FFCP PHASE1:Hg19::chrX:153991025..153991046,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:153991025..153991046,+ to FFCP PHASE1:Hg19::chrX:153991025..153991046,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1736 | |EntrezGene=1736 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2890 | |HGNC=2890 | ||
|TSSclassifier=strong | |||
|UniProt=O60832 | |UniProt=O60832 | ||
|association_with_transcript=0bp_to_ENST00000369550,NM_001142463,NM_001363,uc004fmm.2,uc010nvf.2_5end | |||
|cluster_id=chrX:153991025..153991046,+ | |||
|description=CAGE_peak_3_at_DKC1_5end | |||
|id=chrX:153991025..153991046,+ | |||
|ontology_enrichment_celltype=CL:0000838!9.70e-16!52;CL:0000542!1.74e-15!53;CL:0000051!1.74e-15!53;CL:0000037!2.63e-13!172;CL:0000566!2.63e-13!172;CL:0002032!2.45e-11!165;CL:0000837!2.45e-11!165;CL:0000988!5.90e-11!182;CL:0000791!3.88e-10!18;CL:0000789!3.88e-10!18;CL:0002420!3.88e-10!18;CL:0002419!3.88e-10!18;CL:0000790!3.88e-10!18;CL:0000738!6.02e-10!140;CL:0002031!2.29e-09!124;CL:0000084!2.47e-09!25;CL:0000827!2.47e-09!25;CL:0002087!6.40e-09!119;CL:0000625!6.01e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.53e-10;18!CL:0000789;3.53e-10;18!CL:0002419;3.53e-10;18!CL:0000084;1.69e-09;25!CL:0000542;3.89e-09;53!CL:0000625;4.70e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.45e-16,52;CL:0000542,9.88e-16,53;CL:0000051,9.88e-16,53;CL:0000037,9.42e-14,168;CL:0002032,1.01e-11,161;CL:0000837,1.01e-11,161;CL:0000988,1.20e-11,177;CL:0000791,2.73e-10,18;CL:0000789,2.73e-10,18;CL:0002420,2.73e-10,18;CL:0002419,2.73e-10,18;CL:0000790,2.73e-10,18;CL:0000738,2.78e-10,136;CL:0002031,1.77e-09,120;CL:0000084,1.80e-09,25;CL:0000827,1.80e-09,25;CL:0002087,4.53e-09,115;CL:0000625,4.82e-07,11;CL:0000945,9.94e-07,24;CL:0000826,9.94e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;3.53e-10;18!CL:0000051;3.89e-09;53 | |||
|ontology_enrichment_disease=DOID:162!6.51e-08!235;DOID:0050687!8.36e-08!143;DOID:14566!3.51e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.34e-07,235;DOID:0050687,1.57e-07,143;DOID:14566,5.81e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@DKC1 | |||
}} | }} |
Latest revision as of 04:17, 20 September 2015
Short description: | p3@DKC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DKC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000369550, NM_001142463, NM_001363, uc004fmm.2, uc010nvf.2_5end |
EntrezGene: | DKC1 |
HGNC: | 2890 |
UniProt: | O60832 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.45e-16 | 52 |
lymphocyte | 9.88e-16 | 53 |
common lymphoid progenitor | 9.88e-16 | 53 |
hematopoietic stem cell | 9.42e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.01e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.01e-11 | 161 |
hematopoietic cell | 1.20e-11 | 177 |
mature alpha-beta T cell | 2.73e-10 | 18 |
alpha-beta T cell | 2.73e-10 | 18 |
immature T cell | 2.73e-10 | 18 |
mature T cell | 2.73e-10 | 18 |
immature alpha-beta T cell | 2.73e-10 | 18 |
leukocyte | 2.78e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 1.77e-09 | 120 |
T cell | 1.80e-09 | 25 |
pro-T cell | 1.80e-09 | 25 |
nongranular leukocyte | 4.53e-09 | 115 |
CD8-positive, alpha-beta T cell | 4.82e-07 | 11 |
lymphocyte of B lineage | 9.94e-07 | 24 |
pro-B cell | 9.94e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.34e-07 | 235 |
cell type cancer | 1.57e-07 | 143 |
disease of cellular proliferation | 5.81e-07 | 239 |