FFCP PHASE1:Hg19::chr2:235405168..235405277,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:235405168..235405277,- to FFCP PHASE1:Hg19::chr2:235405168..235405277,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10123 | |EntrezGene=10123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=698 | |HGNC=698 | ||
|TSSclassifier=strong | |||
|UniProt=P56559 | |UniProt=P56559 | ||
|association_with_transcript=0bp_to_ENST00000339728,uc002vvm.3_5end | |||
|cluster_id=chr2:235405168..235405277,- | |||
|coexpression_cluster_id=C4201 | |||
|description=CAGE_peak_2_at_ARL4C_5end | |||
|id=chr2:235405168..235405277,- | |||
|ontology_enrichment_celltype=CL:0000738!1.01e-16!140;CL:0000791!3.23e-12!18;CL:0000789!3.23e-12!18;CL:0002420!3.23e-12!18;CL:0002419!3.23e-12!18;CL:0000790!3.23e-12!18;CL:0000084!4.51e-12!25;CL:0000827!4.51e-12!25;CL:0002087!5.62e-10!119;CL:0002031!1.16e-09!124;CL:0000838!1.70e-08!52;CL:0000542!2.23e-08!53;CL:0000051!2.23e-08!53;CL:0000625!6.28e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.20e-12;18!CL:0000789;1.20e-12;18!CL:0002419;1.20e-12;18!CL:0000084;1.37e-12;25!CL:0000625;3.48e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.49e-21,136;CL:0002087,5.81e-13,115;CL:0002031,7.64e-13,120;CL:0000791,1.25e-12,18;CL:0000789,1.25e-12,18;CL:0002420,1.25e-12,18;CL:0002419,1.25e-12,18;CL:0000790,1.25e-12,18;CL:0000084,1.76e-12,25;CL:0000827,1.76e-12,25;CL:0000838,1.46e-09,52;CL:0000542,2.00e-09,53;CL:0000051,2.00e-09,53;CL:0000037,4.72e-09,168;CL:0000988,1.80e-08,177;CL:0000625,3.56e-08,11;CL:0002032,2.64e-07,161;CL:0000837,2.64e-07,161;CL:0000766,3.10e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;1.20e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!5.26e-08!129;UBERON:0007811!5.26e-08!129;UBERON:0000033!4.52e-07!123;UBERON:0002390!5.45e-07!102;UBERON:0003061!5.45e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.42e-09,98;UBERON:0003061,2.42e-09,98;UBERON:0002193,1.72e-07,108 | |||
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| ||
|short_description=p2@ARL4C | |||
}} | }} |
Latest revision as of 01:21, 16 September 2015
Short description: | p2@ARL4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARL4C_5end |
Coexpression cluster: | C4201_immature_CD4_CD8_Natural_Mast_Basophils_Dendritic |
Association with transcript: | 0bp_to_ENST00000339728, uc002vvm.3_5end |
EntrezGene: | ARL4C |
HGNC: | 698 |
UniProt: | P56559 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.49e-21 | 136 |
nongranular leukocyte | 5.81e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 7.64e-13 | 120 |
mature alpha-beta T cell | 1.25e-12 | 18 |
alpha-beta T cell | 1.25e-12 | 18 |
immature T cell | 1.25e-12 | 18 |
mature T cell | 1.25e-12 | 18 |
immature alpha-beta T cell | 1.25e-12 | 18 |
T cell | 1.76e-12 | 25 |
pro-T cell | 1.76e-12 | 25 |
lymphoid lineage restricted progenitor cell | 1.46e-09 | 52 |
lymphocyte | 2.00e-09 | 53 |
common lymphoid progenitor | 2.00e-09 | 53 |
hematopoietic stem cell | 4.72e-09 | 168 |
hematopoietic cell | 1.80e-08 | 177 |
CD8-positive, alpha-beta T cell | 3.56e-08 | 11 |
hematopoietic oligopotent progenitor cell | 2.64e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.64e-07 | 161 |
myeloid leukocyte | 3.10e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.42e-09 | 98 |
blood island | 2.42e-09 | 98 |
hemolymphoid system | 1.72e-07 | 108 |