FFCP PHASE1:Hg19::chr1:246382992..246383003,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:246382992..246383003,- | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_at_chr1:246382992..246383003,- | |||
|id=chr1:246382992..246383003,- | |||
|ontology_enrichment_celltype=CL:0002274!2.36e-35!5;CL:0000457!2.36e-35!5;CL:0002191!2.36e-35!5;CL:0000097!2.36e-35!5;CL:0000831!2.36e-35!5;CL:0002028!2.36e-35!5;CL:0000163!5.73e-28!9;CL:0002553!9.79e-09!1;CL:0000167!1.52e-08!1;CL:0000164!1.52e-08!1;CL:0000502!1.52e-08!1;CL:0000172!1.52e-08!1;CL:0000173!1.52e-08!1;CL:0002351!1.52e-08!1;CL:0000151!8.41e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002553;6.62e-41;1!CL:0000082;2.12e-09;19!CL:0000097;3.10e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,6.62e-41,1;CL:0000082,2.17e-09,19;CL:0000097,2.74e-09,5;CL:0002028,2.74e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4430!1.52e-08!1;DOID:0050619!1.88e-08!1;DOID:1357!1.88e-08!1;DOID:225!3.10e-08!1;DOID:8692!1.24e-07!31;DOID:0050686!2.77e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.24e-11;15!DOID:5409;3.26e-11;4!DOID:0050615;5.69e-11;16!DOID:1325;5.86e-07;7!DOID:3904;5.86e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.27e-11,15;DOID:5409,3.42e-11,4;DOID:0050615,5.84e-11,16;DOID:1325,6.04e-07,7;DOID:3904,6.04e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001764!1.88e-08!1;UBERON:0001825!1.88e-08!1;UBERON:0002372!6.24e-08!1;UBERON:0001961!6.24e-08!1;UBERON:0001744!6.24e-08!1;UBERON:0001735!6.24e-08!1;UBERON:0002022!7.16e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;2.12e-09;19!UBERON:0000115;2.12e-09;19!UBERON:0002048;2.98e-08;22!UBERON:0004807;2.98e-08;22!UBERON:0000117;2.98e-08;22!UBERON:0000171;2.98e-08;22!UBERON:0000170;2.98e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,2.17e-09,19;UBERON:0000115,2.17e-09,19;UBERON:0002048,3.04e-08,22;UBERON:0000117,3.04e-08,22;UBERON:0000171,3.04e-08,22;UBERON:0000170,3.04e-08,22;UBERON:0005597,3.04e-08,22;UBERON:0000118,3.04e-08,22 | |||
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|short_description=p@chr1:246382992..246383003,- | |||
}} | }} |
Latest revision as of 06:04, 28 July 2015
Short description: | p@chr1:246382992..246383003, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:246382992..246383003, - |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 6.62e-41 | 1 |
epithelial cell of lung | 2.17e-09 | 19 |
mast cell | 2.74e-09 | 5 |
basophil mast progenitor cell | 2.74e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 2.17e-09 | 19 |
lung epithelium | 2.17e-09 | 19 |
lung | 3.04e-08 | 22 |
respiratory tube | 3.04e-08 | 22 |
respiration organ | 3.04e-08 | 22 |
pair of lungs | 3.04e-08 | 22 |
lung primordium | 3.04e-08 | 22 |
lung bud | 3.04e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.27e-11 | 15 |
lung small cell carcinoma | 3.42e-11 | 4 |
respiratory system cancer | 5.84e-11 | 16 |
bronchus cancer | 6.04e-07 | 7 |
bronchogenic carcinoma | 6.04e-07 | 7 |