FFCP PHASE1:Hg19::chr5:68665296..68665381,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:68665296..68665381,- to FFCP PHASE1:Hg19::chr5:68665296..68665381,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6880 | |EntrezGene=6880 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11542 | |HGNC=11542 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y3D8,D6RIE8,D6RIY1,D6RDH4 | |UniProt=Q9Y3D8,D6RIE8,D6RIY1,D6RDH4 | ||
|association_with_transcript=0bp_to_ENST00000380822,ENST00000502819,ENST00000503245,ENST00000512152,ENST00000512561_5end | |||
|cluster_id=chr5:68665296..68665381,- | |||
|description=CAGE_peak_1_at_TAF9_5end | |||
|id=chr5:68665296..68665381,- | |||
|ontology_enrichment_celltype=CL:0000012!2.26e-29!682;CL:0000548!1.25e-27!679;CL:0000004!1.25e-27!679;CL:0000255!1.25e-27!679;CL:0000003!1.07e-18!722;CL:0000144!1.07e-17!625;CL:0000063!4.77e-16!578;CL:0000034!2.02e-14!444;CL:0000723!4.71e-13!436;CL:0000048!4.98e-13!430;CL:0002371!3.00e-12!591;CL:0000219!2.85e-11!390;CL:0000134!5.93e-11!358;CL:0002320!1.96e-10!365 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,6.07e-14,441;CL:0000723,1.33e-12,433;CL:0000048,1.40e-12,427;CL:0000219,1.18e-10,386;CL:0000134,2.37e-10,354;CL:0002320,7.58e-10,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.53e-27!239;DOID:162!2.79e-25!235;DOID:0050686!1.59e-14!137;DOID:2531!3.27e-12!51;DOID:0060083!3.27e-12!51;DOID:0050687!2.67e-10!143;DOID:1240!1.41e-09!39;DOID:305!6.91e-09!106;DOID:8692!2.60e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.00e-08;39!DOID:8692;3.41e-08;31!DOID:2531;1.39e-07;51!DOID:0060083;1.39e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.53e-27,239;DOID:162,2.79e-25,235;DOID:0050686,1.59e-14,137;DOID:2531,3.27e-12,51;DOID:0060083,3.27e-12,51;DOID:0050687,2.67e-10,143;DOID:1240,1.41e-09,39;DOID:305,6.91e-09,106;DOID:8692,2.60e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.58e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.85e-10,371 | |||
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| ||
|short_description=p1@TAF9 | |||
}} | }} |
Latest revision as of 12:59, 18 September 2015
Short description: | p1@TAF9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TAF9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000380822, ENST00000502819, ENST00000503245, ENST00000512152, ENST00000512561_5end |
EntrezGene: | TAF9 |
HGNC: | 11542 |
UniProt: | Q9Y3D8D6RIE8D6RIY1D6RDH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 6.07e-14 | 441 |
somatic stem cell | 1.33e-12 | 433 |
multi fate stem cell | 1.40e-12 | 427 |
motile cell | 1.18e-10 | 386 |
mesenchymal cell | 2.37e-10 | 354 |
connective tissue cell | 7.58e-10 | 361 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.85e-10 | 371 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.53e-27 | 239 |
cancer | 2.79e-25 | 235 |
organ system cancer | 1.59e-14 | 137 |
hematologic cancer | 3.27e-12 | 51 |
immune system cancer | 3.27e-12 | 51 |
cell type cancer | 2.67e-10 | 143 |
leukemia | 1.41e-09 | 39 |
carcinoma | 6.91e-09 | 106 |
myeloid leukemia | 2.60e-08 | 31 |