FFCP PHASE1:Hg19::chr19:51472686..51472697,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:51472686..51472697,- | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_at_chr19:51472686..51472697,- | |||
|id=chr19:51472686..51472697,- | |||
|ontology_enrichment_celltype=CL:0000066!1.05e-17!254;CL:1000415!3.83e-13!2;CL:0000223!1.55e-10!59;CL:0002076!3.75e-10!43;CL:0000239!3.11e-09!3;CL:1000615!3.11e-09!3;CL:0002306!3.11e-09!3;CL:0000313!2.35e-07!1;CL:0002251!3.54e-07!21;CL:0000083!6.07e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.22e-14;3!CL:0002251;5.26e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.22e-14,3;CL:0002251,5.26e-09,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.99e-34!106;DOID:0050687!5.60e-24!143;DOID:1749!1.26e-20!14;DOID:299!4.91e-19!25;DOID:3493!9.14e-14!2;DOID:4074!4.89e-13!2;DOID:4905!4.89e-13!2;DOID:3498!4.89e-13!2;DOID:162!1.71e-12!235;DOID:14566!3.97e-12!239;DOID:3111!8.54e-08!1;DOID:3603!8.54e-08!1;DOID:2152!2.35e-07!1;DOID:1793!6.07e-07!4;DOID:1324!8.09e-07!15;DOID:7!8.88e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:3111;2.21e-40;1!DOID:3603;2.21e-40;1!DOID:299;6.98e-26;25!DOID:3493;3.11e-21;2!DOID:4929;5.69e-21;2!DOID:3119;2.24e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,3.30e-40,1;DOID:3603,3.30e-40,1;DOID:299,6.98e-26,25;DOID:3493,3.11e-21,2;DOID:4929,4.66e-21,2;DOID:3119,2.12e-12,14;DOID:305,5.66e-10,106;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003343!1.51e-14!4;UBERON:0004785!1.51e-14!4;UBERON:0002294!3.22e-14!7;UBERON:0001173!3.22e-14!7;UBERON:0004912!3.22e-14!7;UBERON:0000344!1.21e-12!12;UBERON:0003729!9.67e-12!5;UBERON:0001007!3.95e-10!155;UBERON:0001555!3.95e-10!155;UBERON:0007026!3.95e-10!155;UBERON:0006853!3.11e-09!3;UBERON:0007685!3.11e-09!3;UBERON:0004134!3.11e-09!3;UBERON:0000466!4.42e-09!126;UBERON:0002110!4.68e-09!3;UBERON:0006242!4.68e-09!3;UBERON:0004119!5.62e-09!169;UBERON:0000925!5.62e-09!169;UBERON:0006595!5.62e-09!169;UBERON:0000077!1.06e-08!130;UBERON:0000464!1.17e-08!104;UBERON:0000058!6.33e-08!26;UBERON:0004913!7.50e-08!1;UBERON:0003703!7.50e-08!1;UBERON:0001174!7.50e-08!1;UBERON:0004914!7.50e-08!1;UBERON:0004921!1.77e-07!129;UBERON:0004185!1.77e-07!129;UBERON:0004911!2.35e-07!1;UBERON:0005153!2.52e-07!37;UBERON:0000997!2.66e-07!1;UBERON:0005056!2.66e-07!1;UBERON:0002394!4.22e-07!4;UBERON:0003928!4.22e-07!4;UBERON:0002372!4.90e-07!1;UBERON:0001961!4.90e-07!1;UBERON:0001744!4.90e-07!1;UBERON:0001735!4.90e-07!1;UBERON:0005177!4.93e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.21e-40;1!UBERON:0003703;2.21e-40;1!UBERON:0001174;2.21e-40;1!UBERON:0004914;2.21e-40;1!UBERON:0002114;1.83e-14;2!UBERON:0003343;2.80e-11;4!UBERON:0004785;2.80e-11;4!UBERON:0002394;3.42e-11;4!UBERON:0003928;3.42e-11;4!UBERON:0000945;2.53e-09;5!UBERON:0010039;2.53e-09;5!UBERON:0002108;3.22e-09;4!UBERON:0000344;5.93e-09;20!UBERON:0000974;5.92e-08;6!UBERON:0005409;6.29e-08;22!UBERON:0002294;6.04e-07;7!UBERON:0001173;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.48e-40,1;UBERON:0003703,1.48e-40,1;UBERON:0001174,1.48e-40,1;UBERON:0004914,1.48e-40,1;UBERON:0002114,1.60e-14,2;UBERON:0003343,2.80e-11,4;UBERON:0004785,2.80e-11,4;UBERON:0002108,2.97e-09,4;UBERON:0000344,6.17e-09,20;UBERON:0002394,6.34e-08,6;UBERON:0003928,6.34e-08,6;UBERON:0005409,3.90e-07,25 | |||
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|short_description=p@chr19:51472686..51472697,- | |||
}} | }} |
Latest revision as of 16:35, 27 July 2015
Short description: | p@chr19:51472686..51472697, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:51472686..51472697, - |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.22e-14 | 3 |
epithelial cell of alimentary canal | 5.26e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.48e-40 | 1 |
extrahepatic bile duct | 1.48e-40 | 1 |
common bile duct | 1.48e-40 | 1 |
duodenal papilla | 1.48e-40 | 1 |
duodenum | 1.60e-14 | 2 |
mucosa of oral region | 2.80e-11 | 4 |
respiratory system mucosa | 2.80e-11 | 4 |
small intestine | 2.97e-09 | 4 |
mucosa | 6.17e-09 | 20 |
bile duct | 6.34e-08 | 6 |
digestive system duct | 6.34e-08 | 6 |
gastrointestinal system | 3.90e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.30e-40 | 1 |
mucinous cystadenocarcinoma | 3.30e-40 | 1 |
adenocarcinoma | 6.98e-26 | 25 |
signet ring cell adenocarcinoma | 3.11e-21 | 2 |
tubular adenocarcinoma | 4.66e-21 | 2 |
gastrointestinal system cancer | 2.12e-12 | 14 |
carcinoma | 5.66e-10 | 106 |
cell type cancer | 1.55e-07 | 143 |