FFCP PHASE1:Hg19::chr4:23965384..23965388,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:23965384..23965388,+ to FFCP PHASE1:Hg19::chr4:23965384..23965388,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:23965384..23965388,+ | |||
|coexpression_cluster_id=C2512 | |||
|description=CAGE_peak_at_chr4:23965384..23965388,+ | |||
|id=chr4:23965384..23965388,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.32e-08!42;CL:0000860!2.41e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.97e-19;1!CL:0002625;2.97e-19;1!CL:0000216;2.97e-19;1!CL:0002591;2.97e-19;1!CL:0002539;4.59e-17;10!CL:0000359;1.22e-09;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.56e-19,1;CL:0002625,1.56e-19,1;CL:0000216,1.56e-19,1;CL:0002591,3.25e-19,1;CL:0002539,4.47e-17,10;CL:0000359,1.97e-09,32;CL:0000192,4.36e-07,43;CL:0000514,4.36e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.97e-19;1!UBERON:0001343;2.97e-19;1!UBERON:0004910;2.97e-19;1!UBERON:0004813;2.97e-19;1!UBERON:0004237;4.59e-17;10!UBERON:0004695;4.59e-17;10!UBERON:0002111;4.59e-17;10!UBERON:0004178;4.59e-17;10!UBERON:0001135;1.34e-11;15!UBERON:0001954;2.60e-10;2!UBERON:0000078;2.60e-10;2!UBERON:0003022;2.60e-10;2!UBERON:0004909;2.60e-10;2!UBERON:0002012;2.60e-10;2!UBERON:0002421;2.60e-10;2!UBERON:0002600;2.60e-10;2!UBERON:0008886;2.60e-10;2!UBERON:0000947;1.87e-08;21!UBERON:0010191;1.87e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.56e-19,1;UBERON:0001343,1.56e-19,1;UBERON:0004910,1.56e-19,1;UBERON:0005154,1.56e-19,1;UBERON:0005295,1.56e-19,1;UBERON:0004813,1.56e-19,1;UBERON:0005297,1.56e-19,1;UBERON:0005294,1.56e-19,1;UBERON:0010141,1.56e-19,1;UBERON:0005891,1.56e-19,1;UBERON:0004237,4.47e-17,10;UBERON:0004695,4.47e-17,10;UBERON:0002111,4.47e-17,10;UBERON:0004178,4.47e-17,10;UBERON:0001135,1.32e-11,15;UBERON:0004909,1.89e-10,2;UBERON:0001954,2.07e-10,2;UBERON:0003022,2.07e-10,2;UBERON:0002421,2.07e-10,2;UBERON:0002600,2.07e-10,2;UBERON:0000078,2.72e-10,2;UBERON:0007497,2.72e-10,2;UBERON:0003643,2.72e-10,2;UBERON:0003504,2.72e-10,2;UBERON:0003469,2.72e-10,2;UBERON:0003496,2.72e-10,2;UBERON:0002012,2.72e-10,2;UBERON:0008886,2.72e-10,2;UBERON:0007303,2.72e-10,2;UBERON:0002061,2.72e-10,2;UBERON:0005432,2.72e-10,2;UBERON:0004363,2.72e-10,2;UBERON:0000947,1.85e-08,21;UBERON:0010191,1.85e-08,21;UBERON:0004872,1.05e-07,83;UBERON:0004145,2.79e-07,3;UBERON:0001637,2.99e-07,42;UBERON:0003509,2.99e-07,42;UBERON:0004572,2.99e-07,42 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,8.0679017574213,1.20538905604795,5.11217063271161,0.487932798790507,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0.28769239232215,1.0246428261164,0,0.344745680736619,0,4.06279459783025,0.376484679085209,0.272906150057846,0,0,0.320929027076094,0,0,0.398927315243264,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0.285012743741249,0.39783335439818,0,0,0,0,0.426730222566507,0.800791974072025,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0,0,0,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0.68725489096526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0,1.06748995729705,0,0,0,0,0.151357427644931,0,0.468642863667593,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0.404493924480493,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0.462985512576611,0.380508304469197,0.790204397959275,0.858486162094873,0.246217006087397,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.190493682876507,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.482561763430822,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0.290033387828457,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,1.13008116620243,0.551365343546124,0.66343897524122,0,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0.34945333648406,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0.137539436597234,0,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0.468334905806882,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0.363697318405119,0,0.928067519756987,0.398095888698616,0,0,0.336749488765919,0,0.192619830407303,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0.80057074828547,0,0,0,1.41696576325585,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0,0.781078098613847,0,0.126831620387814,0,0.548257766857182,0,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0.171488009437418,0,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,8.0679017574213,1.20538905604795,5.11217063271161,0.487932798790507,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0.28769239232215,1.0246428261164,0,0.344745680736619,0,4.06279459783025,0.376484679085209,0.272906150057846,0,0,0.320929027076094,0,0,0.398927315243264,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0.285012743741249,0.39783335439818,0,0,0,0,0.426730222566507,0.800791974072025,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0,0,0,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0.68725489096526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0,1.06748995729705,0,0,0,0,0.151357427644931,0,0.468642863667593,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0.404493924480493,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0.462985512576611,0.380508304469197,0.790204397959275,0.858486162094873,0.246217006087397,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.190493682876507,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.482561763430822,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0.290033387828457,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,1.13008116620243,0.551365343546124,0.66343897524122,0,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0.34945333648406,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0.137539436597234,0,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0.468334905806882,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0.363697318405119,0,0.928067519756987,0.398095888698616,0,0,0.336749488765919,0,0.192619830407303,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0.80057074828547,0,0,0,1.41696576325585,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0,0.781078098613847,0,0.126831620387814,0,0.548257766857182,0,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0.171488009437418,0,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:23965384..23965388,+ | |||
}} | }} |
Latest revision as of 04:27, 30 July 2015
Short description: | p@chr4:23965384..23965388, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:23965384..23965388, + |
Coexpression cluster: | C2512_Aortic_CD14_Fibroblast_Smooth_extraskeletal_tridermal_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.56e-19 | 1 |
seminiferous tubule epithelial cell | 1.56e-19 | 1 |
Sertoli cell | 1.56e-19 | 1 |
smooth muscle cell of the pulmonary artery | 3.25e-19 | 1 |
aortic smooth muscle cell | 4.47e-17 | 10 |
vascular associated smooth muscle cell | 1.97e-09 | 32 |
smooth muscle cell | 4.36e-07 | 43 |
smooth muscle myoblast | 4.36e-07 | 43 |