FFCP PHASE1:Hg19::chr1:16342171..16342200,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:16342171..16342200,- to FFCP PHASE1:Hg19::chr1:16342171..16342200,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B4DKJ9 | |UniProt=B4DKJ9 | ||
|association_with_transcript=-43bp_to_AK296598_5end | |||
|cluster_id=chr1:16342171..16342200,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_5_at_AK296598_5end | |||
|id=chr1:16342171..16342200,- | |||
|ontology_enrichment_celltype=CL:0000136!5.89e-16!15 | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.09e-13;3!CL:0002579;4.25e-13;3!CL:0000136;1.31e-11;13!CL:0002617;4.10e-10;2!CL:0002334;8.09e-09;12!CL:0002580;4.95e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.03e-17,15;CL:0002615,8.00e-14,3;CL:0002579,5.62e-13,3;CL:0002617,4.59e-10,2;CL:0002334,8.97e-09,12;CL:0002580,4.88e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.17e-10;4!UBERON:0007284;1.17e-10;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;9.62e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.63e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!5.01e-10!6;UBERON:0002358!5.01e-10!6;UBERON:0003684!5.01e-10!6;UBERON:0001178!5.01e-10!6;UBERON:0007023!3.46e-08!115;UBERON:0004457!7.74e-08!12;UBERON:0000042!7.74e-08!12;UBERON:0007100!2.51e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.03e-25;6!UBERON:0002358;5.03e-25;6!UBERON:0003684;5.03e-25;6!UBERON:0001178;5.03e-25;6!UBERON:0004457;2.14e-22;9!UBERON:0000042;2.14e-22;9!UBERON:0004151;2.05e-14;3!UBERON:0003978;4.70e-14;3!UBERON:0000946;4.70e-14;3!UBERON:0007100;1.81e-13;25!UBERON:0005090;2.32e-10;2!UBERON:0001630;2.32e-10;2!UBERON:0001443;3.47e-10;11!UBERON:0002081;6.15e-10;2!UBERON:0002133;1.17e-09;2!UBERON:0000310;1.88e-07;10!UBERON:0001723;3.30e-07;3!UBERON:0001033;3.30e-07;3!UBERON:0000948;6.08e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.93e-25,6;UBERON:0002358,4.93e-25,6;UBERON:0003684,4.93e-25,6;UBERON:0001178,4.93e-25,6;UBERON:0004457,1.55e-16,12;UBERON:0000042,1.55e-16,12;UBERON:0004151,1.75e-14,3;UBERON:0003978,3.76e-14,3;UBERON:0009751,3.76e-14,3;UBERON:0000946,3.76e-14,3;UBERON:0002523,3.76e-14,3;UBERON:0005983,3.76e-14,3;UBERON:0002165,3.76e-14,3;UBERON:0002062,3.76e-14,3;UBERON:0007280,3.76e-14,3;UBERON:0007100,2.24e-12,27;UBERON:0005090,2.43e-10,2;UBERON:0001630,2.43e-10,2;UBERON:0001443,3.69e-10,11;UBERON:0002081,5.26e-10,2;UBERON:0010227,5.26e-10,2;UBERON:0002133,9.39e-10,2;UBERON:0000310,1.95e-07,10;UBERON:0003103,3.02e-07,68;UBERON:0001723,3.20e-07,3;UBERON:0001033,3.20e-07,3;UBERON:0010056,3.20e-07,3 | |||
|phase1_expression=2.36181893051724,7.27941781229343,1.83240725324762,3.00219895059391,2.68176656656373,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.724232594804119,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.515262646192195,0.515281080091258,0.930584281657949,0.168776332241266,0.974370051611986,0,0.184099797284599,0,0,1.30977727695932,0.339121184620975,0,0,0,0,0,0,0,0,0,0,2.57296375277154,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0.241011029883482,0.330881918197182,0.435758888184812,0.474541238222193,0.539325232640658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.904318131178758,0,0,0,0,0,0,0,0,0.434343920002738,0.61642896765115,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0.356857977594324,0.157702415033935,0.234282829985426,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0,3.47350930946288,0.61384789315225,5.61320188866147,1.15325234330131,1.02341449813341,1.28683136914886,0,0,0,0,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00726411300178,0.330037999682352,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0.354761064070598,2.11107635297664,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,2.78947183551498,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01288823649394,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.581934098930517,0,1.12990370390266,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6306712165393,8.02061484040893,1.43574604915363,24.7601960618749,61.8085509316662,4.01708623395371,5.24031085396465,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0.157611414598396,0,0,0,0,10.0057345692271,23.8353109331555,0,1.08599920350743,1.72844298240254,0.653174720218818,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,1.0027595760908,0.306345576763462,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0.398095888698616,0.400027764663154,5.15093557774189,6.06149079778654,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71143255781842,4.10651227424988,0,2.4285549652957,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,1.71603825227734,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,1.48798007266701,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,2.98527574661373,0.714193294391221,0,0,0.224263725161227,0.190941474834495,0,7.62008617639365,6.50243272062034,0.0673520530145875,0.0717222053926763,1.33064142618405,0,0,0,0,11.7320471201727,0.488965776731466,0.406896178315738,0,0.402547587182052,0 | |phase1_expression=2.36181893051724,7.27941781229343,1.83240725324762,3.00219895059391,2.68176656656373,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.724232594804119,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.515262646192195,0.515281080091258,0.930584281657949,0.168776332241266,0.974370051611986,0,0.184099797284599,0,0,1.30977727695932,0.339121184620975,0,0,0,0,0,0,0,0,0,0,2.57296375277154,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0.241011029883482,0.330881918197182,0.435758888184812,0.474541238222193,0.539325232640658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.904318131178758,0,0,0,0,0,0,0,0,0.434343920002738,0.61642896765115,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0.356857977594324,0.157702415033935,0.234282829985426,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0,3.47350930946288,0.61384789315225,5.61320188866147,1.15325234330131,1.02341449813341,1.28683136914886,0,0,0,0,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00726411300178,0.330037999682352,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0.354761064070598,2.11107635297664,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,2.78947183551498,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01288823649394,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.581934098930517,0,1.12990370390266,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6306712165393,8.02061484040893,1.43574604915363,24.7601960618749,61.8085509316662,4.01708623395371,5.24031085396465,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0.157611414598396,0,0,0,0,10.0057345692271,23.8353109331555,0,1.08599920350743,1.72844298240254,0.653174720218818,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,1.0027595760908,0.306345576763462,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0.398095888698616,0.400027764663154,5.15093557774189,6.06149079778654,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71143255781842,4.10651227424988,0,2.4285549652957,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,1.71603825227734,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,1.48798007266701,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,2.98527574661373,0.714193294391221,0,0,0.224263725161227,0.190941474834495,0,7.62008617639365,6.50243272062034,0.0673520530145875,0.0717222053926763,1.33064142618405,0,0,0,0,11.7320471201727,0.488965776731466,0.406896178315738,0,0.402547587182052,0 | ||
|short_description=p5@AK296598 | |||
}} | }} |
Latest revision as of 08:32, 18 September 2015
Short description: | p5@AK296598 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AK296598_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -43bp_to_AK296598_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.03e-17 | 15 |
adipocyte of omentum tissue | 8.00e-14 | 3 |
omentum preadipocyte | 5.62e-13 | 3 |
adipocyte of breast | 4.59e-10 | 2 |
preadipocyte | 8.97e-09 | 12 |
preadipocyte of the breast | 4.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.93e-25 | 6 |
peritoneum | 4.93e-25 | 6 |
abdominal cavity | 4.93e-25 | 6 |
visceral peritoneum | 4.93e-25 | 6 |
cavity lining | 1.55e-16 | 12 |
serous membrane | 1.55e-16 | 12 |
cardiac chamber | 1.75e-14 | 3 |
valve | 3.76e-14 | 3 |
cardiac mesenchyme | 3.76e-14 | 3 |
cardial valve | 3.76e-14 | 3 |
tunica intima | 3.76e-14 | 3 |
heart layer | 3.76e-14 | 3 |
endocardium | 3.76e-14 | 3 |
endocardial cushion | 3.76e-14 | 3 |
presumptive endocardium | 3.76e-14 | 3 |
primary circulatory organ | 2.24e-12 | 27 |
muscle structure | 2.43e-10 | 2 |
muscle organ | 2.43e-10 | 2 |
chest | 3.69e-10 | 11 |
cardiac atrium | 5.26e-10 | 2 |
future cardiac atrium | 5.26e-10 | 2 |
atrioventricular valve | 9.39e-10 | 2 |
breast | 1.95e-07 | 10 |
compound organ | 3.02e-07 | 68 |
tongue | 3.20e-07 | 3 |
gustatory system | 3.20e-07 | 3 |
future tongue | 3.20e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.63e-11 | 2 |