FFCP PHASE1:Hg19::chr2:208634613..208634638,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:208634613..208634638,- to FFCP PHASE1:Hg19::chr2:208634613..208634638,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7855 | |EntrezGene=7855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4043 | |HGNC=4043 | ||
|TSSclassifier=strong | |||
|UniProt=Q13467 | |UniProt=Q13467 | ||
|association_with_transcript=-326bp_to_ENST00000295417_5end | |||
|cluster_id=chr2:208634613..208634638,- | |||
|description=CAGE_peak_1_at_FZD5_5end | |||
|id=chr2:208634613..208634638,- | |||
|ontology_enrichment_celltype=CL:0000066!4.80e-12!254;CL:0000223!7.42e-12!59;CL:0002076!1.75e-07!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.07e-12,58;CL:0000066,2.08e-10,253;CL:0002076,9.74e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.28e-07;31!CL:0000223;2.52e-07;58!UBERON:0001041;5.42e-07;30 | |||
|ontology_enrichment_disease=DOID:305!3.20e-11!106;DOID:0050687!1.00e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.91e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0000062!1.50e-17!511;UBERON:0007023!2.30e-16!115;UBERON:0004119!5.09e-12!169;UBERON:0000925!5.09e-12!169;UBERON:0006595!5.09e-12!169;UBERON:0000468!8.93e-12!659;UBERON:0000922!1.69e-11!612;UBERON:0001007!9.35e-11!155;UBERON:0001555!9.35e-11!155;UBERON:0007026!9.35e-11!155;UBERON:0004921!5.93e-10!129;UBERON:0004185!5.93e-10!129;UBERON:0000467!1.91e-09!625;UBERON:0000480!1.94e-09!626;UBERON:0002050!2.77e-09!605;UBERON:0005423!2.77e-09!605;UBERON:0000923!3.91e-09!604;UBERON:0005291!3.91e-09!604;UBERON:0006598!3.91e-09!604;UBERON:0002532!3.91e-09!604;UBERON:0005743!1.29e-08!86;UBERON:0001017!2.58e-08!82;UBERON:0005911!3.77e-08!82;UBERON:0000073!7.61e-08!94;UBERON:0001016!7.61e-08!94;UBERON:0000077!1.04e-07!130;UBERON:0000153!1.65e-07!129;UBERON:0007811!1.65e-07!129;UBERON:0004121!2.13e-07!169;UBERON:0005177!2.36e-07!107;UBERON:0000033!2.73e-07!123;UBERON:0000466!3.81e-07!126;UBERON:0000924!4.78e-07!173;UBERON:0006601!4.78e-07!173;UBERON:0001041!5.54e-07!98;UBERON:0001049!8.91e-07!57;UBERON:0005068!8.91e-07!57;UBERON:0006241!8.91e-07!57;UBERON:0007135!8.91e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.17e-16,114;UBERON:0011216,3.19e-14,223;UBERON:0004119,2.62e-11,160;UBERON:0000925,2.62e-11,160;UBERON:0006595,2.62e-11,160;UBERON:0001007,7.55e-10,145;UBERON:0001555,7.55e-10,145;UBERON:0007026,7.55e-10,145;UBERON:0004921,2.91e-09,118;UBERON:0000922,6.37e-08,592;UBERON:0005911,9.71e-08,82;UBERON:0001017,1.43e-07,81;UBERON:0005177,2.11e-07,101;UBERON:0005423,9.28e-07,581;UBERON:0001041,9.49e-07,87 | |||
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| ||
|short_description=p1@FZD5 | |||
}} | }} |
Latest revision as of 19:53, 19 September 2015
Short description: | p1@FZD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FZD5_5end |
Coexpression cluster: | NA |
Association with transcript: | -326bp_to_ENST00000295417_5end |
EntrezGene: | FZD5 |
HGNC: | 4043 |
UniProt: | Q13467 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.07e-12 | 58 |
epithelial cell | 2.08e-10 | 253 |
endo-epithelial cell | 9.74e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.17e-16 | 114 |
organ system subdivision | 3.19e-14 | 223 |
endoderm-derived structure | 2.62e-11 | 160 |
endoderm | 2.62e-11 | 160 |
presumptive endoderm | 2.62e-11 | 160 |
digestive system | 7.55e-10 | 145 |
digestive tract | 7.55e-10 | 145 |
primitive gut | 7.55e-10 | 145 |
subdivision of digestive tract | 2.91e-09 | 118 |
embryo | 6.37e-08 | 592 |
endo-epithelium | 9.71e-08 | 82 |
central nervous system | 1.43e-07 | 81 |
trunk region element | 2.11e-07 | 101 |
developing anatomical structure | 9.28e-07 | 581 |
foregut | 9.49e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.91e-10 | 106 |