FFCP PHASE1:Hg19::chr9:110500235..110500238,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:110500235..110500238,+ | |||
|description=CAGE_peak_at_chr9:110500235..110500238,+ | |||
|id=chr9:110500235..110500238,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000307;6.76e-18;3!CL:0002368;2.63e-16;13!CL:0000306;1.13e-13;4!CL:0002222;1.13e-13;4!CL:0002224;1.13e-13;4!CL:0002076;6.38e-10;42!CL:0002202;7.48e-07;9!CL:0002632;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.76e-18,3;CL:0000069,6.76e-18,3;CL:0000307,6.76e-18,3;CL:0000377,6.76e-18,3;CL:0002368,2.63e-16,13;CL:0000306,1.29e-13,4;CL:0002222,1.29e-13,4;CL:0002224,1.29e-13,4;CL:0002076,1.56e-11,42;CL:0000223,1.35e-08,58;CL:0002202,7.48e-07,9;CL:0002632,7.48e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008814;7.14e-26;2!UBERON:0010056;7.14e-26;2!CL:0000377;6.76e-18;3 | |||
|ontology_enrichment_disease=DOID:1749!1.46e-14!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.30e-10!12;UBERON:0003729!1.49e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;9.45e-18;3!UBERON:0001033;9.45e-18;3!UBERON:0003343;1.13e-13;4!UBERON:0010077;1.13e-13;4!UBERON:0005389;1.13e-13;4!UBERON:0000484;1.13e-13;4!UBERON:0004785;1.13e-13;4!UBERON:0000965;1.13e-13;4!UBERON:0001803;1.13e-13;4!UBERON:0000020;1.17e-09;23!UBERON:0000974;1.44e-09;6!UBERON:0001032;2.67e-09;24!UBERON:0004456;2.67e-09;24!UBERON:0003126;1.89e-08;7!UBERON:0001005;1.89e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,8.00e-18,3;UBERON:0001033,8.00e-18,3;UBERON:0010056,8.00e-18,3;UBERON:0003343,1.00e-13,4;UBERON:0004785,1.00e-13,4;UBERON:0010077,1.29e-13,4;UBERON:0005389,1.29e-13,4;UBERON:0000484,1.29e-13,4;UBERON:0002546,1.29e-13,4;UBERON:0000965,1.29e-13,4;UBERON:0001803,1.29e-13,4;UBERON:0003073,1.29e-13,4;UBERON:0005426,1.29e-13,4;UBERON:0000020,2.67e-09,24;UBERON:0001032,2.67e-09,24;UBERON:0004456,2.67e-09,24;UBERON:0000065,3.61e-09,54;UBERON:0003126,1.89e-08,7;UBERON:0001005,1.89e-08,7;UBERON:0000076,1.80e-07,8;UBERON:0001004,6.51e-07,74 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.328508624055237,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,0,0,1.27612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.288666338176536,0,2.17781969722645,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0.889563386041866,0.247127877893006,0.313265848516366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0.326587360109409,1.19730191562487,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0.151649117541648,0,0,0,0,0.149254802886874,0.467426619694449,0.554805861502613,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,1.38630799380406,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0.224263725161227,0,0,0,0,0.0673520530145875,0,0,0.569822880276821,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr9:110500235..110500238,+ | |||
}} | }} |
Latest revision as of 21:31, 31 July 2015
Short description: | p@chr9:110500235..110500238, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:110500235..110500238, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 6.76e-18 | 3 |
branched duct epithelial cell | 6.76e-18 | 3 |
tracheal epithelial cell | 6.76e-18 | 3 |
tracheoblast | 6.76e-18 | 3 |
respiratory epithelial cell | 2.63e-16 | 13 |
crystallin accumulating cell | 1.29e-13 | 4 |
vertebrate lens cell | 1.29e-13 | 4 |
lens epithelial cell | 1.29e-13 | 4 |
endo-epithelial cell | 1.56e-11 | 42 |
endodermal cell | 1.35e-08 | 58 |
epithelial cell of tracheobronchial tree | 7.48e-07 | 9 |
epithelial cell of lower respiratory tract | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
tongue | 8.00e-18 | 3 |
gustatory system | 8.00e-18 | 3 |
future tongue | 8.00e-18 | 3 |
mucosa of oral region | 1.00e-13 | 4 |
respiratory system mucosa | 1.00e-13 | 4 |
cuboidal epithelium | 1.29e-13 | 4 |
transparent eye structure | 1.29e-13 | 4 |
simple cuboidal epithelium | 1.29e-13 | 4 |
cranial placode | 1.29e-13 | 4 |
lens of camera-type eye | 1.29e-13 | 4 |
epithelium of lens | 1.29e-13 | 4 |
lens placode | 1.29e-13 | 4 |
lens vesicle | 1.29e-13 | 4 |
sense organ | 2.67e-09 | 24 |
sensory system | 2.67e-09 | 24 |
entire sense organ system | 2.67e-09 | 24 |
respiratory tract | 3.61e-09 | 54 |
trachea | 1.89e-08 | 7 |
respiratory airway | 1.89e-08 | 7 |
external ectoderm | 1.80e-07 | 8 |
respiratory system | 6.51e-07 | 74 |