FFCP PHASE1:Hg19::chr2:66789201..66789212,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:66789201..66789212,+ to FFCP PHASE1:Hg19::chr2:66789201..66789212,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:66789201..66789212,+ | |||
|coexpression_cluster_id=C1912 | |||
|description=CAGE_peak_at_chr2:66789201..66789212,+ | |||
|id=chr2:66789201..66789212,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;6.25e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;7.72e-08;14!DOID:171;3.88e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.16e-08,14;DOID:171,4.00e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.52e-15!115;UBERON:0000924!6.60e-09!173;UBERON:0006601!6.60e-09!173;UBERON:0000475!1.07e-08!365;UBERON:0000955!1.68e-08!69;UBERON:0006238!1.68e-08!69;UBERON:0000073!1.77e-08!94;UBERON:0001016!1.77e-08!94;UBERON:0001049!2.14e-08!57;UBERON:0005068!2.14e-08!57;UBERON:0006241!2.14e-08!57;UBERON:0007135!2.14e-08!57;UBERON:0004121!6.79e-08!169;UBERON:0002346!8.53e-08!90;UBERON:0000062!1.17e-07!511;UBERON:0000033!1.33e-07!123;UBERON:0000153!1.78e-07!129;UBERON:0007811!1.78e-07!129;UBERON:0005156!4.12e-07!59;UBERON:0000990!4.12e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.33e-09;33!UBERON:0000160;2.97e-09;17!UBERON:0005409;1.46e-07;22!UBERON:0000059;2.96e-07;11!UBERON:0001044;3.01e-07;6!UBERON:0003293;3.01e-07;6!UBERON:0003294;3.01e-07;6!UBERON:0010047;3.01e-07;6!UBERON:0003408;3.01e-07;6!UBERON:0000167;3.01e-07;6!UBERON:0001155;3.95e-07;9!UBERON:0000013;6.25e-07;5!UBERON:0002410;6.25e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.06e-11,114;UBERON:0011216,6.04e-10,223;UBERON:0000160,1.88e-09,17;UBERON:0002346,2.64e-08,86;UBERON:0004121,8.98e-08,171;UBERON:0000924,8.98e-08,171;UBERON:0006601,8.98e-08,171;UBERON:0000059,1.84e-07,11;UBERON:0001155,2.33e-07,9;UBERON:0001044,2.35e-07,6;UBERON:0003293,2.35e-07,6;UBERON:0003294,2.35e-07,6;UBERON:0010047,2.35e-07,6;UBERON:0000167,2.35e-07,6;UBERON:0003075,3.75e-07,82;UBERON:0007284,3.75e-07,82;UBERON:0000013,6.43e-07,5;UBERON:0002410,6.43e-07,5 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.704772020479856,0,3.12872766099101,1.74467704820074,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,1.34465029290355,0.602694528023977,1.46062018077475,1.46379839637152,0.492484232307152,0,0.313454721478088,1.43117993565528,0.958120975510189,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,4.9912074686924,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,1.68152568894461,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,5.95569348133627,3.76939975686359,5.70926107005319,0.851363990735132,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0.24406205754817,0.367663080345869,0,1.25019619597712,0,0.112611480483322,0,0,0,0,0,0.872188104285069,0.496971951695318,0.886413581652058,4.237093786023,8.60509862246441,1.06400514659507,0,1.06748995729705,0,1.24484414159907,0.134710672069688,0.163461903113459,0,0,0,0,0,0.448346041655403,0.587172493218824,0.485618833104395,0.561803226808994,0.408308342509787,0,0.206651562351531,1.18800285728205,0,0,0,0.841680569770331,0.500474079487857,0,0,0.30648779579902,0,0.113432183160021,1.97328599257748,0.640672166455702,0.211931901159562,1.20036438433761,1.23663035086127,2.83404594050192,0.558350568994769,4.21940830603166,1.16924406193438,1.00973509697646,0.552299391853796,0.646584227275248,5.68015348026583,1.61203357164224,1.18692414617341,0.193260853163297,0.545492241181669,0.286804595389004,0,0.132529768321485,0.580969714347592,0.621966330092223,0,0,1.56449532329816,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,1.77236972004421,0,0.122988438543114,0.514703430895577,0,0,0,0.277765335475589,0,0,0,1.27523445472584,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0.288239906833923,0,0.190493682876507,0,0,0,0,0,0.285826432630578,0,0,0,1.16344544182,0,1.690605505112,2.6593811658487,2.08014873822732,0,1.41849132023278,0,3.71742783511184,0.542621605391443,0,0.325736184293735,2.13235169245527,0,2.71295439353627,0,2.69927076191554,0,0,0,0.479249710983165,0,0,0,0.410952645100767,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0.335032530668698,0,0.749007023947182,0,0,0.36807447515742,0,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0.184369168541703,3.21469373531907,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,1.68808170616869,0.280660094433074,0.640695746278505,0.511707249066704,1.44768529029247,0,0.616838775210622,0.177561725313127,0.164254312027618,0.519254429183621,0.581051892299796,0.120859449591622,0.200506470303285,0.460404944679482,1.14814448164607,3.09554985611419,4.98272776845812,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,1.75169719801128,0.366277859273374,0.41254749960294,0,0,1.6068392984416,0,0.308097234229289,0.614014698904518,0.137836572484531,1.82614416276065,0.580066775656914,0.170453254832202,0.178064071293475,0.165284915360978,0.192190067365106,1.53135254993501,0.30347334256665,0,2.51849877464512,0,0,0,0,0.37064843820784,1.14499909393593,0,0.316379424718726,2.47819252100972,0.255897791311334,0.855877976067841,0.318203247925937,0,6.1156635578327,8.5106479218177,4.47687128913608,0,0,0,0.48763373908959,1.46228093778771,0,1.9109987597118,3.67654123079653,1.13008116620243,0,0,0.438450885253763,0,1.9676842561399,0,0.6196469961995,0,0.860468113224309,0.0982490410131212,0,3.19284957663538,0.211107635297664,0.658589785919804,0,0,0.192444225451024,0,0,1.12972560932135,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,1.79621434289535,0.5745161103971,1.48171507906718,0.324621940274555,5.33514638415572,0,0,2.50634477090067,7.61813000107215,0,0,2.12923118845163,2.06103206853459,0,0,0,1.36771666781428,0.556812347790485,0,1.08182271390393,0,0,0,0.439524537815682,0.242721043499027,0.111443384277478,0.284136146806413,1.43246690842614,0.593929361665277,0.307160702099232,0,1.1253553312841,0.333926115068718,0.16480387422676,0,4.38345574152353,3.03912307084262,1.0077309914171,1.22722419002586,0.246169610922139,0.311039587661807,0,0.179021174675609,7.67358555340308,1.7755813014648,0,1.11136990144637,0.969332746095218,0.463840490809256,1.99613798001194,0,1.22443999994674,0,0.910347586283997,0.508507300585533,0.236387681767936,1.37897349296586,5.54048765428183,2.2571249341328,1.77148277162768,1.08536794762867,3.05163472634166,8.95692005442919,4.43321428430321,0.438770794307945,0.21787692703798,3.06732237412927,12.9276434286379,0,1.38338342632836,0.628303510868405,0.217294743844016,0.638002319463839,0.732780747214898,0.5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| ||
|short_description=p@chr2:66789201..66789212,+ | |||
}} | }} |
Latest revision as of 11:33, 29 July 2015
Short description: | p@chr2:66789201..66789212, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:66789201..66789212, + |
Coexpression cluster: | C1912_uterus_cervix_rectum_cerebellum_neuroepithelioma_sacrococcigeal_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.06e-11 | 114 |
organ system subdivision | 6.04e-10 | 223 |
intestine | 1.88e-09 | 17 |
neurectoderm | 2.64e-08 | 86 |
ectoderm-derived structure | 8.98e-08 | 171 |
ectoderm | 8.98e-08 | 171 |
presumptive ectoderm | 8.98e-08 | 171 |
large intestine | 1.84e-07 | 11 |
colon | 2.33e-07 | 9 |
saliva-secreting gland | 2.35e-07 | 6 |
gland of oral region | 2.35e-07 | 6 |
gland of foregut | 2.35e-07 | 6 |
oral gland | 2.35e-07 | 6 |
oral cavity | 2.35e-07 | 6 |
neural plate | 3.75e-07 | 82 |
presumptive neural plate | 3.75e-07 | 82 |
sympathetic nervous system | 6.43e-07 | 5 |
autonomic nervous system | 6.43e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.16e-08 | 14 |
neuroectodermal tumor | 4.00e-07 | 10 |