FFCP PHASE1:Hg19::chr4:41937307..41937318,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:41937307..41937318,+ to FFCP PHASE1:Hg19::chr4:41937307..41937318,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55161 | |EntrezGene=55161 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25541 | |HGNC=25541 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-82bp_to_ENST00000510383_5end | |||
|cluster_id=chr4:41937307..41937318,+ | |||
|description=CAGE_peak_4_at_TMEM33_5end | |||
|id=chr4:41937307..41937318,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.16e-21!254;CL:0000223!1.36e-17!59;CL:0002076!1.09e-11!43;CL:0002251!4.73e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.76e-15;12!CL:0002322;2.96e-11;5!CL:0002563;1.09e-08;4!CL:0000039;1.38e-08;7!CL:0000586;1.38e-08;7!CL:0002253;2.36e-08;2!CL:0002251;6.56e-08;20!CL:0002321;1.05e-07;15!CL:0002076;5.91e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.39e-20,58;CL:0000182,4.24e-15,12;CL:0000066,2.38e-12,253;CL:0002322,4.15e-11,5;CL:0002563,8.74e-09,4;CL:0000039,1.16e-08,7;CL:0000586,1.16e-08,7;CL:0002253,1.67e-08,2;CL:0002076,5.19e-08,42;CL:0002251,7.68e-08,20 | |||
|ontology_enrichment_development_v019=CL:0000223;2.47e-12;58!UBERON:0009497;5.83e-10;13!UBERON:0004161;1.35e-08;11!UBERON:0001041;1.93e-08;30!UBERON:0003104;2.43e-08;31 | |||
|ontology_enrichment_disease=DOID:305!1.83e-27!106;DOID:0050687!3.93e-27!143;DOID:162!5.93e-26!235;DOID:14566!2.00e-25!239;DOID:1749!1.72e-07!14;DOID:0050686!4.39e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:3493;9.69e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.27e-12,106;DOID:0050687,8.25e-12,143;DOID:3493,1.20e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.74e-11!169;UBERON:0000925!5.74e-11!169;UBERON:0006595!5.74e-11!169;UBERON:0001007!1.65e-08!155;UBERON:0001555!1.65e-08!155;UBERON:0007026!1.65e-08!155;UBERON:0000077!2.82e-08!130;UBERON:0004921!1.12e-07!129;UBERON:0004185!1.12e-07!129;UBERON:0005911!1.13e-07!82;UBERON:0001041!2.89e-07!98;UBERON:0001004!3.38e-07!72;UBERON:0000344!7.17e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.05e-12;19!UBERON:0006925;7.05e-12;19!UBERON:0002423;7.80e-11;25!UBERON:0001242;1.09e-08;4!UBERON:0001262;1.09e-08;4!UBERON:0004786;1.09e-08;4!UBERON:0004808;1.09e-08;4!UBERON:0001277;1.09e-08;4!UBERON:0002365;2.27e-08;31!UBERON:0002330;2.27e-08;31!UBERON:0003929;2.52e-08;7!UBERON:0003350;2.75e-07;8!UBERON:0000949;9.75e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007499,2.18e-13,25;UBERON:0009856,8.61e-13,26;UBERON:0008835,1.30e-12,22;UBERON:0003894,1.30e-12,22;UBERON:0009854,5.50e-12,23;UBERON:0002107,6.51e-12,19;UBERON:0006925,6.51e-12,19;UBERON:0008836,6.51e-12,19;UBERON:0009497,6.96e-11,25;UBERON:0000015,6.96e-11,25;UBERON:0002423,6.96e-11,25;UBERON:0006235,6.96e-11,25;UBERON:0004161,6.96e-11,25;UBERON:0003929,2.18e-10,54;UBERON:0005911,2.49e-10,82;UBERON:0001242,8.74e-09,4;UBERON:0001262,8.74e-09,4;UBERON:0004786,8.74e-09,4;UBERON:0004808,8.74e-09,4;UBERON:0001277,8.74e-09,4;UBERON:0002365,2.02e-08,31;UBERON:0002330,2.02e-08,31;UBERON:0003350,3.04e-07,8;UBERON:0004921,9.65e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,0,1.10799081706375,0,0,0,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.398927315243264,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0.628975936525128,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,1.52054421143703,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0.560677600142307,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0.386521706326594,1.09098448236334,0.860413786167011,0.853815942907168,1.45782745153634,1.16193942869518,1.34759371519982,1.26160425437814,2.55484151353081,0,0,0,0,0,0.354920400119532,0.168584690078102,0.723033089650446,0.220587945464788,0.435758888184812,0.237270619111097,0.539325232640658,0.196221465125346,0,0,0,0,0,5.07020139287323,16.7080626835196,4.72631925345123,0.441463099414651,1.35287282397425,0,0.109750285408626,0,0.402115889646523,0.0925884451585296,0,0,1.44331342025273,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0.503946384596579,0.425325291727159,0.447792613514241,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0.112085143993527,0,0.431255149719035,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.606255142892519,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,2.77976734060731,0,0.0920809889358963,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0.764628819135115,0,0,0,0,0,0,0,0.9273691048295,0,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0,0.255679882248303,0,0.495854746082934,1.15314040419064,0.510450849978337,0.4046311234222,0,0,0,0,0,0,0,0.429374660225974,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.941438007767792,0.43050537267123,1.68471475667626,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,0.427296284509893,0,0.490080431962063,0,0,0.142283686696828,0.637705090915289,0.199579371432817,0,0,0,0,0,0.313359791546046,0,0.169291777801603,0.1605880751037,0,0.851692475380653,0,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,1.49712432326576,0,0.242721043499027,0.111443384277478,0,0.47748896947538,0,0,0,0,0,0.329607748453519,0.63337622438398,0.19924798825107,0,1.25966373927138,0.306806047506464,0,0.311039587661807,0.539210106883961,1.43216939740487,0,0,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0.455173793141999,1.5255219017566,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0,0.21787692703798,0.41827123283581,0.0769502585037971,0,13.3727064545075,1.79515288819544,2.7161842980502,2.23300811812344,0.457987967009312,1.06606955203727,1.02193298195737,0.31396051279005,0,0.451191321234361,0.19606253431774,0.335643173951685,0.189753732724185,0,0,0,3.95788600015034,1.51472047819464,0,0.265372693510018,0,0,0.123563938946503,0,0,0,0.702793337176017,0.182454789215666,1.76098157038881,0.485560759068186,0,0,0,0.063186579628488,2.70582154946087,0.207376382794494,0,0,0,0,1.42304773014896,0.138674673013139,0.694238953340524,0.391969589657511,0.261177619741208,0,0,2.32215195093804,0.950161122120412,1.39596276990456,0,0,0,0.274083849293502,0.19871461170299,0,0.391102765469606,0.160317640503067,0.213452994739353,0.599428828746391,0.432271251462318,0.114536596165916,0,0.720273989940749,0.124252535565433,0.235694034616795,0.135904206073614,0.209205692624666,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,6.98975697164723,2.6786281984456,2.63730746819733,2.62873821031321,0.984274815147488,0.677386656526276,0.795229689809303,0,1.60753148465019,1.92555211236127,0.415440338029185,0.449947783103001,0,0,0,0.394028536495991,0,0.422401346077626,0,0.959575986597226,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0.340776043570843,0.113312091520126,10.8448652921781,0,0.129282956361551,0.13223260174269,0.342173675768659,0.704815022316672,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0.628216385000937,0,0,0.1251909307065,0.573409195690071,0,0.124192805882767,0.138348634936231,0.74988244777264,0.151649117541648,0,0.235265819698172,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0.400027764663154,0,0,1.26184898228651,0,0.428883182749851,0.5219885839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| ||
|short_description=p4@TMEM33 | |||
}} | }} |
Latest revision as of 20:02, 17 September 2015
Short description: | p4@TMEM33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMEM33_5end |
Coexpression cluster: | NA |
Association with transcript: | -82bp_to_ENST00000510383_5end |
EntrezGene: | TMEM33 |
HGNC: | 25541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.39e-20 | 58 |
hepatocyte | 4.24e-15 | 12 |
epithelial cell | 2.38e-12 | 253 |
embryonic stem cell | 4.15e-11 | 5 |
intestinal epithelial cell | 8.74e-09 | 4 |
germ line cell | 1.16e-08 | 7 |
germ cell | 1.16e-08 | 7 |
epithelial cell of large intestine | 1.67e-08 | 2 |
endo-epithelial cell | 5.19e-08 | 42 |
epithelial cell of alimentary canal | 7.68e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelial sac | 2.18e-13 | 25 |
sac | 8.61e-13 | 26 |
hepatic diverticulum | 1.30e-12 | 22 |
liver primordium | 1.30e-12 | 22 |
digestive tract diverticulum | 5.50e-12 | 23 |
liver | 6.51e-12 | 19 |
digestive gland | 6.51e-12 | 19 |
liver bud | 6.51e-12 | 19 |
epithelium of foregut-midgut junction | 6.96e-11 | 25 |
anatomical boundary | 6.96e-11 | 25 |
hepatobiliary system | 6.96e-11 | 25 |
foregut-midgut junction | 6.96e-11 | 25 |
septum transversum | 6.96e-11 | 25 |
gut epithelium | 2.18e-10 | 54 |
endo-epithelium | 2.49e-10 | 82 |
intestinal mucosa | 8.74e-09 | 4 |
wall of intestine | 8.74e-09 | 4 |
gastrointestinal system mucosa | 8.74e-09 | 4 |
gastrointestinal system epithelium | 8.74e-09 | 4 |
intestinal epithelium | 8.74e-09 | 4 |
exocrine gland | 2.02e-08 | 31 |
exocrine system | 2.02e-08 | 31 |
epithelium of mucosa | 3.04e-07 | 8 |
subdivision of digestive tract | 9.65e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.27e-12 | 106 |
cell type cancer | 8.25e-12 | 143 |
signet ring cell adenocarcinoma | 1.20e-08 | 2 |