FFCP PHASE1:Hg19::chr19:49255886..49255906,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:49255886..49255906,- to FFCP PHASE1:Hg19::chr19:49255886..49255906,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2523 | |EntrezGene=2523 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4012 | |HGNC=4012 | ||
|TSSclassifier=strong | |||
|UniProt=P19526 | |UniProt=P19526 | ||
|association_with_transcript=-39bp_to_M35531_5end | |||
|cluster_id=chr19:49255886..49255906,- | |||
|description=CAGE_peak_1_at_FUT1_5end | |||
|id=chr19:49255886..49255906,- | |||
|ontology_enrichment_celltype=CL:0000066!5.10e-28!254;CL:0000076!3.05e-12!62;CL:0002139!3.31e-11!24;CL:0000115!1.78e-10!35;CL:0002076!2.38e-10!43;CL:0000071!5.53e-09!18;CL:0002546!5.53e-09!18;CL:0000223!1.79e-08!59;CL:0002368!9.67e-08!13;CL:0002078!3.21e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.75e-13;42!CL:0002368;1.57e-12;13!CL:0002139;2.72e-12;24!CL:0000071;5.22e-12;18!CL:1000413;3.82e-09;9!CL:0002251;6.00e-09;20!CL:0000076;2.04e-08;63!CL:0000115;3.93e-08;36!CL:0002202;9.45e-08;9!CL:0002632;9.45e-08;9!CL:0000244;1.73e-07;4!CL:0000731;1.73e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.26e-27,253;CL:0002076,6.82e-17,42;CL:0000076,8.06e-17,63;CL:0002368,4.60e-13,13;CL:0002139,3.48e-12,24;CL:0000223,3.66e-12,58;CL:0000071,4.95e-12,18;CL:0002546,4.95e-12,18;CL:0000115,5.31e-10,36;CL:1000413,3.43e-09,9;CL:0002251,8.62e-09,20;CL:0002202,4.82e-08,9;CL:0002632,4.82e-08,9;CL:0000244,1.84e-07,4;CL:0000731,1.84e-07,4;CL:0002078,5.43e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;5.22e-12;18!CL:0000223;9.99e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!1.30e-08!14;DOID:305!3.26e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.35e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.84e-13,14;DOID:305,7.04e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.97e-12!169;UBERON:0000925!2.97e-12!169;UBERON:0006595!2.97e-12!169;UBERON:0004111!8.69e-12!241;UBERON:0005911!1.51e-09!82;UBERON:0001007!3.27e-09!155;UBERON:0001555!3.27e-09!155;UBERON:0007026!3.27e-09!155;UBERON:0001986!5.53e-09!18;UBERON:0004638!5.53e-09!18;UBERON:0004852!5.53e-09!18;UBERON:0000483!5.86e-09!309;UBERON:0000119!6.39e-09!312;UBERON:0004921!5.06e-08!129;UBERON:0004185!5.06e-08!129;UBERON:0000487!7.28e-08!22;UBERON:0000466!8.11e-08!126;UBERON:0000077!9.54e-08!130;UBERON:0000477!1.39e-07!286;UBERON:0005157!1.71e-07!51;UBERON:0000025!2.50e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.22e-12;18!UBERON:0001986;5.22e-12;18!UBERON:0004852;5.22e-12;18!UBERON:0000487;1.34e-10;22!UBERON:0000490;1.98e-09;33!UBERON:0003915;3.82e-09;9!UBERON:0004700;3.82e-09;9!UBERON:0001917;3.82e-09;9!UBERON:0006914;7.31e-09;25!UBERON:0005911;1.30e-08;36!UBERON:0000365;2.25e-08;5!UBERON:0000486;3.95e-07;12!UBERON:0004807;4.26e-07;22!UBERON:0005910;7.36e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.95e-12,18;UBERON:0001986,4.95e-12,18;UBERON:0004852,4.95e-12,18;UBERON:0004119,8.36e-12,160;UBERON:0000925,8.36e-12,160;UBERON:0006595,8.36e-12,160;UBERON:0000487,1.26e-10,22;UBERON:0003915,3.43e-09,9;UBERON:0004700,3.43e-09,9;UBERON:0001917,3.43e-09,9;UBERON:0006914,6.91e-09,25;UBERON:0000365,2.14e-08,5;UBERON:0001004,5.12e-08,74;UBERON:0005911,6.15e-08,82;UBERON:0001007,6.38e-08,145;UBERON:0001555,6.38e-08,145;UBERON:0007026,6.38e-08,145;UBERON:0005157,1.25e-07,47;UBERON:0005181,2.29e-07,35;UBERON:0000065,5.69e-07,54;UBERON:0005910,7.07e-07,6 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,1.47440361900905,2.79120467188971,0,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,1.83884244895785,3.91567694411725,3.69754010166788,0,0,0.293600439334847,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0.50133791063589,0,0,0.486634870302636,0,0,0,0.589405839739707,5.46442932438813,2.22470665670658,0,0,0,0,0,0,1.39133685156694,3.4409383804245,2.42998351125316,1.13061588384802,1.67799774483962,2.20094433552054,2.71693456497854,0.516833518338658,1.06729878806013,1.33888245105868,0.402829317109147,1.52054421143703,1.46437234528902,1.83831540172934,0.81014194788176,1.16089646769304,1.34717623575702,1.68917220724983,0,0.949265659568129,3.66403487860815,0,0,3.48875241714027,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0.560677600142307,1.06748995729705,1.2333377420858,0,0.134710672069688,0,0,0,0.937285727335186,0,0.570471821544449,0,0.117434498643765,0,0,0.204154171254893,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0.211931901159562,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,1.73934767846967,1.63647672354501,3.44165514466805,1.21973706129595,0.397589304964456,0.929551542956147,0.518305275076852,0.756962552626885,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0.738155454624648,2.80483547606892,0.8231480226628,0,1.26755034821831,0,0,0,0.368965315629341,0,0.878002283269004,4.49607013030478,1.70899253099772,1.38882667737794,0,1.03993478527958,0,0,0.117408694235822,1.58803092537181,0.925971025153221,0.951270761172991,3.95102198979638,0.858486162094873,0,0,0,0.93733833986777,1.51183915378974,0.992425680696705,1.16426079513703,3.48760726216754,4.98397482914775,0,0.352193736052904,2.07328115540772,2.01767934783746,2.01987893482208,0.126995788584338,0.763976851116555,0,1.71072446022705,0.205654985406647,0.901029173531752,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,1.56919201590938,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0.606255142892519,0,0.604780586659361,0,0,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0.725156697549733,3.00759705454927,3.03867263488458,0.229628896329213,0,0,1.35359883872224,0.539107359730903,0,2.92278449306521,0.211103257785751,1.13733384070897,0.850468526382578,0,0,0.812839312631559,0.501689773854853,0,0.831076008928724,0,0.438519753291869,0.784306353074702,0.256450125116389,0.656029291399411,0,0.515205058238611,0,0.082509499920588,1.72279661398852,2.60024098414608,0,0.193341436584244,0,0,0,0,0,0,0,2.47927373041467,1.92190067365106,3.1903178123646,3.94515345336645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0.235624804691373,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0.196498082026242,0,0,0,0,0,0.699869440489966,2.88666338176536,2.68120910214315,7.62236894029258,0.564862804660675,4.3050537267123,5.05414427002877,4.43430153536676,2.52695740227655,0,0,0,0,0,0,0,0,0,0,3.67560323971548,0,0,0,0,0.199579371432817,0,2.32840940996271,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,1.23087398947712,0.540911356951966,1.6653598399891,7.04935025439248,0.18714054040822,1.02555725490326,0,1.33732061132974,0,0.95497793895076,0,0,0,0,0,0,1.90012867315194,0.597743964753209,0.276283915531148,0,0.102268682502155,0,0,1.52776196950456,2.32727527078292,0,0.493217028184668,0,0,0,0.371072392647405,0,2.86470537193757,0.349839999984783,3.62499787717397,1.365521379426,0.254253650292766,1.89110145414349,1.03423011972439,0,0.694499979733169,0,0,3.05163472634166,0.995213339381022,0.295547618953547,0.438770794307945,0.10893846351899,9.06254337810921,0.307801034015188,0.455768223388005,0.46112780877612,0.269272933229316,0.217294743844016,0,0,0.533034776018635,0,0.470940769185074,3.8228686837036,0,0.19606253431774,0.167821586975843,0,4.4502242114506,0,0.652931232636591,1.13082457147153,0,0,0.265372693510018,0.611030144933625,0,0,0,0.134802265961354,1.60515529459758,0,0,0.978323094660449,0,0.789168805698781,2.41981432097328,0,0.442306057399416,4.50970258243478,0.311064574191741,0,0,0,0,0,0,0.867798691675654,2.93977192243133,0.174118413160805,0.698906672968121,0.171986032471617,0.290268993867255,0.438535902517113,0.328461828212837,0.678923115418936,0,0.677942222341597,0,0,0.189932387867636,3.32437350649165,0.0801588202515337,0.85381197895741,0.599428828746391,1.29681375438695,0,0,0,1.11827282008889,2.82832841540154,0.271808412147228,0.104602846312333,0.203996435272644,0,0,0.410716136675979,0,0,0,1.11712960508902,0.687481272035051,2.15361907373044,0.998395002494955,0,1.11585728720936,0.3359173624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| ||
|short_description=p1@FUT1 | |||
}} | }} |
Latest revision as of 04:01, 19 September 2015
Short description: | p1@FUT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FUT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_M35531_5end |
EntrezGene: | FUT1 |
HGNC: | 4012 |
UniProt: | P19526 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.26e-27 | 253 |
endo-epithelial cell | 6.82e-17 | 42 |
squamous epithelial cell | 8.06e-17 | 63 |
respiratory epithelial cell | 4.60e-13 | 13 |
endothelial cell of vascular tree | 3.48e-12 | 24 |
endodermal cell | 3.66e-12 | 58 |
blood vessel endothelial cell | 4.95e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.95e-12 | 18 |
endothelial cell | 5.31e-10 | 36 |
endothelial cell of artery | 3.43e-09 | 9 |
epithelial cell of alimentary canal | 8.62e-09 | 20 |
epithelial cell of tracheobronchial tree | 4.82e-08 | 9 |
epithelial cell of lower respiratory tract | 4.82e-08 | 9 |
transitional epithelial cell | 1.84e-07 | 4 |
urothelial cell | 1.84e-07 | 4 |
meso-epithelial cell | 5.43e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.95e-12 | 18 |
endothelium | 4.95e-12 | 18 |
cardiovascular system endothelium | 4.95e-12 | 18 |
endoderm-derived structure | 8.36e-12 | 160 |
endoderm | 8.36e-12 | 160 |
presumptive endoderm | 8.36e-12 | 160 |
simple squamous epithelium | 1.26e-10 | 22 |
endothelial tube | 3.43e-09 | 9 |
arterial system endothelium | 3.43e-09 | 9 |
endothelium of artery | 3.43e-09 | 9 |
squamous epithelium | 6.91e-09 | 25 |
urothelium | 2.14e-08 | 5 |
respiratory system | 5.12e-08 | 74 |
endo-epithelium | 6.15e-08 | 82 |
digestive system | 6.38e-08 | 145 |
digestive tract | 6.38e-08 | 145 |
primitive gut | 6.38e-08 | 145 |
epithelial fold | 1.25e-07 | 47 |
thoracic segment organ | 2.29e-07 | 35 |
respiratory tract | 5.69e-07 | 54 |
transitional epithelium | 7.07e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.84e-13 | 14 |
carcinoma | 7.04e-07 | 106 |