FFCP PHASE1:Hg19::chr19:42806807..42806830,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:42806807..42806830,- to FFCP PHASE1:Hg19::chr19:42806807..42806830,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5050 | |EntrezGene=5050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8576 | |HGNC=8576 | ||
|TSSclassifier=strong | |||
|UniProt=Q15102 | |UniProt=Q15102 | ||
|association_with_transcript=-11bp_to_ENST00000262890,NM_002573,uc002otg.2_5end | |||
|cluster_id=chr19:42806807..42806830,- | |||
|description=CAGE_peak_7_at_PAFAH1B3_5end | |||
|id=chr19:42806807..42806830,- | |||
|ontology_enrichment_celltype=CL:0000066!1.12e-13!254;CL:0000542!1.60e-13!53;CL:0000051!1.60e-13!53;CL:0000838!3.73e-13!52;CL:0000084!1.34e-08!25;CL:0000827!1.34e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.09e-08;53!CL:0000084;1.39e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.33e-15,53;CL:0000051,5.33e-15,53;CL:0000838,1.36e-14,52;CL:0000066,8.44e-13,253;CL:0000084,2.62e-09,25;CL:0000827,2.62e-09,25;CL:0000945,6.43e-07,24;CL:0000826,6.43e-07,24;CL:0000791,9.17e-07,18;CL:0000789,9.17e-07,18;CL:0002420,9.17e-07,18;CL:0002419,9.17e-07,18;CL:0000790,9.17e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;1.09e-08;53 | |||
|ontology_enrichment_disease=DOID:162!1.93e-11!235;DOID:14566!1.09e-10!239;DOID:0050686!6.51e-08!137;DOID:0050687!9.57e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.61e-10,235;DOID:14566,6.63e-09,239;DOID:0050687,3.48e-07,143;DOID:0050686,3.49e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,2.21160542851358,10.4670175195864,1.52908960491121,3.16520373874144,0.866364470720326,1.65698687863958,0,0,1.46062018077475,0,5.41732655537867,3.67201244239655,3.44800193625897,2.28988789704845,2.32686522623903,2.51085279189606,2.52164238968239,2.62721886239826,3.06972047123349,0,0.383829398097213,0.77408061658038,4.59710612239464,2.409647350226,2.21852406100073,1.08454080812422,2.13253848731132,1.17440175733939,1.10799081706375,0,0.434021741431704,0.671746422719773,0.971680998056939,0.515151135268373,0.581592955118259,0,0,0.232429036905685,0.411167888021826,0.619412741790207,0.863077176966451,0.256160706529101,0,0,0,0,0.564727018627814,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0.605399502633369,0,0.316462387440884,0.211255286311942,0.425208599930087,0.419317291016752,0.561643155732475,0.300353785683013,0,0.570025487482497,0.39783335439818,1.0959849225878,3.51992488922645,3.82297027883492,4.44754626931777,3.41384178053206,2.00197993518006,3.4485146397269,1.98313461835459,6.67837628174755,1.1384259382189,0,1.14681968437569,2.64342657158052,1.12101712596307,3.423993102076,1.7703879310245,2.35806457649499,2.46721798799411,3.8452893939856,5.86660079940463,3.78758244587787,5.84480185223734,2.78526142212934,3.82987679717288,4.65221178625604,4.06205795647523,4.09892223122161,3.12142434143708,4.60426132890293,4.42160028457357,3.47763702882063,1.4828656316206,2.94294910898684,2.09071047609954,2.94604291013672,4.59864592322305,5.15441168223945,1.01207876807801,2.86708872891687,1.30216690771284,5.70271226669025,2.40920190524436,2.43174561193395,2.49861453104692,2.60454977248419,4.10563998460523,1.41124720257313,1.87208137048455,1.73789284659359,0,0,1.15076305659177,0.361439152384566,1.00267582127178,0.869079113764942,0,0,2.83604451492204,1.55210578223795,2.54720878510066,1.37528029272598,1.82147644146271,3.33705998505986,0.324547393654683,0.348259474598534,0.132957960518865,0.953962497221368,1.71598473234038,1.48583000531826,1.59009925893364,0,0.694281003215189,1.13061588384802,1.67799774483962,1.92582629358047,0.835979866147242,1.29208379584664,1.42306505074684,0.66944122552934,2.01414658554573,0.760272105718513,1.70843440283719,1.10298924103761,3.24056779152704,1.51809538082936,0.898117490504679,1.57656072676651,4.5994991239765,2.84779697870439,2.38162267109529,0,0,3.05265836499774,0,0.886413581652058,0.132409180813219,1.14734648299525,0,2.24271040056923,0,5.18001851676036,0,0.404132016209064,0.980771418680752,2.11900398702904,1.72852777344,0.70296429550139,0.312160076830321,1.1409436430889,0,1.05691048779388,1.78060238804945,1.54495887372473,0.61246251376468,2.08818339430006,0.309977343527296,1.18800285728205,0.247266929278557,0,0,1.17835279767846,1.00094815897571,0.277064115484183,0.438977620880838,1.22595118319608,0,1.02088964844019,0.358779271377724,0,0.635795703478686,0.300091096084402,0.515262646192195,0,0.18611685633159,0.337552664482532,0.779496041289589,0.504867548488229,0.0920498986422993,0.323292113637624,0,0.503760491138201,1.52604533079439,2.31913023795956,2.18196896472668,1.14721838155602,4.51302712679503,3.31324420803713,3.48581828608555,3.73179798055334,3.02785021050754,3.28479623168247,1.56449532329816,3.21620469096443,0,0,0.721879481669586,2.9576700009961,1.51726221070292,3.61516544825223,2.53676137284506,3.05031221729369,2.37270619111097,2.69662616320329,3.13954344200554,4.23221872641029,1.4763109092493,2.80483547606892,2.057870056657,2.94017422771084,0,0,0,3.09024169590255,2.33678033231916,1.54411029268673,1.97550513735526,3.37205259772859,1.50793458617446,1.66659201285353,0.325808305310325,0,1.44331342025273,3.36198174427723,1.40890433082986,0.866198686566443,1.38895653772983,2.09279567458058,3.1608175918371,3.43394464837949,0.984868024349589,0.234004265139238,0.445893486866185,1.87467667973554,1.34385702559088,0.708875486211932,1.07470227243418,2.3250715081117,5.75074018747817,0.985326475791887,2.0251139823042,0.414656231081544,1.44119953416961,1.8936365013957,1.52394946301206,1.14596527667483,2.34434894420094,1.71072446022705,2.05654985406647,4.20480280981484,2.00078502841405,1.34557301214433,2.1798003441664,1.0267360014933,1.68053230485111,0,0,0.26593811658487,3.12022310734098,1.54324424557285,1.41849132023278,1.8649552531127,0.142977993658148,0,0.823240336780769,0,0,0.791951872933429,2.1100756394171,1.74306691720059,0.899756920638513,1.2162378064119,1.50677127429638,0,1.91699884393266,5.7430967917057,0,0.434343920002738,0.821905290201534,0.537182889719687,3.25046917581229,1.57624608161542,1.2937654491571,1.41177339907723,1.27047312111232,1.30139853857622,3.09315525111078,6.03058555203656,2.55175500661265,0.749007023947182,0,0,1.2269149171914,4.00136416847742,1.35632511849868,0.207970861530807,0.356857977594324,0.473107245101804,0.234282829985426,0,0,2.0694614258501,0.664225598535437,1.65932251687533,0.60818530127658,6.46143819627044,3.43143423810856,0.82707210449155,0.431428401637234,1.1740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| ||
|short_description=p7@PAFAH1B3 | |||
}} | }} |
Latest revision as of 08:56, 18 September 2015
Short description: | p7@PAFAH1B3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PAFAH1B3_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000262890, NM_002573, uc002otg.2_5end |
EntrezGene: | PAFAH1B3 |
HGNC: | 8576 |
UniProt: | Q15102 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.33e-15 | 53 |
common lymphoid progenitor | 5.33e-15 | 53 |
lymphoid lineage restricted progenitor cell | 1.36e-14 | 52 |
epithelial cell | 8.44e-13 | 253 |
T cell | 2.62e-09 | 25 |
pro-T cell | 2.62e-09 | 25 |
lymphocyte of B lineage | 6.43e-07 | 24 |
pro-B cell | 6.43e-07 | 24 |
mature alpha-beta T cell | 9.17e-07 | 18 |
alpha-beta T cell | 9.17e-07 | 18 |
immature T cell | 9.17e-07 | 18 |
mature T cell | 9.17e-07 | 18 |
immature alpha-beta T cell | 9.17e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.61e-10 | 235 |
disease of cellular proliferation | 6.63e-09 | 239 |
cell type cancer | 3.48e-07 | 143 |
organ system cancer | 3.49e-07 | 137 |