FFCP PHASE1:Hg19::chr6:73934008..73934023,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:73934008..73934023,- | |||
|coexpression_cluster_id=C196 | |||
|description=CAGE_peak_at_chr6:73934008..73934023,- | |||
|id=chr6:73934008..73934023,- | |||
|ontology_enrichment_celltype=CL:0000039!4.64e-13!7;CL:0000586!4.64e-13!7;CL:1000415!2.48e-11!2;CL:0002166!4.89e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.23e-29;7!CL:0000586;4.23e-29;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.50e-29,7;CL:0000586,3.50e-29,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.28e-20;10!UBERON:0005564;1.28e-20;10!UBERON:0010122;2.90e-12;2 | |||
|ontology_enrichment_disease=DOID:1749!3.27e-18!14;DOID:305!2.77e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.24e-25;14!DOID:3095;9.40e-10;22!DOID:2994;9.40e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.39e-25,14;DOID:305,4.53e-10,106;DOID:3095,8.86e-10,22;DOID:2994,8.86e-10,22;DOID:0050687,2.08e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000369!4.80e-13!4;UBERON:0002435!4.80e-13!4;UBERON:0000204!4.80e-13!4;UBERON:0010082!4.80e-13!4;UBERON:0003343!1.16e-12!4;UBERON:0004785!1.16e-12!4;UBERON:0000473!1.94e-11!8;UBERON:0003729!3.17e-10!5;UBERON:0002420!8.43e-10!9;UBERON:0007245!8.43e-10!9;UBERON:0010009!8.43e-10!9;UBERON:0010011!8.43e-10!9;UBERON:0000454!8.43e-10!9;UBERON:0005383!1.66e-08!3;UBERON:0005382!1.66e-08!3;UBERON:0003135!2.48e-08!11;UBERON:0002110!7.72e-08!3;UBERON:0006242!7.72e-08!3;UBERON:0009663!1.21e-07!7;UBERON:0001874!4.58e-07!1;UBERON:0000997!6.43e-07!1;UBERON:0005056!6.43e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;3.10e-30;3!UBERON:0005382;3.10e-30;3!UBERON:0000473;1.44e-25;8!UBERON:0001874;1.67e-23;1!UBERON:0000997;4.10e-23;1!UBERON:0005056;4.10e-23;1!UBERON:0004176;4.10e-23;1!UBERON:0000369;5.75e-23;4!UBERON:0002435;5.75e-23;4!UBERON:0000204;5.75e-23;4!UBERON:0003135;8.15e-19;11!UBERON:0009663;1.40e-13;7!UBERON:0001873;2.90e-12;2!UBERON:0002420;8.79e-11;9!UBERON:0000125;8.79e-11;9!UBERON:0007245;8.79e-11;9!UBERON:0002308;8.79e-11;9!UBERON:0010009;8.79e-11;9!UBERON:0010011;8.79e-11;9!UBERON:0000454;8.79e-11;9!UBERON:0000991;3.46e-10;21!UBERON:0003101;9.40e-10;22!UBERON:0000079;9.40e-10;22!UBERON:0003133;7.97e-07;44!UBERON:0003343;9.10e-07;4!UBERON:0004785;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,3.59e-30,3;UBERON:0005382,3.59e-30,3;UBERON:0000473,1.22e-25,8;UBERON:0001874,1.67e-23,1;UBERON:0000997,6.40e-23,1;UBERON:0005056,6.40e-23,1;UBERON:0000369,6.42e-23,4;UBERON:0002435,6.42e-23,4;UBERON:0000204,6.42e-23,4;UBERON:0010082,6.42e-23,4;UBERON:0003135,7.22e-19,11;UBERON:0004176,1.77e-16,22;UBERON:0009663,1.49e-13,7;UBERON:0001873,3.24e-12,2;UBERON:0010122,3.24e-12,2;UBERON:0002420,9.23e-11,9;UBERON:0000125,9.23e-11,9;UBERON:0007245,9.23e-11,9;UBERON:0002308,9.23e-11,9;UBERON:0010009,9.23e-11,9;UBERON:0010011,9.23e-11,9;UBERON:0000454,9.23e-11,9;UBERON:0000991,3.25e-10,21;UBERON:0009196,3.25e-10,21;UBERON:0009117,3.25e-10,21;UBERON:0005564,3.25e-10,21;UBERON:0003101,8.86e-10,22;UBERON:0000079,8.86e-10,22;UBERON:0003133,9.21e-08,48;UBERON:0003343,8.61e-07,4;UBERON:0004785,8.61e-07,4 | |||
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|short_description=p@chr6:73934008..73934023,- | |||
}} | }} |
Latest revision as of 03:04, 31 July 2015
Short description: | p@chr6:73934008..73934023, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:73934008..73934023, - |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.50e-29 | 7 |
germ cell | 3.50e-29 | 7 |
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 3.59e-30 | 3 |
dorsal striatum | 3.59e-30 | 3 |
testis | 1.22e-25 | 8 |
putamen | 1.67e-23 | 1 |
mammalian vulva | 6.40e-23 | 1 |
external female genitalia | 6.40e-23 | 1 |
corpus striatum | 6.42e-23 | 4 |
striatum | 6.42e-23 | 4 |
ventral part of telencephalon | 6.42e-23 | 4 |
future corpus striatum | 6.42e-23 | 4 |
male reproductive organ | 7.22e-19 | 11 |
external genitalia | 1.77e-16 | 22 |
telencephalic nucleus | 1.49e-13 | 7 |
caudate nucleus | 3.24e-12 | 2 |
future caudate nucleus | 3.24e-12 | 2 |
basal ganglion | 9.23e-11 | 9 |
neural nucleus | 9.23e-11 | 9 |
nuclear complex of neuraxis | 9.23e-11 | 9 |
nucleus of brain | 9.23e-11 | 9 |
aggregate regional part of brain | 9.23e-11 | 9 |
collection of basal ganglia | 9.23e-11 | 9 |
cerebral subcortex | 9.23e-11 | 9 |
gonad | 3.25e-10 | 21 |
indifferent external genitalia | 3.25e-10 | 21 |
indifferent gonad | 3.25e-10 | 21 |
gonad primordium | 3.25e-10 | 21 |
male organism | 8.86e-10 | 22 |
male reproductive system | 8.86e-10 | 22 |
reproductive organ | 9.21e-08 | 48 |
mucosa of oral region | 8.61e-07 | 4 |
respiratory system mucosa | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.39e-25 | 14 |
carcinoma | 4.53e-10 | 106 |
germ cell and embryonal cancer | 8.86e-10 | 22 |
germ cell cancer | 8.86e-10 | 22 |
cell type cancer | 2.08e-07 | 143 |