FFCP PHASE1:Hg19::chr8:55471739..55471763,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:55471739..55471763,+ to FFCP PHASE1:Hg19::chr8:55471739..55471763,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6101 | |EntrezGene=6101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=10263 | |HGNC=10263 | ||
|TSSclassifier=strong | |||
|UniProt=E7EVW9 | |UniProt=E7EVW9 | ||
|association_with_transcript=10bp_to_ENST00000427058_5end | |||
|cluster_id=chr8:55471739..55471763,+ | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_2_at_RP1_5end | |||
|id=chr8:55471739..55471763,+ | |||
|ontology_enrichment_celltype=CL:0000239!4.71e-12!3;CL:1000615!4.71e-12!3;CL:0002306!4.71e-12!3 | |||
|ontology_enrichment_celltype_v019=CL:0000239;2.37e-11;3!CL:1000615;2.37e-11;3!CL:0002306;2.37e-11;3!CL:0002563;4.08e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.85e-11,3;CL:1000615,2.85e-11,3;CL:0002306,2.85e-11,3;CL:0002563,4.16e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.77e-10;29!UBERON:0000358;3.25e-09;1 | |||
|ontology_enrichment_disease=DOID:4468!6.51e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006853!4.71e-12!3;UBERON:0007685!4.71e-12!3;UBERON:0004134!4.71e-12!3;UBERON:0000341!3.73e-09!2;UBERON:0003127!4.19e-09!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;1.91e-17;2!UBERON:0003127;2.44e-17;2!UBERON:0006853;2.37e-11;3!UBERON:0007685;2.37e-11;3!UBERON:0004134;2.37e-11;3!UBERON:0002171;8.67e-10;1!UBERON:0006518;8.67e-10;1!UBERON:0008949;8.67e-10;1!UBERON:0000101;8.67e-10;1!UBERON:0002167;8.67e-10;1!UBERON:0001242;4.08e-09;4!UBERON:0001262;4.08e-09;4!UBERON:0004786;4.08e-09;4!UBERON:0004808;4.08e-09;4!UBERON:0001277;4.08e-09;4!UBERON:0005178;3.89e-07;34!UBERON:0002224;3.89e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.76e-17,2;UBERON:0003127,2.25e-17,2;UBERON:0006853,2.85e-11,3;UBERON:0007685,2.85e-11,3;UBERON:0004134,2.85e-11,3;UBERON:0002171,8.68e-10,1;UBERON:0006518,8.68e-10,1;UBERON:0008949,8.68e-10,1;UBERON:0000101,8.68e-10,1;UBERON:0002167,8.68e-10,1;UBERON:0001242,4.16e-09,4;UBERON:0001262,4.16e-09,4;UBERON:0004786,4.16e-09,4;UBERON:0004808,4.16e-09,4;UBERON:0001277,4.16e-09,4;UBERON:0005178,2.56e-08,34;UBERON:0002224,2.56e-08,34;UBERON:0005181,4.58e-08,35;UBERON:0005177,8.71e-08,101;UBERON:0008947,2.19e-07,38;UBERON:0003258,2.19e-07,38;UBERON:0009569,7.63e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73290365168481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27241036569879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10922128611516,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,2.03901018436031,0.831076008928724,1.11937377361089,0,0,0,0,0,4.43076350085206,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23647103495506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5602073798847,0,0,0,0,0,0,0,0,0,13.1503672245706,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,9.04659657177221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52178263357434,1.46872846777995,14.3616457666393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,18.0470727239404,163.806885913852,33.96760253847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1588337906688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,1.14553434272025,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46067277649303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,9.80876316744512,13.3316081619695,0,0,0,0,0,0.217716747896961,0,0,20.2973841261274,3.99192427855216,0,0,0,0,2.34640942403454,0.488965776731466,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73290365168481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27241036569879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10922128611516,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,2.03901018436031,0.831076008928724,1.11937377361089,0,0,0,0,0,4.43076350085206,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23647103495506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5602073798847,0,0,0,0,0,0,0,0,0,13.1503672245706,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,9.04659657177221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52178263357434,1.46872846777995,14.3616457666393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,18.0470727239404,163.806885913852,33.96760253847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1588337906688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,1.14553434272025,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46067277649303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,9.80876316744512,13.3316081619695,0,0,0,0,0,0.217716747896961,0,0,20.2973841261274,3.99192427855216,0,0,0,0,2.34640942403454,0.488965776731466,0,0,0,0 | ||
|short_description=p2@RP1 | |||
}} | }} |
Latest revision as of 12:44, 18 September 2015
Short description: | p2@RP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RP1_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | 10bp_to_ENST00000427058_5end |
EntrezGene: | RP1 |
HGNC: | 10263 |
UniProt: | E7EVW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.85e-11 | 3 |
kidney cortex tubule cell | 2.85e-11 | 3 |
epithelial cell of proximal tubule | 2.85e-11 | 3 |
intestinal epithelial cell | 4.16e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
throat | 1.76e-17 | 2 |
open tracheal system trachea | 2.25e-17 | 2 |
renal cortex tubule | 2.85e-11 | 3 |
region of nephron tubule | 2.85e-11 | 3 |
proximal tubule | 2.85e-11 | 3 |
lower lobe of right lung | 8.68e-10 | 1 |
right lung lobe | 8.68e-10 | 1 |
lower lobe of lung | 8.68e-10 | 1 |
lobe of lung | 8.68e-10 | 1 |
right lung | 8.68e-10 | 1 |
intestinal mucosa | 4.16e-09 | 4 |
wall of intestine | 4.16e-09 | 4 |
gastrointestinal system mucosa | 4.16e-09 | 4 |
gastrointestinal system epithelium | 4.16e-09 | 4 |
intestinal epithelium | 4.16e-09 | 4 |
thoracic cavity element | 2.56e-08 | 34 |
thoracic cavity | 2.56e-08 | 34 |
thoracic segment organ | 4.58e-08 | 35 |
trunk region element | 8.71e-08 | 101 |
respiratory primordium | 2.19e-07 | 38 |
endoderm of foregut | 2.19e-07 | 38 |
subdivision of trunk | 7.63e-07 | 112 |