FFCP PHASE1:Hg19::chr20:3776936..3776964,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:3776936..3776964,+ to FFCP PHASE1:Hg19::chr20:3776936..3776964,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=994 | |EntrezGene=994 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1726 | |HGNC=1726 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000439880_5end | |||
|cluster_id=chr20:3776936..3776964,+ | |||
|description=CAGE_peak_1_at_CDC25B_5end | |||
|id=chr20:3776936..3776964,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.72e-13!254;CL:0000003!7.12e-09!722;CL:0000220!1.09e-08!246;CL:0002321!2.36e-08!248;CL:0000791!2.57e-07!18;CL:0000789!2.57e-07!18;CL:0002420!2.57e-07!18;CL:0002419!2.57e-07!18;CL:0000790!2.57e-07!18;CL:0000084!7.53e-07!25;CL:0000827!7.53e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.47e-07;18!CL:0000789;2.47e-07;18!CL:0002419;2.47e-07;18!CL:0000084;7.10e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.10e-12,253;CL:0002321,1.27e-08,250;CL:0000791,2.57e-07,18;CL:0000789,2.57e-07,18;CL:0002420,2.57e-07,18;CL:0002419,2.57e-07,18;CL:0000790,2.57e-07,18;CL:0000084,7.53e-07,25;CL:0000827,7.53e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;2.47e-07;18 | |||
|ontology_enrichment_disease=DOID:0050687!2.18e-16!143;DOID:162!4.37e-13!235;DOID:305!1.36e-12!106;DOID:14566!2.22e-12!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.18e-16,143;DOID:162,4.37e-13,235;DOID:305,1.36e-12,106;DOID:14566,2.22e-12,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@CDC25B | |||
}} | }} |
Latest revision as of 04:27, 16 September 2015
Short description: | p1@CDC25B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDC25B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000439880_5end |
EntrezGene: | CDC25B |
HGNC: | 1726 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.10e-12 | 253 |
embryonic cell | 1.27e-08 | 250 |
mature alpha-beta T cell | 2.57e-07 | 18 |
alpha-beta T cell | 2.57e-07 | 18 |
immature T cell | 2.57e-07 | 18 |
mature T cell | 2.57e-07 | 18 |
immature alpha-beta T cell | 2.57e-07 | 18 |
T cell | 7.53e-07 | 25 |
pro-T cell | 7.53e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.18e-16 | 143 |
cancer | 4.37e-13 | 235 |
carcinoma | 1.36e-12 | 106 |
disease of cellular proliferation | 2.22e-12 | 239 |