FFCP PHASE1:Hg19::chr9:32526172..32526181,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:32526172..32526181,- to FFCP PHASE1:Hg19::chr9:32526172..32526181,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23586 | |EntrezGene=23586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19102 | |HGNC=19102 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5W6 | |UniProt=F5H5W6 | ||
|association_with_transcript=11bp_to_ENST00000545044_5end | |||
|cluster_id=chr9:32526172..32526181,- | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_3_at_DDX58_5end | |||
|id=chr9:32526172..32526181,- | |||
|ontology_enrichment_celltype=CL:0002057!2.77e-07!42;CL:0000860!5.14e-07!45;CL:0000066!9.21e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-18;33!CL:0002057;1.14e-18;33!CL:0000473;1.20e-13;39!CL:0000234;1.20e-13;39!CL:0000576;2.92e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.95e-15,42;CL:0002057,3.95e-15,42;CL:0000473,3.84e-14,48;CL:0000234,3.84e-14,48;CL:0000766,1.39e-11,72;CL:0002194,3.45e-10,59;CL:0000576,3.45e-10,59;CL:0000040,3.45e-10,59;CL:0000559,3.45e-10,59;CL:0002009,1.10e-09,61;CL:0000839,1.44e-08,66;CL:0000557,2.30e-08,67;CL:0002621,9.24e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!6.35e-07!625;UBERON:0000480!8.93e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,4.41e-09,93;UBERON:0004765,7.68e-09,90;UBERON:0002371,1.64e-08,76;UBERON:0001474,2.56e-08,82;UBERON:0002193,1.18e-07,108;UBERON:0001434,2.44e-07,100;UBERON:0001949,9.24e-07,3 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.410623275218653,0.376627918784408,0.382067028739756,0.328402357799783,0.157421562627358,0,0.383829398097213,0.154816123316076,1.83884244895785,0,0.369754010166788,0,0,0,0,0.401088894940283,0,0.447830948479849,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0,0,3.74000110018796,3.58624989140741,7.56743135643473,1.03423704220986,0,0,0.564727018627814,0,0.224723484445085,4.89734227793444,5.45579346029359,4.47535988059329,7.91643120448119,2.99195486432448,6.81959600852311,10.447532590629,3.40431134814684,4.9825779919646,2.26123798731069,2.08593167368081,5.64690996233303,10.8971910474006,11.7848843516021,11.7091083353127,0.211255286311942,0.212604299965044,0.628975936525128,0.22465726229299,0.150176892841506,0.16072558669708,0.285012743741249,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0.838998872419812,0.550236083880135,0.417989933073621,2.06733407335463,1.77883131343355,1.67360306382335,0.805658634218294,0,0.488124115096339,1.47065232138347,0,0.803697554556718,0,0.563057402416611,0,0,0.549605231791222,1.31780417436063,7.75560528296651,0,0,0.379891534993739,0.794455084879313,0,0.709336764396714,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0.408308342509787,0.859840221182376,0,4.75201142912821,0.989067717114227,0,0,0,0.125118519871964,0.831192346452549,0,0,0.751190294532984,0.226864366320042,0.179389635688862,0,0,0.600182192168805,0,0.257640540045629,0.37223371266318,0.506328996723799,0.0974370051611986,0,0.184099797284599,0.484938170456436,0.355009592516614,0.10075209822764,0,1.73934767846967,1.63647672354501,1.43402297694502,0.609868530647977,0.530119073285941,0.929551542956147,0.621966330092223,0.756962552626885,0,0,0,0,0.464367928031979,0.721879481669586,0.473227200159376,0.505754070234305,0.723033089650446,0.55146986366197,0.435758888184812,0.237270619111097,0.404493924480493,1.17732879075208,0,0,0,0,0,0,0,0,0,1.59884970106048,0.171567810298526,1.09750285408626,1.1240175325762,0.904760751704678,0.370353780634118,0.325808305310325,0,0,0.34779121492523,0.234817388471643,0.577465791044295,0,1.14152491340759,0,0,0.492434012174795,0.702012795417713,0.891786973732369,0.93733833986777,3.52762469217605,4.39502801451398,0.0895585227028483,0.290633938513962,0.383382679165211,0.492663237895943,0.352193736052904,0.414656231081544,0.144119953416961,0,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,1.14330573052231,0.224262168690721,0,0.22001485746285,0,0,0,1.06375246633948,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.299918973546171,3.64871341923571,0,0,0.479249710983165,0,0,0.868687840005475,0.205476322550383,0.716243852959582,0,0.591092280605782,0,0.128343036279748,0.508189248444927,0,0,0.167516265334349,0,2.24702107184155,0,2.48649308061621,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0.347534457872331,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0.160853921143607,0,0.771048469013278,0.355123450626254,1.14978018419333,1.03850885836724,0.929683027679674,0.241718899183244,1.20303882181971,0,0.34444334449382,0.182091168006717,0.131124414959424,0.451199612907412,0.847168708148562,0,0,1.47772280450026,0,0,0.863663664408557,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0.309123034943167,0.27470839445503,0.742585499285292,0.574265537996172,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0.827019434907183,0.107420244868274,0.290033387828457,0.0852266274161009,0,0.165284915360978,0.192190067365106,0,0,0.929691098594572,0.31481234683064,0,3.08033580176089,0,0,0.37064843820784,0.429374660225974,1.116475108079,0.949138274156178,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,11.2108205230391,1.05650146756755,0.272999822815972,0.141405431953713,0,0,0,3.5076070820301,0,0,0.405820753925408,0,0.281695602532241,0.430234056612155,0,0.35667105148125,0.709522128141196,0.422215270595328,0.329294892959902,0,0,0.192444225451024,0,0,0.376575203107117,0,0,0,1.1486170010348,0.507447609232169,1.52927441428475,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0.144269212976445,0,0.318852545457645,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.447352215784832,0,0,0.278406173895242,0,0,0,0,0,0.879049075631364,0.121360521749513,0.11144338427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| ||
|short_description=p3@DDX58 | |||
}} | }} |
Latest revision as of 02:35, 17 September 2015
Short description: | p3@DDX58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DDX58_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | 11bp_to_ENST00000545044_5end |
EntrezGene: | DDX58 |
HGNC: | 19102 |
UniProt: | F5H5W6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.95e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.95e-15 | 42 |
defensive cell | 3.84e-14 | 48 |
phagocyte | 3.84e-14 | 48 |
myeloid leukocyte | 1.39e-11 | 72 |
monopoietic cell | 3.45e-10 | 59 |
monocyte | 3.45e-10 | 59 |
monoblast | 3.45e-10 | 59 |
promonocyte | 3.45e-10 | 59 |
macrophage dendritic cell progenitor | 1.10e-09 | 61 |
myeloid lineage restricted progenitor cell | 1.44e-08 | 66 |
granulocyte monocyte progenitor cell | 2.30e-08 | 67 |
gingival epithelial cell | 9.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
immune system | 4.41e-09 | 93 |
skeletal element | 7.68e-09 | 90 |
bone marrow | 1.64e-08 | 76 |
bone element | 2.56e-08 | 82 |
hemolymphoid system | 1.18e-07 | 108 |
skeletal system | 2.44e-07 | 100 |
gingival epithelium | 9.24e-07 | 3 |