FFCP PHASE1:Hg19::chr19:4284765..4284786,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:4284765..4284786,+ to FFCP PHASE1:Hg19::chr19:4284765..4284786,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:4284765..4284786,+ | |||
|coexpression_cluster_id=C3800 | |||
|description=CAGE_peak_at_chr19:4284765..4284786,+ | |||
|id=chr19:4284765..4284786,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.87e-19!7;CL:0000586!2.87e-19!7;CL:0002322!1.12e-13!5;CL:0000223!6.58e-09!59;CL:0000181!7.87e-08!12;CL:0000417!7.87e-08!12;CL:0000668!7.87e-08!12;CL:0000414!7.87e-08!12;CL:0000412!7.87e-08!12;CL:0000182!7.87e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.02e-21;7!CL:0000586;6.02e-21;7!CL:0000182;1.82e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.90e-21,7;CL:0000586,4.90e-21,7;CL:0000182,1.86e-07,12;CL:0000223,6.56e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.00e-10;1!UBERON:0009117;8.72e-09;10!UBERON:0005564;8.72e-09;10 | |||
|ontology_enrichment_disease=DOID:305!5.20e-14!106;DOID:0050687!6.82e-14!143;DOID:3095!3.15e-10!22;DOID:2994!3.15e-10!22;DOID:162!4.18e-09!235;DOID:14566!1.04e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:1799;3.00e-10;1!DOID:10165;3.00e-10;1!DOID:1798;3.00e-10;1!DOID:3095;8.55e-07;22!DOID:2994;8.55e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.01e-10,1;DOID:10165,3.01e-10,1;DOID:1798,3.01e-10,1;DOID:3095,8.04e-07,22;DOID:2994,8.04e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000160!7.70e-14!27;UBERON:0005409!7.76e-12!35;UBERON:0000059!7.09e-09!11;UBERON:0001155!6.08e-08!9;UBERON:0004921!2.36e-07!129;UBERON:0004185!2.36e-07!129;UBERON:0009856!4.11e-07!26;UBERON:0004119!4.71e-07!169;UBERON:0000925!4.71e-07!169;UBERON:0006595!4.71e-07!169;UBERON:0001007!5.20e-07!155;UBERON:0001555!5.20e-07!155;UBERON:0007026!5.20e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.03e-24;22!UBERON:0000160;4.56e-24;17!UBERON:0001155;1.19e-16;9!UBERON:0004921;5.77e-14;33!UBERON:0000059;1.15e-13;11!UBERON:0000473;7.43e-11;8!UBERON:0001007;2.45e-10;81!UBERON:0001154;3.00e-10;1!UBERON:0001153;3.00e-10;1!UBERON:0009854;3.00e-10;1!UBERON:0002108;3.65e-08;4!UBERON:0003135;4.96e-08;11!UBERON:0002107;5.45e-08;19!UBERON:0006925;5.45e-08;19!UBERON:0001555;5.39e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.26e-24,17;UBERON:0005409,2.43e-21,25;UBERON:0001155,9.72e-17,9;UBERON:0000059,9.76e-14,11;UBERON:0000473,6.95e-11,8;UBERON:0001154,1.89e-10,1;UBERON:0001153,1.89e-10,1;UBERON:0001045,1.89e-10,1;UBERON:0009854,7.02e-10,23;UBERON:0004921,4.44e-09,118;UBERON:0009856,1.01e-08,26;UBERON:0001007,2.17e-08,145;UBERON:0001555,2.17e-08,145;UBERON:0007026,2.17e-08,145;UBERON:0002108,4.22e-08,4;UBERON:0003135,4.73e-08,11;UBERON:0002107,5.66e-08,19;UBERON:0006925,5.66e-08,19;UBERON:0008836,5.66e-08,19;UBERON:0004119,2.09e-07,160;UBERON:0000925,2.09e-07,160;UBERON:0006595,2.09e-07,160;UBERON:0008835,6.66e-07,22;UBERON:0003894,6.66e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.265059536642971,0.464775771478074,0.518305275076852,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,0,4.13552934676983,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38854272215878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.83691564816031,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0.23056390438806,0.807818799687949,1.4124158349861,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0.326465616318295,0.282706142867882,0,6.96683351754953,2.38835424159016,6.11030144933625,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,1.15272333723285,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,1.16495949527454,0.315132729228895,0.329663433524666,0.202210631562555,0,0,0,0,0.643012593860077,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12932817873289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,1.66851121451744,0.11796972334774,0,0,0,0,0,0,0,0,1.30953347240711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0.0714765441766563,0.158013611732727,0.116241425368125,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,2.39239890134628,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0.109265571963696,0.126698501011437,1.42784361638774,0.534434810531121,5.329904173021,2.25636785363138,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.265059536642971,0.464775771478074,0.518305275076852,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,0,4.13552934676983,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38854272215878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.83691564816031,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0.23056390438806,0.807818799687949,1.4124158349861,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0.326465616318295,0.282706142867882,0,6.96683351754953,2.38835424159016,6.11030144933625,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,1.15272333723285,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,1.16495949527454,0.315132729228895,0.329663433524666,0.202210631562555,0,0,0,0,0.643012593860077,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12932817873289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,1.66851121451744,0.11796972334774,0,0,0,0,0,0,0,0,1.30953347240711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0.0714765441766563,0.158013611732727,0.116241425368125,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,2.39239890134628,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0.109265571963696,0.126698501011437,1.42784361638774,0.534434810531121,5.329904173021,2.25636785363138,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr19:4284765..4284786,+ | |||
}} | }} |
Latest revision as of 08:57, 26 July 2015
Short description: | p@chr19:4284765..4284786, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:4284765..4284786, + |
Coexpression cluster: | C3800_Hepatocyte_colon_small_Intestinal_testicular_liver_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.90e-21 | 7 |
germ cell | 4.90e-21 | 7 |
hepatocyte | 1.86e-07 | 12 |
endodermal cell | 6.56e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.26e-24 | 17 |
gastrointestinal system | 2.43e-21 | 25 |
colon | 9.72e-17 | 9 |
large intestine | 9.76e-14 | 11 |
testis | 6.95e-11 | 8 |
vermiform appendix | 1.89e-10 | 1 |
caecum | 1.89e-10 | 1 |
midgut | 1.89e-10 | 1 |
digestive tract diverticulum | 7.02e-10 | 23 |
subdivision of digestive tract | 4.44e-09 | 118 |
sac | 1.01e-08 | 26 |
digestive system | 2.17e-08 | 145 |
digestive tract | 2.17e-08 | 145 |
primitive gut | 2.17e-08 | 145 |
small intestine | 4.22e-08 | 4 |
male reproductive organ | 4.73e-08 | 11 |
liver | 5.66e-08 | 19 |
digestive gland | 5.66e-08 | 19 |
liver bud | 5.66e-08 | 19 |
endoderm-derived structure | 2.09e-07 | 160 |
endoderm | 2.09e-07 | 160 |
presumptive endoderm | 2.09e-07 | 160 |
hepatic diverticulum | 6.66e-07 | 22 |
liver primordium | 6.66e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.01e-10 | 1 |
endocrine pancreas cancer | 3.01e-10 | 1 |
pancreatic endocrine carcinoma | 3.01e-10 | 1 |
germ cell and embryonal cancer | 8.04e-07 | 22 |
germ cell cancer | 8.04e-07 | 22 |