FFCP PHASE1:Hg19::chr2:76806798..76806811,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:76806798..76806811,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr2:76806798..76806811,+ | |||
|id=chr2:76806798..76806811,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.15e-71!5;CL:0000039!3.57e-32!7;CL:0000586!3.57e-32!7;CL:0000540!4.68e-22!6;CL:0000031!4.68e-22!6;CL:0000404!4.68e-22!6;CL:0000047!1.02e-16!8;CL:0002127!3.66e-15!1;CL:0000914!3.66e-15!1;CL:0000911!3.66e-15!1;CL:0000814!3.66e-15!1;CL:0002042!3.66e-15!1;CL:0002039!3.66e-15!1;CL:0002040!3.66e-15!1;CL:0002041!3.66e-15!1;CL:0000148!1.19e-13!10;CL:0000541!1.19e-13!10;CL:0000147!6.43e-10!14;CL:0000893!3.08e-08!2;CL:0002489!3.08e-08!2;CL:0000809!3.08e-08!2;CL:0000808!3.08e-08!2;CL:0000894!3.08e-08!2;CL:0000806!3.08e-08!2;CL:0000807!3.08e-08!2;CL:0000805!3.08e-08!2;CL:0002425!3.08e-08!2;CL:0000133!3.22e-08!59;CL:0000710!4.25e-07!20;CL:0000221!8.22e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.23e-83;5!CL:0002321;6.55e-28;15!CL:0000540;1.89e-25;6!CL:0000404;1.89e-25;6!CL:0000039;1.65e-21;7!CL:0000586;1.65e-21;7!CL:0000148;9.33e-16;10!CL:0000147;1.94e-11;14!CL:0000710;3.54e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.61e-83,5;CL:0000540,1.81e-25,6;CL:0000031,1.81e-25,6;CL:0000404,1.81e-25,6;CL:0000039,1.54e-21,7;CL:0000586,1.54e-21,7;CL:0000047,2.73e-19,8;CL:0000148,9.56e-16,10;CL:0000541,9.56e-16,10;CL:0000147,1.98e-11,14;CL:0000133,1.15e-09,59;CL:0000710,3.58e-08,20;CL:0000221,6.34e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.89e-25;6!UBERON:0009117;2.85e-15;10!UBERON:0005564;2.85e-15;10 | |||
|ontology_enrichment_disease=DOID:3095!6.30e-16!22;DOID:2994!6.30e-16!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.48e-12;22!DOID:2994;3.48e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.48e-12,22;DOID:2994,3.48e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.26e-28!8;UBERON:0003135!1.23e-20!11;UBERON:0000991!5.70e-11!21;UBERON:0009196!5.70e-11!21;UBERON:0009117!5.70e-11!21;UBERON:0005564!5.70e-11!21;UBERON:0004176!1.75e-10!22;UBERON:0003101!1.75e-10!22;UBERON:0000079!1.75e-10!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.51e-19;8!UBERON:0003135;6.04e-14;11!UBERON:0000922;3.20e-13;49!UBERON:0000991;1.37e-07;21!UBERON:0003101;2.88e-07;22!UBERON:0000079;2.88e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.12e-19,8;UBERON:0003135,5.78e-14,11;UBERON:0000991,1.34e-07,21;UBERON:0009196,1.34e-07,21;UBERON:0009117,1.34e-07,21;UBERON:0005564,1.34e-07,21;UBERON:0004176,2.81e-07,22;UBERON:0003101,2.81e-07,22;UBERON:0000079,2.81e-07,22 | |||
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|short_description=p@chr2:76806798..76806811,+ | |||
}} | }} |
Latest revision as of 12:27, 29 July 2015
Short description: | p@chr2:76806798..76806811, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:76806798..76806811, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.61e-83 | 5 |
neuron | 1.81e-25 | 6 |
neuroblast | 1.81e-25 | 6 |
electrically signaling cell | 1.81e-25 | 6 |
germ line cell | 1.54e-21 | 7 |
germ cell | 1.54e-21 | 7 |
neuronal stem cell | 2.73e-19 | 8 |
melanocyte | 9.56e-16 | 10 |
melanoblast | 9.56e-16 | 10 |
pigment cell | 1.98e-11 | 14 |
neurectodermal cell | 1.15e-09 | 59 |
neurecto-epithelial cell | 3.58e-08 | 20 |
ectodermal cell | 6.34e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 6.12e-19 | 8 |
male reproductive organ | 5.78e-14 | 11 |
gonad | 1.34e-07 | 21 |
indifferent external genitalia | 1.34e-07 | 21 |
indifferent gonad | 1.34e-07 | 21 |
gonad primordium | 1.34e-07 | 21 |
external genitalia | 2.81e-07 | 22 |
male organism | 2.81e-07 | 22 |
male reproductive system | 2.81e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.48e-12 | 22 |
germ cell cancer | 3.48e-12 | 22 |