FFCP PHASE1:Hg19::chr19:58095501..58095535,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:58095501..58095535,+ to FFCP PHASE1:Hg19::chr19:58095501..58095535,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=284307 | |EntrezGene=284307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33104 | |HGNC=33104 | ||
|TSSclassifier=strong | |||
|UniProt=A6NLI9,F5H435 | |UniProt=A6NLI9,F5H435 | ||
|association_with_transcript=0bp_to_ENST00000356724,ENST00000536878_5end | |||
|cluster_id=chr19:58095501..58095535,+ | |||
|description=CAGE_peak_1_at_ZIK1_5end | |||
|id=chr19:58095501..58095535,+ | |||
|ontology_enrichment_celltype=CL:0000047!9.83e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.20e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.86e-09!86;UBERON:0000073!5.37e-09!94;UBERON:0001016!5.37e-09!94;UBERON:0004121!3.00e-08!169;UBERON:0001017!3.34e-08!82;UBERON:0000924!4.13e-08!173;UBERON:0006601!4.13e-08!173;UBERON:0007023!2.57e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.38e-09,171;UBERON:0000924,4.38e-09,171;UBERON:0006601,4.38e-09,171;UBERON:0001017,1.84e-08,81;UBERON:0001016,2.72e-08,89;UBERON:0007023,6.76e-07,114;UBERON:0010314,6.80e-07,132;UBERON:0003075,9.68e-07,82;UBERON:0007284,9.68e-07,82 | |||
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| ||
|short_description=p1@ZIK1 | |||
}} | }} |
Latest revision as of 05:55, 20 September 2015
Short description: | p1@ZIK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZIK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000356724, ENST00000536878_5end |
EntrezGene: | ZIK1 |
HGNC: | 33104 |
UniProt: | A6NLI9F5H435 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.20e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.38e-09 | 171 |
ectoderm | 4.38e-09 | 171 |
presumptive ectoderm | 4.38e-09 | 171 |
central nervous system | 1.84e-08 | 81 |
nervous system | 2.72e-08 | 89 |
adult organism | 6.76e-07 | 114 |
structure with developmental contribution from neural crest | 6.80e-07 | 132 |
neural plate | 9.68e-07 | 82 |
presumptive neural plate | 9.68e-07 | 82 |