FFCP PHASE1:Hg19::chr3:121553830..121553928,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:121553830..121553928,- to FFCP PHASE1:Hg19::chr3:121553830..121553928,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9657 | |EntrezGene=9657 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28949 | |HGNC=28949 | ||
|TSSclassifier=strong | |||
|UniProt=Q15051,C9JXD7,C9JVC4,C9J6Z7,Q3KS08 | |UniProt=Q15051,C9JXD7,C9JVC4,C9J6Z7,Q3KS08 | ||
|association_with_transcript=0bp_to_ENST00000310864,ENST00000349820,ENST00000393650,ENST00000460108,ENST00000462442,ENST00000471726,ENST00000498104,NM_001023570,NM_001023571,uc003eek.2,uc010hre.1,uc010hrf.1_5end | |||
|cluster_id=chr3:121553830..121553928,- | |||
|description=CAGE_peak_1_at_IQCB1_5end | |||
|id=chr3:121553830..121553928,- | |||
|ontology_enrichment_celltype=CL:0000542!2.52e-20!53;CL:0000051!2.52e-20!53;CL:0000838!8.78e-20!52;CL:0000945!6.17e-14!24;CL:0000826!6.17e-14!24;CL:0000037!7.41e-10!172;CL:0000566!7.41e-10!172;CL:0000988!2.70e-09!182;CL:0000236!4.76e-09!14;CL:0002032!1.44e-08!165;CL:0000837!1.44e-08!165;CL:0000084!6.53e-07!25;CL:0000827!6.53e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.71e-14;24!CL:0000542;3.50e-12;53!CL:0000236;1.81e-08;13!CL:0000084;7.86e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.52e-20,53;CL:0000051,2.52e-20,53;CL:0000838,8.78e-20,52;CL:0000945,6.17e-14,24;CL:0000826,6.17e-14,24;CL:0000037,1.27e-10,168;CL:0000988,4.14e-10,177;CL:0002032,2.79e-09,161;CL:0000837,2.79e-09,161;CL:0000236,4.76e-09,14;CL:0000084,6.53e-07,25;CL:0000827,6.53e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;3.50e-12;53 | |||
|ontology_enrichment_disease=DOID:162!2.54e-29!235;DOID:14566!4.75e-28!239;DOID:0050686!3.18e-18!137;DOID:2531!7.32e-18!51;DOID:0060083!7.32e-18!51;DOID:0050687!2.50e-15!143;DOID:1240!6.61e-14!39;DOID:8692!7.14e-12!31;DOID:305!1.34e-11!106;DOID:3095!5.44e-07!22;DOID:2994!5.44e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.83e-11;31!DOID:1240;5.97e-11;39!DOID:2531;6.19e-11;51!DOID:0060083;6.19e-11;51!DOID:3095;5.43e-07;22!DOID:2994;5.43e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.54e-29,235;DOID:14566,4.75e-28,239;DOID:0050686,3.18e-18,137;DOID:2531,7.32e-18,51;DOID:0060083,7.32e-18,51;DOID:0050687,2.50e-15,143;DOID:1240,6.61e-14,39;DOID:8692,7.14e-12,31;DOID:305,1.34e-11,106;DOID:3095,5.44e-07,22;DOID:2994,5.44e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.01e-07;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
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684304392 | ||
|short_description=p1@IQCB1 | |||
}} | }} |
Latest revision as of 23:00, 19 September 2015
Short description: | p1@IQCB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IQCB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000310864, ENST00000349820, ENST00000393650, ENST00000460108, ENST00000462442, ENST00000471726, ENST00000498104, NM_001023570, NM_001023571, uc003eek.2, uc010hre.1, uc010hrf.1_5end |
EntrezGene: | IQCB1 |
HGNC: | 28949 |
UniProt: | Q15051C9JXD7C9JVC4C9J6Z7Q3KS08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.52e-20 | 53 |
common lymphoid progenitor | 2.52e-20 | 53 |
lymphoid lineage restricted progenitor cell | 8.78e-20 | 52 |
lymphocyte of B lineage | 6.17e-14 | 24 |
pro-B cell | 6.17e-14 | 24 |
hematopoietic stem cell | 1.27e-10 | 168 |
hematopoietic cell | 4.14e-10 | 177 |
hematopoietic oligopotent progenitor cell | 2.79e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.79e-09 | 161 |
B cell | 4.76e-09 | 14 |
T cell | 6.53e-07 | 25 |
pro-T cell | 6.53e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.54e-29 | 235 |
disease of cellular proliferation | 4.75e-28 | 239 |
organ system cancer | 3.18e-18 | 137 |
hematologic cancer | 7.32e-18 | 51 |
immune system cancer | 7.32e-18 | 51 |
cell type cancer | 2.50e-15 | 143 |
leukemia | 6.61e-14 | 39 |
myeloid leukemia | 7.14e-12 | 31 |
carcinoma | 1.34e-11 | 106 |
germ cell and embryonal cancer | 5.44e-07 | 22 |
germ cell cancer | 5.44e-07 | 22 |