FFCP PHASE1:Hg19::chr7:40855279..40855286,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:40855279..40855286,+ to FFCP PHASE1:Hg19::chr7:40855279..40855286,+: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:40855279..40855286,+ | |||
|coexpression_cluster_id=C2896 | |||
|description=CAGE_peak_at_chr7:40855279..40855286,+ | |||
|id=chr7:40855279..40855286,+ | |||
|ontology_enrichment_celltype=CL:0002159!7.03e-19!13;CL:0002368!1.95e-14!13;CL:0002076!4.85e-11!43;CL:0002077!3.07e-10!33;CL:0002166!7.15e-09!3;CL:0002621!7.72e-09!3;CL:0000220!1.02e-08!246;CL:0002328!1.28e-08!3;CL:0002371!1.33e-08!591;CL:0002321!1.47e-08!248;CL:0000362!2.65e-08!8;CL:0002539!2.80e-08!10;CL:0000144!3.72e-08!625;CL:0002552!1.75e-07!5;CL:0000548!3.88e-07!679;CL:0000004!3.88e-07!679;CL:0000255!3.88e-07!679;CL:0002202!4.14e-07!9;CL:0002632!4.14e-07!9;CL:0000240!4.44e-07!6;CL:0000311!4.44e-07!6;CL:0000079!4.44e-07!6;CL:0000237!4.44e-07!6;CL:0000036!4.44e-07!6;CL:0000357!4.44e-07!6;CL:0000114!4.44e-07!6;CL:0000012!5.11e-07!682;CL:0000223!5.72e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002159;9.94e-54;14!CL:0000362;1.40e-30;9!CL:0002166;4.94e-24;3!CL:0002621;9.97e-24;3!CL:0002077;2.65e-19;34!CL:0000317;3.56e-17;2!CL:1000448;3.56e-17;2!CL:0002308;3.56e-17;2!CL:0002140;3.56e-17;2!CL:0002368;1.31e-14;13!CL:0000312;2.15e-14;5!CL:0002202;6.45e-14;9!CL:0002632;6.45e-14;9!CL:0000240;4.35e-12;6!CL:0000311;4.35e-12;6!CL:0000079;4.35e-12;6!CL:0000237;4.35e-12;6!CL:0002328;2.71e-11;3!CL:0000307;3.42e-11;3!CL:0002076;1.40e-09;42!CL:0000222;1.74e-09;1!CL:0002327;1.30e-08;4!CL:0000622;2.17e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.03e-53,14;CL:0000362,1.68e-30,9;CL:0002166,3.91e-24,3;CL:0002621,4.95e-24,3;CL:0002077,3.27e-21,34;CL:0000317,3.57e-17,2;CL:1000448,3.57e-17,2;CL:0002308,3.57e-17,2;CL:0002140,3.57e-17,2;CL:0002368,1.37e-14,13;CL:0000312,2.31e-14,5;CL:0002202,7.77e-14,9;CL:0002632,7.77e-14,9;CL:0002076,1.62e-13,42;CL:0000066,2.93e-12,253;CL:0000240,4.61e-12,6;CL:0000311,4.61e-12,6;CL:0000079,4.61e-12,6;CL:0000237,4.61e-12,6;CL:0000036,4.61e-12,6;CL:0000357,4.61e-12,6;CL:0000114,4.61e-12,6;CL:0002328,2.51e-11,3;CL:0000068,4.90e-11,3;CL:0000069,4.90e-11,3;CL:0000307,4.90e-11,3;CL:0000377,4.90e-11,3;CL:0002321,7.93e-10,250;CL:0000223,2.04e-09,58;CL:0000221,7.12e-09,72;CL:0002327,1.40e-08,4;CL:0000622,2.17e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;4.35e-12;6!CL:0000114;4.35e-12;6!CL:0000377;3.42e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001828!2.97e-14!8;UBERON:0002185!1.09e-10!4;UBERON:0001949!7.72e-09!3;UBERON:0004815!1.28e-08!3;UBERON:0002031!1.28e-08!3;UBERON:0000075!2.32e-08!13;UBERON:0005944!2.32e-08!13;UBERON:0004288!2.32e-08!13;UBERON:0003089!2.32e-08!13;UBERON:0004237!2.80e-08!10;UBERON:0004695!2.80e-08!10;UBERON:0002111!2.80e-08!10;UBERON:0004178!2.80e-08!10;UBERON:0003102!3.22e-08!95;UBERON:0000165!5.52e-08!28;UBERON:0000930!5.52e-08!28;UBERON:0000947!1.11e-07!21;UBERON:0010191!1.11e-07!21;UBERON:0003129!1.35e-07!11;UBERON:0002090!3.74e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;9.97e-24;3!UBERON:0010371;2.62e-18;31!UBERON:0001003;3.45e-18;15!UBERON:0007376;3.45e-18;15!UBERON:0001708;3.49e-18;4!UBERON:0008895;3.49e-18;4!UBERON:0002419;3.56e-17;2!UBERON:0007771;3.56e-17;2!UBERON:0003297;3.56e-17;2!UBERON:0001821;3.56e-17;2!UBERON:0003487;3.56e-17;2!UBERON:0001820;3.56e-17;2!UBERON:0001828;1.48e-15;8!UBERON:0011159;1.15e-14;5!UBERON:0004815;2.71e-11;3!UBERON:0002031;2.71e-11;3!UBERON:0000486;1.57e-10;12!UBERON:0003929;1.69e-10;7!UBERON:0003729;1.21e-09;13!UBERON:0003350;3.00e-09;8!UBERON:0004807;1.25e-08;22!UBERON:0001911;1.30e-08;4!UBERON:0007196;2.05e-08;15!UBERON:0001558;2.05e-08;15!UBERON:0002185;4.10e-07;5!UBERON:0011137;6.25e-07;11!UBERON:0010323;6.25e-07;11!UBERON:0005911;7.51e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.95e-24,3;UBERON:0001708,2.93e-18,4;UBERON:0008895,2.93e-18,4;UBERON:0001003,3.84e-18,15;UBERON:0007376,3.84e-18,15;UBERON:0007383,3.84e-18,15;UBERON:0002419,3.57e-17,2;UBERON:0007771,3.57e-17,2;UBERON:0003297,3.57e-17,2;UBERON:0001821,3.57e-17,2;UBERON:0003487,3.57e-17,2;UBERON:0001820,3.57e-17,2;UBERON:0005089,3.57e-17,2;UBERON:0005088,3.57e-17,2;UBERON:0001828,1.18e-15,8;UBERON:0003102,7.91e-15,99;UBERON:0011159,1.00e-14,5;UBERON:0010188,2.31e-12,6;UBERON:0002539,2.31e-12,6;UBERON:0008816,2.31e-12,6;UBERON:0004815,2.51e-11,3;UBERON:0002031,2.51e-11,3;UBERON:0003729,1.06e-09,13;UBERON:0003350,2.32e-09,8;UBERON:0001911,1.40e-08,4;UBERON:0005333,1.40e-08,4;UBERON:0008425,1.40e-08,4;UBERON:0005311,1.40e-08,4;UBERON:0005085,1.49e-08,31;UBERON:0010371,1.74e-08,104;UBERON:0007196,2.29e-08,15;UBERON:0001558,2.29e-08,15;UBERON:0000033,8.56e-08,56;UBERON:0002185,3.92e-07,5;UBERON:0001004,4.81e-07,74;UBERON:0010323,5.88e-07,11;UBERON:0000153,6.18e-07,62;UBERON:0007811,6.18e-07,62;UBERON:0004807,8.56e-07,28 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,1.46062018077475,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,0.90361775633475,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.529636723252875,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.747243402759005,0,0,0,0,0.122834317311768,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0,0,0,0.438977620880838,0.30648779579902,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,1.73934767846967,5.45492241181669,1.72082757233402,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18275827685014,1.1240175325762,1.91005047582099,0.462942225792648,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,3.74935335947108,3.19166043577833,1.70130116690864,0.358234090811393,1.16253575405585,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.535286966391485,0.473107245101804,0.35142424497814,0.601892199455438,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0.232420756919918,0,2.40607764363942,0.0920809889358963,0,0,0.131124414959424,0,0.0770153371044148,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01985876597321,5.20048196829217,0,0.096670718292122,0,0,0,0,0,0,0,0.826424576804891,1.72971060628596,0.765676274967505,0.30347334256665,0.464845549297286,0,0.6970372701606,0.308033580176089,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,1.15466535270614,2.01090682660736,0,0,2.15252686335615,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,0,0.406870733204662,0,0,0,0,0,0,0,5.04739592914604,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,1.46062018077475,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,0.90361775633475,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.529636723252875,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.747243402759005,0,0,0,0,0.122834317311768,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0,0,0,0.438977620880838,0.30648779579902,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,1.73934767846967,5.45492241181669,1.72082757233402,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18275827685014,1.1240175325762,1.91005047582099,0.462942225792648,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,3.74935335947108,3.19166043577833,1.70130116690864,0.358234090811393,1.16253575405585,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.535286966391485,0.473107245101804,0.35142424497814,0.601892199455438,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0.232420756919918,0,2.40607764363942,0.0920809889358963,0,0,0.131124414959424,0,0.0770153371044148,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01985876597321,5.20048196829217,0,0.096670718292122,0,0,0,0,0,0,0,0.826424576804891,1.72971060628596,0.765676274967505,0.30347334256665,0.464845549297286,0,0.6970372701606,0.308033580176089,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,1.15466535270614,2.01090682660736,0,0,2.15252686335615,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,0,0.406870733204662,0,0,0,0,0,0,0,5.04739592914604,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:40855279..40855286,+ | |||
}} | }} |
Latest revision as of 10:00, 31 July 2015
Short description: | p@chr7:40855279..40855286, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:40855279..40855286, + |
Coexpression cluster: | C2896_Mallassezderived_Mammary_Keratinocyte_mesodermal_Sebocyte_Gingival_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data