FFCP PHASE1:Hg19::chr2:26151623..26151634,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr2:26151623..26151634,- to FFCP PHASE1:Hg19::chr2:26151623..26151634,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:26151623..26151634,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_at_chr2:26151623..26151634,- | |||
|id=chr2:26151623..26151634,- | |||
|ontology_enrichment_celltype=CL:0000047!6.29e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002581;2.47e-19;1!CL:0000047;2.37e-10;2!CL:0002615;2.55e-07;3!CL:0002567;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,2.71e-19,1;CL:0000047,5.29e-10,8;CL:0002567,2.32e-07,3;CL:0002615,3.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!6.70e-28!86;UBERON:0001017!1.72e-27!82;UBERON:0000073!1.10e-24!94;UBERON:0001016!1.10e-24!94;UBERON:0001049!9.56e-23!57;UBERON:0005068!9.56e-23!57;UBERON:0006241!9.56e-23!57;UBERON:0007135!9.56e-23!57;UBERON:0001869!8.39e-22!32;UBERON:0002020!1.10e-21!34;UBERON:0003528!1.10e-21!34;UBERON:0003075!7.02e-21!86;UBERON:0007284!7.02e-21!86;UBERON:0002619!1.11e-20!22;UBERON:0001950!1.17e-20!20;UBERON:0002346!2.32e-20!90;UBERON:0000955!2.52e-20!69;UBERON:0006238!2.52e-20!69;UBERON:0002616!3.76e-20!59;UBERON:0001893!4.99e-20!34;UBERON:0000956!2.04e-19!25;UBERON:0000203!2.04e-19!25;UBERON:0002791!5.32e-19!33;UBERON:0004121!3.07e-18!169;UBERON:0000924!4.07e-18!173;UBERON:0006601!4.07e-18!173;UBERON:0000033!1.21e-17!123;UBERON:0003056!1.35e-16!61;UBERON:0002780!1.37e-16!41;UBERON:0001890!1.37e-16!41;UBERON:0006240!1.37e-16!41;UBERON:0000153!4.86e-16!129;UBERON:0007811!4.86e-16!129;UBERON:0003080!5.44e-16!42;UBERON:0000064!5.96e-10!219;UBERON:0001871!5.64e-09!7;UBERON:0000200!6.79e-09!6;UBERON:0003076!4.83e-08!15;UBERON:0003057!4.83e-08!15;UBERON:0001872!6.41e-08!5;UBERON:0000475!2.57e-07!365;UBERON:0004733!5.80e-07!12;UBERON:0002028!5.80e-07!12;UBERON:0007277!5.80e-07!12;UBERON:0007023!7.14e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.69e-14;20!UBERON:0000200;3.88e-13;6!UBERON:0002619;5.83e-13;22!UBERON:0000956;1.66e-11;25!UBERON:0000203;1.66e-11;25!UBERON:0001871;2.13e-11;6!UBERON:0002771;1.43e-10;2!UBERON:0001876;2.37e-10;2!UBERON:0002702;2.37e-10;2!UBERON:0005406;2.37e-10;2!UBERON:0003528;6.12e-09;34!UBERON:0002020;6.12e-09;34!UBERON:0002791;1.53e-08;32!UBERON:0001869;1.53e-08;32!UBERON:0001893;1.99e-08;34!UBERON:0001870;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.85e-14,20;UBERON:0000200,3.34e-13,6;UBERON:0002619,4.62e-13,22;UBERON:0000956,1.35e-11,25;UBERON:0000203,1.35e-11,25;UBERON:0001871,1.68e-11,6;UBERON:0002771,1.43e-10,2;UBERON:0001876,1.57e-10,2;UBERON:0002702,1.89e-10,2;UBERON:0005406,2.49e-10,2;UBERON:0002791,3.35e-09,32;UBERON:0001869,3.35e-09,32;UBERON:0003528,1.08e-08,34;UBERON:0002020,1.08e-08,34;UBERON:0001893,1.08e-08,34;UBERON:0001017,9.57e-08,81;UBERON:0003056,2.08e-07,61;UBERON:0001870,2.19e-07,3;UBERON:0002780,2.75e-07,41;UBERON:0001890,2.75e-07,41;UBERON:0003080,2.75e-07,41;UBERON:0006240,2.75e-07,41;UBERON:0001016,5.78e-07,89 | |||
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| ||
|short_description=p@chr2:26151623..26151634,- | |||
}} | }} |
Latest revision as of 08:57, 29 July 2015
Short description: | p@chr2:26151623..26151634, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:26151623..26151634, - |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 2.71e-19 | 1 |
neuronal stem cell | 5.29e-10 | 8 |
light melanocyte | 2.32e-07 | 3 |
adipocyte of omentum tissue | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neocortex | 2.85e-14 | 20 |
gyrus | 3.34e-13 | 6 |
regional part of cerebral cortex | 4.62e-13 | 22 |
cerebral cortex | 1.35e-11 | 25 |
pallium | 1.35e-11 | 25 |
temporal lobe | 1.68e-11 | 6 |
middle temporal gyrus | 1.43e-10 | 2 |
amygdala | 1.57e-10 | 2 |
middle frontal gyrus | 1.89e-10 | 2 |
perirenal fat | 2.49e-10 | 2 |
regional part of telencephalon | 3.35e-09 | 32 |
cerebral hemisphere | 3.35e-09 | 32 |
brain grey matter | 1.08e-08 | 34 |
gray matter | 1.08e-08 | 34 |
telencephalon | 1.08e-08 | 34 |
central nervous system | 9.57e-08 | 81 |
pre-chordal neural plate | 2.08e-07 | 61 |
frontal cortex | 2.19e-07 | 3 |
regional part of forebrain | 2.75e-07 | 41 |
forebrain | 2.75e-07 | 41 |
anterior neural tube | 2.75e-07 | 41 |
future forebrain | 2.75e-07 | 41 |
nervous system | 5.78e-07 | 89 |