FFCP PHASE1:Hg19::chr8:30241679..30241690,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:30241679..30241690,+ to FFCP PHASE1:Hg19::chr8:30241679..30241690,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11030 | |EntrezGene=11030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19097 | |HGNC=19097 | ||
|TSSclassifier=strong | |||
|UniProt=F5H357,Q93062 | |UniProt=F5H357,Q93062 | ||
|association_with_transcript=-253bp_to_ENST00000538486,NM_001008710,NM_001008711,NM_001008712,NM_006867,uc003xib.2,uc003xic.1,uc003xid.1,uc003xie.1,uc011lba.1_5end | |||
|cluster_id=chr8:30241679..30241690,+ | |||
|coexpression_cluster_id=C1133 | |||
|description=CAGE_peak_12_at_RBPMS_5end | |||
|id=chr8:30241679..30241690,+ | |||
|ontology_enrichment_celltype=CL:0000136!2.90e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.36e-15;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.44e-13,15 | |||
|ontology_enrichment_development_v019=UBERON:0010227;4.83e-14;1!UBERON:0001045;1.10e-13;1!UBERON:0004874;1.10e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.35e-31!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;4.83e-14;1!UBERON:0001154;1.10e-13;1!UBERON:0000989;1.10e-13;1!UBERON:0000996;1.10e-13;1!UBERON:0002146;1.10e-13;1!UBERON:0001153;1.10e-13;1!UBERON:0008811;1.10e-13;1!UBERON:0009854;1.10e-13;1!UBERON:0005623;1.10e-13;1!UBERON:0001255;1.05e-07;2!UBERON:0001556;1.05e-07;2!UBERON:0001897;1.16e-07;2!UBERON:0002081;1.16e-07;2!UBERON:0010225;1.16e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,5.15e-14,1;UBERON:0000989,6.65e-14,1;UBERON:0008811,6.65e-14,1;UBERON:0006258,6.65e-14,1;UBERON:0005876,6.65e-14,1;UBERON:0004874,6.65e-14,1;UBERON:0002146,9.73e-14,1;UBERON:0005623,9.73e-14,1;UBERON:0000996,1.10e-13,1;UBERON:0001154,2.07e-13,1;UBERON:0001153,2.07e-13,1;UBERON:0001045,2.07e-13,1;UBERON:0007023,7.60e-12,114;UBERON:0001046,1.15e-10,19;UBERON:0000162,1.38e-08,14;UBERON:0001353,1.38e-08,14;UBERON:0000163,1.38e-08,14;UBERON:0006866,1.38e-08,14;UBERON:0000164,1.38e-08,14;UBERON:0000931,1.38e-08,14;UBERON:0004122,4.77e-08,15;UBERON:0001255,1.05e-07,2;UBERON:0001556,1.05e-07,2;UBERON:0001897,1.12e-07,2;UBERON:0010225,1.12e-07,2;UBERON:0002081,1.20e-07,2;UBERON:0010227,1.20e-07,2;UBERON:0003064,2.27e-07,28 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,1.30592814099919,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,1.10513566212459,0,0,0,0.622079175323615,0,0.179021174675609,0,3.94573622547734,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.769502585037971,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0.873633341210151,0,0,0,0,0.872901148395775,0,0.451961481561065,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,1.3749625440701,0.717873024576814,0.399358000997982,0.429226048136571,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.83088067605837,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0.992332043623902,0,0,0,5.44017803369474,1.7548292581589,1.22538230705385,0.327872630709804,0.157054096250234,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,1.48863353516788,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0,0.0657727735628491,0,0.111231401892069,1.25588948560822,0,0,0,0,0.47775168788705,1.1436247068265,0,0,0,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.154348316215889,0,0,6.12870804384764,0,0.196308467114945,0,0,0.169927114687817,0.0939839179798536,0.193373663920732,0,0,0,0,1.46067277649303,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0,0,0.462175628631418,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0.303114792872958,0,2.48750831837634,0.103432995861895,0,0,0,0.186224142887574,0,0.12729431655633,0,0.217716747896961,0,0,0.286888821570705,0,0,0,0,0,0,0.244482888365733,0,1.33151354837103,0.402547587182052,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,1.30592814099919,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,1.10513566212459,0,0,0,0.622079175323615,0,0.179021174675609,0,3.94573622547734,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.769502585037971,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0.873633341210151,0,0,0,0,0.872901148395775,0,0.451961481561065,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,1.3749625440701,0.717873024576814,0.399358000997982,0.429226048136571,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.83088067605837,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0.992332043623902,0,0,0,5.44017803369474,1.7548292581589,1.22538230705385,0.327872630709804,0.157054096250234,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,1.48863353516788,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0,0.0657727735628491,0,0.111231401892069,1.25588948560822,0,0,0,0,0.47775168788705,1.1436247068265,0,0,0,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.154348316215889,0,0,6.12870804384764,0,0.196308467114945,0,0,0.169927114687817,0.0939839179798536,0.193373663920732,0,0,0,0,1.46067277649303,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0,0,0.462175628631418,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0.303114792872958,0,2.48750831837634,0.103432995861895,0,0,0,0.186224142887574,0,0.12729431655633,0,0.217716747896961,0,0,0.286888821570705,0,0,0,0,0,0,0.244482888365733,0,1.33151354837103,0.402547587182052,0 | ||
|short_description=p12@RBPMS | |||
}} | }} |
Latest revision as of 23:11, 17 September 2015
Short description: | p12@RBPMS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RBPMS_5end |
Coexpression cluster: | C1133_mature_smooth_bladder_aorta_heart_adipose_penis |
Association with transcript: | -253bp_to_ENST00000538486, NM_001008710, NM_001008711, NM_001008712, NM_006867, uc003xib.2, uc003xic.1, uc003xid.1, uc003xie.1, uc011lba.1_5end |
EntrezGene: | RBPMS |
HGNC: | 19097 |
UniProt: | F5H357Q93062 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.44e-13 | 15 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 5.15e-14 | 1 |
penis | 6.65e-14 | 1 |
intromittent organ | 6.65e-14 | 1 |
lateral plate mesenchyme | 6.65e-14 | 1 |
undifferentiated genital tubercle | 6.65e-14 | 1 |
somatopleure | 6.65e-14 | 1 |
pulmonary valve | 9.73e-14 | 1 |
semi-lunar valve | 9.73e-14 | 1 |
vagina | 1.10e-13 | 1 |
vermiform appendix | 2.07e-13 | 1 |
caecum | 2.07e-13 | 1 |
midgut | 2.07e-13 | 1 |
adult organism | 7.60e-12 | 114 |
hindgut | 1.15e-10 | 19 |
cloaca | 1.38e-08 | 14 |
anal region | 1.38e-08 | 14 |
embryonic cloaca | 1.38e-08 | 14 |
terminal part of digestive tract | 1.38e-08 | 14 |
primitive urogenital sinus | 1.38e-08 | 14 |
proctodeum | 1.38e-08 | 14 |
genitourinary system | 4.77e-08 | 15 |
urinary bladder | 1.05e-07 | 2 |
lower urinary tract | 1.05e-07 | 2 |
dorsal plus ventral thalamus | 1.12e-07 | 2 |
thalamic complex | 1.12e-07 | 2 |
cardiac atrium | 1.20e-07 | 2 |
future cardiac atrium | 1.20e-07 | 2 |
intermediate mesoderm | 2.27e-07 | 28 |