FFCP PHASE1:Hg19::chr18:46477458..46477479,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:46477458..46477479,- to FFCP PHASE1:Hg19::chr18:46477458..46477479,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4092 | |EntrezGene=4092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6773 | |HGNC=6773 | ||
|TSSclassifier=strong | |||
|UniProt=O15105 | |UniProt=O15105 | ||
|association_with_transcript=-377bp_to_ENST00000262158,NM_001190821,NM_005904,uc002ldg.2_5end | |||
|cluster_id=chr18:46477458..46477479,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_4_at_SMAD7_5end | |||
|id=chr18:46477458..46477479,- | |||
|ontology_enrichment_celltype=CL:0002087!8.33e-20!119;CL:0000738!3.08e-18!140;CL:0002031!4.68e-16!124;CL:0000542!5.01e-13!53;CL:0000051!5.01e-13!53;CL:0000838!2.61e-12!52;CL:0000134!5.25e-12!358;CL:0000037!6.60e-12!172;CL:0000566!6.60e-12!172;CL:0002320!1.01e-11!365;CL:0002032!3.79e-11!165;CL:0000837!3.79e-11!165;CL:0000988!7.55e-11!182;CL:0000219!2.86e-09!390;CL:0000048!7.43e-09!430;CL:0000723!2.50e-08!436;CL:0000034!4.14e-08!444;CL:0000791!6.63e-08!18;CL:0000789!6.63e-08!18;CL:0002420!6.63e-08!18;CL:0002419!6.63e-08!18;CL:0000790!6.63e-08!18;CL:0000084!7.37e-08!25;CL:0000827!7.37e-08!25;CL:0000860!2.35e-07!45;CL:0002057!6.39e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000623;5.07e-30;3!CL:0000767;6.90e-29;3!CL:0002393;1.57e-14;6!CL:0002397;1.57e-14;6!CL:0000226;2.34e-13;3!CL:0000842;2.34e-13;3!CL:0000791;2.35e-13;18!CL:0000789;2.35e-13;18!CL:0002419;2.35e-13;18!CL:0000542;3.26e-12;53!CL:0000094;3.17e-11;8!CL:0000084;1.41e-09;25!CL:0002087;6.45e-09;104!CL:0000625;1.40e-08;11!CL:0000081;2.64e-08;11!CL:0000624;2.78e-07;6!CL:0000236;3.14e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.60e-30,3;CL:0000825,4.60e-30,3;CL:0000767,5.18e-29,3;CL:0000738,5.56e-25,136;CL:0002087,4.10e-21,115;CL:0000838,7.55e-21,52;CL:0000542,2.01e-20,53;CL:0000051,2.01e-20,53;CL:0000037,1.01e-19,168;CL:0000988,1.40e-18,177;CL:0002032,2.18e-16,161;CL:0000837,2.18e-16,161;CL:0002031,2.13e-15,120;CL:0000791,2.41e-13,18;CL:0000789,2.41e-13,18;CL:0002420,2.41e-13,18;CL:0002419,2.41e-13,18;CL:0000790,2.41e-13,18;CL:0000226,2.49e-13,3;CL:0000842,2.49e-13,3;CL:0000094,2.86e-11,8;CL:0002393,6.67e-10,9;CL:0002397,6.67e-10,9;CL:0000084,1.43e-09,25;CL:0000827,1.43e-09,25;CL:0000625,1.47e-08,11;CL:0000081,2.45e-08,11;CL:0000134,8.02e-08,354;CL:0002320,1.31e-07,361;CL:0000624,2.69e-07,6;CL:0000219,7.32e-07,386;CL:0000236,9.41e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;2.35e-13;18!CL:0000051;3.26e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.80e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.55e-07,371 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0.152826811495903,0.246301768349837,0.314843125254717,1.18009283054671,6.1412703695554,1.85779347979291,0,0,0,0,0,0,1.10799081706375,1.80490002723128,1.30206522429511,0,0.32389366601898,0,0,0.377875943688809,0.727752183563449,0,0,0.309706370895104,0,1.0246428261164,0,0,0.645484683583826,0,0.376484679085209,0,0.449446968890169,0,0,0,0.329851300186716,0.598390972864896,0.852449501065388,0,0.56738522469114,0.622822248995575,0,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0,0,0,0,3.41527781465669,6.45960908308033,3.44045905312706,0,1.12101712596307,0,0.590129310341499,3.93010762749165,2.2616164889946,0,0,0,0,0,0.589211814949674,0.443067789167242,0,0,0,0,0,0,0.14828656316206,0,0,0,0.766440987203842,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,6.04820229674197,13.6394499849589,5.35850294366356,0,0,0,0.361439152384566,0.50133791063589,0,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0.709336764396714,0,0,0.24666754841716,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0.337552664482532,0.0974370051611986,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0.112085143993527,6.30498432646167,11.2126338926949,6.16046574142792,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0.206768026122887,1.07857100409308,1.49418580924822,0,0,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0.616067160352178,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0.63337622438398,0.19924798825107,0,0,0,0.492339221844278,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0.858452096273142,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0.321506296930038,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0,0,0,0,0,0.414239055347196,0,0.395223263795889,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0.59996218756479,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0.352675943690684,0,0,0,0,0.41023272848151,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.230467975111559,0.342976018874837,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0.158013611732727,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.339854229375634,0,0,0.0999411559249289,0,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0,0.432626562123789,0,0.109265571963696,0,0.101988829741982,0,0.18378979906969,0,0.0757786982182394,0,0,0,0,0,0.193766729508018,0,0.224263725161227,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0.152826811495903,0.246301768349837,0.314843125254717,1.18009283054671,6.1412703695554,1.85779347979291,0,0,0,0,0,0,1.10799081706375,1.80490002723128,1.30206522429511,0,0.32389366601898,0,0,0.377875943688809,0.727752183563449,0,0,0.309706370895104,0,1.0246428261164,0,0,0.645484683583826,0,0.376484679085209,0,0.449446968890169,0,0,0,0.329851300186716,0.598390972864896,0.852449501065388,0,0.56738522469114,0.622822248995575,0,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0,0,0,0,3.41527781465669,6.45960908308033,3.44045905312706,0,1.12101712596307,0,0.590129310341499,3.93010762749165,2.2616164889946,0,0,0,0,0,0.589211814949674,0.443067789167242,0,0,0,0,0,0,0.14828656316206,0,0,0,0.766440987203842,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,6.04820229674197,13.6394499849589,5.35850294366356,0,0,0,0.361439152384566,0.50133791063589,0,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0.709336764396714,0,0,0.24666754841716,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0.337552664482532,0.0974370051611986,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0.112085143993527,6.30498432646167,11.2126338926949,6.16046574142792,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0.206768026122887,1.07857100409308,1.49418580924822,0,0,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0.616067160352178,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0.63337622438398,0.19924798825107,0,0,0,0.492339221844278,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0.858452096273142,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0.321506296930038,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0,0,0,0,0,0.414239055347196,0,0.395223263795889,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0.59996218756479,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0.352675943690684,0,0,0,0,0.41023272848151,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.230467975111559,0.342976018874837,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0.158013611732727,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.339854229375634,0,0,0.0999411559249289,0,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0,0.432626562123789,0,0.109265571963696,0,0.101988829741982,0,0.18378979906969,0,0.0757786982182394,0,0,0,0,0,0.193766729508018,0,0.224263725161227,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@SMAD7 | |||
}} | }} |
Latest revision as of 17:02, 19 September 2015
Short description: | p4@SMAD7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SMAD7_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -377bp_to_ENST00000262158, NM_001190821, NM_005904, uc002ldg.2_5end |
EntrezGene: | SMAD7 |
HGNC: | 6773 |
UniProt: | O15105 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.55e-07 | 371 |