FFCP PHASE1:Hg19::chr7:137039191..137039196,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000438969_5end | |||
|cluster_id=chr7:137039191..137039196,- | |||
|coexpression_cluster_id=C2060 | |||
|description=CAGE_peak_1_at_ENST00000438969_5end | |||
|id=chr7:137039191..137039196,- | |||
|ontology_enrichment_celltype=CL:0000047!3.40e-18!8;CL:0002319!2.32e-11!25;CL:0000540!6.85e-07!6;CL:0000031!6.85e-07!6;CL:0000404!6.85e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000047;4.27e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.24e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.22e-87;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.53e-42!82;UBERON:0005743!2.92e-40!86;UBERON:0000073!3.07e-36!94;UBERON:0001016!3.07e-36!94;UBERON:0000955!3.37e-32!69;UBERON:0006238!3.37e-32!69;UBERON:0001049!6.49e-31!57;UBERON:0005068!6.49e-31!57;UBERON:0006241!6.49e-31!57;UBERON:0007135!6.49e-31!57;UBERON:0002616!8.41e-30!59;UBERON:0000956!2.40e-25!25;UBERON:0000203!2.40e-25!25;UBERON:0001950!5.10e-25!20;UBERON:0002619!9.18e-23!22;UBERON:0003075!8.90e-20!86;UBERON:0007284!8.90e-20!86;UBERON:0001869!1.03e-19!32;UBERON:0000033!2.23e-19!123;UBERON:0002791!4.24e-19!33;UBERON:0004121!4.74e-19!169;UBERON:0002780!8.24e-19!41;UBERON:0001890!8.24e-19!41;UBERON:0006240!8.24e-19!41;UBERON:0002346!8.51e-19!90;UBERON:0000924!1.52e-18!173;UBERON:0006601!1.52e-18!173;UBERON:0002020!1.61e-18!34;UBERON:0003528!1.61e-18!34;UBERON:0001893!1.61e-18!34;UBERON:0000153!2.35e-18!129;UBERON:0007811!2.35e-18!129;UBERON:0004733!2.36e-18!12;UBERON:0002028!2.36e-18!12;UBERON:0007277!2.36e-18!12;UBERON:0003080!2.44e-18!42;UBERON:0001871!1.85e-17!7;UBERON:0004732!6.18e-17!13;UBERON:0002680!4.96e-16!9;UBERON:0001895!4.96e-16!9;UBERON:0010092!4.96e-16!9;UBERON:0003076!1.16e-14!15;UBERON:0003057!1.16e-14!15;UBERON:0007023!2.71e-14!115;UBERON:0002037!3.47e-14!6;UBERON:0006215!3.47e-14!6;UBERON:0000200!2.45e-13!6;UBERON:0002771!2.12e-12!3;UBERON:0003056!2.92e-12!61;UBERON:0003112!4.44e-10!1;UBERON:0000032!4.44e-10!1;UBERON:0005253!4.44e-10!1;UBERON:0003128!4.44e-10!1;UBERON:0002241!4.44e-10!1;UBERON:0001703!4.44e-10!1;UBERON:0004761!4.44e-10!1;UBERON:0009617!4.44e-10!1;UBERON:0002581!1.07e-09!1;UBERON:0002022!1.17e-09!1;UBERON:0001872!9.55e-08!5;UBERON:0000025!2.15e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.36e-44;6!UBERON:0002680;3.33e-30;9!UBERON:0001895;3.33e-30;9!UBERON:0004733;5.43e-23;12!UBERON:0002028;5.43e-23;12!UBERON:0004732;2.52e-21;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.52e-44,6;UBERON:0006215,1.52e-44,6;UBERON:0002680,3.59e-30,9;UBERON:0001895,3.59e-30,9;UBERON:0010092,3.59e-30,9;UBERON:0004733,5.74e-23,12;UBERON:0002028,5.74e-23,12;UBERON:0007277,5.74e-23,12;UBERON:0004732,2.66e-21,13;UBERON:0003076,1.24e-18,15;UBERON:0003057,1.24e-18,15;UBERON:0001017,3.31e-08,81;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p1@ENST00000438969 | |||
}} | }} |
Latest revision as of 06:27, 31 July 2015
Short description: | p1@ENST00000438969 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000438969_5end |
Coexpression cluster: | C2060_cerebellum_Neural_parietal_Neurons_brain_maxillary_occipital |
Association with transcript: | 32bp_to_ENST00000438969_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.24e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.52e-44 | 6 |
rhombic lip | 1.52e-44 | 6 |
regional part of metencephalon | 3.59e-30 | 9 |
metencephalon | 3.59e-30 | 9 |
future metencephalon | 3.59e-30 | 9 |
segmental subdivision of hindbrain | 5.74e-23 | 12 |
hindbrain | 5.74e-23 | 12 |
presumptive hindbrain | 5.74e-23 | 12 |
segmental subdivision of nervous system | 2.66e-21 | 13 |
posterior neural tube | 1.24e-18 | 15 |
chordal neural plate | 1.24e-18 | 15 |
central nervous system | 3.31e-08 | 81 |
nervous system | 1.68e-07 | 89 |