.11e-16,15;CL:0000095,4.69e-14,17;CL:0000123,4.69e-14,17;CL:0000133,7.88e-13,59;CL:0000333,9.92e-13,41;CL:0002603,4.66e-11,3;CL:0000221,3.03e-10,72;CL:0002539,3.20e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000339;1.10e-15;15!CL:0000133;4.69e-09;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!4.72e-11!86;UBERON:0001017!4.76e-11!82;UBERON:0000073!1.67e-10!94;UBERON:0001016!1.67e-10!94;UBERON:0004121!2.69e-10!169;UBERON:0000033!5.08e-10!123;UBERON:0000924!9.48e-10!173;UBERON:0006601!9.48e-10!173;UBERON:0000153!4.71e-09!129;UBERON:0007811!4.71e-09!129;UBERON:0007625!2.37e-08!11;UBERON:0003075!4.45e-08!86;UBERON:0007284!4.45e-08!86;UBERON:0000475!4.86e-08!365;UBERON:0000955!6.43e-08!69;UBERON:0006238!6.43e-08!69;UBERON:0003076!8.09e-08!15;UBERON:0003057!8.09e-08!15;UBERON:0001049!2.12e-07!57;UBERON:0005068!2.12e-07!57;UBERON:0006241!2.12e-07!57;UBERON:0007135!2.12e-07!57;UBERON:0002346!2.23e-07!90;UBERON:0010077!2.56e-07!4;UBERON:0005389!2.56e-07!4;UBERON:0000484!2.56e-07!4;UBERON:0002546!2.56e-07!4;UBERON:0000965!2.56e-07!4;UBERON:0001803!2.56e-07!4;UBERON:0003073!2.56e-07!4;UBERON:0005426!2.56e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.99e-17;4!UBERON:0005389;1.99e-17;4!UBERON:0000484;1.99e-17;4!UBERON:0000965;1.99e-17;4!UBERON:0001803;1.99e-17;4!UBERON:0004237;3.76e-07;10!UBERON:0004695;3.76e-07;10!UBERON:0002111;3.76e-07;10!UBERON:0004178;3.76e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,2.87e-17,4;UBERON:0005389,2.87e-17,4;UBERON:0000484,2.87e-17,4;UBERON:0002546,2.87e-17,4;UBERON:0000965,2.87e-17,4;UBERON:0001803,2.87e-17,4;UBERON:0003073,2.87e-17,4;UBERON:0005426,2.87e-17,4;UBERON:0000076,6.70e-09,8;UBERON:0004237,3.20e-07,10;UBERON:0004695,3.20e-07,10;UBERON:0002111,3.20e-07,10;UBERON:0004178,3.20e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,1.34465029290355,1.80808358407193,1.46062018077475,0.487932798790507,2.09305798730539,0.612002073732759,1.56727360739044,2.28988789704845,2.73748850145768,1.63205431473244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.289693037921647,1.5905718941022,1.94653948121054,0.945348171640679,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45650098894541,0,0,0,0,0,0.622422070799533,0.134710672069688,0.326923806226917,0.605429710579726,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,2.37600571456411,0.494533858557114,0,0,0,0.125118519871964,0,1.75591048352335,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.487185025805993,0,0.0920498986422993,0,2.13005755509969,0.503760491138201,0.169560592310488,0,0,0,0.731842236777572,0.530119073285941,0.580969714347592,1.24393266018445,1.26160425437814,0.36497735907583,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,1.44331342025273,2.78232971940184,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,0,0,0,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,1.27047312111232,1.30139853857622,0.773288812777695,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0,0.511707249066704,0,0,0.308419387605311,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.769350375349168,0,0,0,0.183138929636687,0.247528499761764,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,1.26377536871694,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.23838963263144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0.137041924646751,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0.343189995723929,0,0,0,0.135904206073614,0.313808538937,0,0.577901179803038,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0.136203406111576,0.321506296930038,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0.340776043570843,0.679872549120754,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.248385611765534,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0,0,0.295710299979268,0,0.449803112163605,0.155262956876259,0,0,0,0.150257608997218,0,0.406870733204662,0.363697318405119,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,1.79024599904647,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0,0,0,1.11598505450025,0,0,0.883164973845552,0.437062287854782,0,0.305966489225945,0.26721740526556,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,1.34465029290355,1.80808358407193,1.46062018077475,0.487932798790507,2.09305798730539,0.612002073732759,1.56727360739044,2.28988789704845,2.73748850145768,1.63205431473244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.289693037921647,1.5905718941022,1.94653948121054,0.945348171640679,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45650098894541,0,0,0,0,0,0.622422070799533,0.134710672069688,0.326923806226917,0.605429710579726,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,2.37600571456411,0.494533858557114,0,0,0,0.125118519871964,0,1.75591048352335,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.487185025805993,0,0.0920498986422993,0,2.13005755509969,0.503760491138201,0.169560592310488,0,0,0,0.731842236777572,0.530119073285941,0.580969714347592,1.24393266018445,1.26160425437814,0.36497735907583,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,1.44331342025273,2.78232971940184,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,0,0,0,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,1.27047312111232,1.30139853857622,0.773288812777695,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0,0.511707249066704,0,0,0.308419387605311,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.769350375349168,0,0,0,0.183138929636687,0.247528499761764,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,1.26377536871694,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.23838963263144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0.137041924646751,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0.343189995723929,0,0,0,0.135904206073614,0.313808538937,0,0.577901179803038,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0.136203406111576,0.321506296930038,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0.340776043570843,0.679872549120754,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.248385611765534,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0,0,0.295710299979268,0,0.449803112163605,0.155262956876259,0,0,0,0.150257608997218,0,0.406870733204662,0.363697318405119,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,1.79024599904647,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0,0,0,1.11598505450025,0,0,0.883164973845552,0.437062287854782,0,0.305966489225945,0.26721740526556,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@LCTL | |||
}} | }} |
Latest revision as of 16:33, 18 September 2015
Short description: | p2@LCTL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LCTL_5end |
Coexpression cluster: | C3504_astrocytoma_Chondrocyte_Astrocyte_Lens_Aortic_Fibroblast_Neural |
Association with transcript: | 5bp_to_ENST00000537670_5end |
EntrezGene: | LCTL |
HGNC: | 15583 |
UniProt: | B3KQY0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 6.59e-39 | 7 |
macroglial cell | 6.59e-39 | 7 |
astrocyte | 6.59e-39 | 7 |
oligodendrocyte precursor cell | 6.59e-39 | 7 |
astrocyte of the cerebral cortex | 1.15e-23 | 3 |
crystallin accumulating cell | 2.87e-17 | 4 |
vertebrate lens cell | 2.87e-17 | 4 |
lens epithelial cell | 2.87e-17 | 4 |
neural cell | 8.67e-17 | 25 |
glial cell (sensu Vertebrata) | 9.11e-16 | 15 |
glial cell | 9.11e-16 | 15 |
glioblast | 9.11e-16 | 15 |
glioblast (sensu Vertebrata) | 9.11e-16 | 15 |
neuron associated cell | 4.69e-14 | 17 |
neuron associated cell (sensu Vertebrata) | 4.69e-14 | 17 |
neurectodermal cell | 7.88e-13 | 59 |
migratory neural crest cell | 9.92e-13 | 41 |
astrocyte of the cerebellum | 4.66e-11 | 3 |
ectodermal cell | 3.03e-10 | 72 |
aortic smooth muscle cell | 3.20e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 2.87e-17 | 4 |
transparent eye structure | 2.87e-17 | 4 |
simple cuboidal epithelium | 2.87e-17 | 4 |
cranial placode | 2.87e-17 | 4 |
lens of camera-type eye | 2.87e-17 | 4 |
epithelium of lens | 2.87e-17 | 4 |
lens placode | 2.87e-17 | 4 |
lens vesicle | 2.87e-17 | 4 |
external ectoderm | 6.70e-09 | 8 |
blood vessel smooth muscle | 3.20e-07 | 10 |
arterial system smooth muscle | 3.20e-07 | 10 |
artery smooth muscle tissue | 3.20e-07 | 10 |
aorta smooth muscle tissue | 3.20e-07 | 10 |