FFCP PHASE1:Mm9::chr11:98210066..98210077,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:98210066..98210077,+ to FFCP PHASE1:Mm9::chr11:98210066..98210077,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19049 | |EntrezGene=19049 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2013 | |||
|TSSclassifier=NA | |||
|UniProt=Q60829 | |UniProt=Q60829 | ||
|association_with_transcript=14bp_to_NM_144828,uc007lfz.1_5end | |||
|cluster_id=chr11:98210066..98210077,+ | |||
|description=CAGE_peak_4_at_Ppp1r1b_5end | |||
|id=chr11:98210066..98210077,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.02e-07!9;CL:0002251!1.02e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.93e-14,9;CL:0002251,4.93e-14,9;CL:0000239,6.14e-09,6;CL:0000677,6.14e-09,6;CL:0000584,6.14e-09,6;CL:0000066,2.32e-08,25;CL:0002076,1.28e-07,15;CL:0000075,1.52e-07,7;CL:0002250,9.55e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.09e-13!43;UBERON:0000344!2.68e-12!15;UBERON:0001242!7.87e-11!13;UBERON:0000060!7.87e-11!13;UBERON:0001262!7.87e-11!13;UBERON:0004786!7.87e-11!13;UBERON:0005409!5.43e-08!59;UBERON:0003350!1.02e-07!9;UBERON:0004808!1.02e-07!9;UBERON:0001277!1.02e-07!9;UBERON:0000485!1.03e-07!11;UBERON:0002616!6.70e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.40e-32,31;UBERON:0000344,2.59e-23,15;UBERON:0005409,3.49e-22,47;UBERON:0001242,2.47e-20,13;UBERON:0001262,2.47e-20,13;UBERON:0004786,2.47e-20,13;UBERON:0003350,4.93e-14,9;UBERON:0004808,4.93e-14,9;UBERON:0001277,4.93e-14,9;UBERON:0004923,5.57e-13,24;UBERON:0000485,4.14e-11,11;UBERON:0002108,4.78e-08,4;UBERON:0011216,3.78e-07,194;UBERON:0001007,4.86e-07,116;UBERON:0001555,4.86e-07,116;UBERON:0007026,4.86e-07,116;UBERON:0004119,8.69e-07,118;UBERON:0000925,8.69e-07,118;UBERON:0006595,8.69e-07,118 | |||
|phase1_expression=0.160148847104794,1.74487703819681,1.36499771816861,2.72217790176147,1.50268718983904,4.36486106970913,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,3.83981814704176,3.89995777814189,2.8711598205751,3.4460959692726,3.44753972297422,9.31114755336232,8.82105454159758,5.09980174507201,0,0,0,14.4425809875637,19.4494535069436,14.2918549383658,0,0,0,0,0,0,0,0,0,2.34717403304412,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,0,0.633831403506179,0,0.889294796111139,0,0,0,0,0.384218305321555,1.14058573539325,0.810035629990144,0.841299845405528,0.571301968807607,0.220868540951614,0.489963196859816,0.287536413054709,0.919218786610021,1.10115880999389,0.766124028511126,1.38245879930619,0.131886287730194,0.0914876436024097,0,0.837548997004143,1.68828783009504,1.37518422999129,0,0,0,0,0.0755715601067855,1.44932244350839,0,0,0,0,0,1.68533304158102,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,1.59857431606684,0,0,0,0,0.230615497256059,0,0,0.125666591329675,0,0.144599356919912,0,0,0.662524555381181,0,0,1.75668478206928,4.1889341362691,7.40825460104915,0,0,0,0.149790639404823,26.5350349634803,3.64397621127307,2.60736480288415,3.58001640262463,2.0778804455956,8.4365456795234,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.154267112887378,0.232533944750408,0.536546802799238,0.467061369468678,0.493679549740441,0,0.0810688095458557,0,0.219550115291051,0.268412837520744,1.89260953707715,0,2.97376904685418,20.3626936330929,0,0,0,1.00841762311671,0.22237804384487,2.28270751335071,6.64340686162316,2.63518327558417,3.01602250560323,3.58121649674071,3.31438948102504,4.49409704327111,3.8904848977445,5.57595565112228,0,0,0,0.203651327845314,0.193952487167626,0,0,0.590440591918409,1.41298855057237,1.1105744752962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,1.28440471990234,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0.922305443831782,0.516856586336442,0.363533729477506,0.712994756769443,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0.164140899745061,4.37221254944776,0.741701208042039,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0.209088296014469,0,0,0,0,4.92536898508813,2.4853572523477,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0,0.280924522409647,0.128050304809739,0.17230640686684,0,0.231768651889711,0.578727661391115,0.412085900803307,0,0.685738504770831,0.177475806159338,0,0.145346416632329,0.282328141245992,0.169229215783353,0.548783918618318,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0.160148847104794,1.74487703819681,1.36499771816861,2.72217790176147,1.50268718983904,4.36486106970913,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,3.83981814704176,3.89995777814189,2.8711598205751,3.4460959692726,3.44753972297422,9.31114755336232,8.82105454159758,5.09980174507201,0,0,0,14.4425809875637,19.4494535069436,14.2918549383658,0,0,0,0,0,0,0,0,0,2.34717403304412,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,0,0.633831403506179,0,0.889294796111139,0,0,0,0,0.384218305321555,1.14058573539325,0.810035629990144,0.841299845405528,0.571301968807607,0.220868540951614,0.489963196859816,0.287536413054709,0.919218786610021,1.10115880999389,0.766124028511126,1.38245879930619,0.131886287730194,0.0914876436024097,0,0.837548997004143,1.68828783009504,1.37518422999129,0,0,0,0,0.0755715601067855,1.44932244350839,0,0,0,0,0,1.68533304158102,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,1.59857431606684,0,0,0,0,0.230615497256059,0,0,0.125666591329675,0,0.144599356919912,0,0,0.662524555381181,0,0,1.75668478206928,4.1889341362691,7.40825460104915,0,0,0,0.149790639404823,26.5350349634803,3.64397621127307,2.60736480288415,3.58001640262463,2.0778804455956,8.4365456795234,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.154267112887378,0.232533944750408,0.536546802799238,0.467061369468678,0.493679549740441,0,0.0810688095458557,0,0.219550115291051,0.268412837520744,1.89260953707715,0,2.97376904685418,20.3626936330929,0,0,0,1.00841762311671,0.22237804384487,2.28270751335071,6.64340686162316,2.63518327558417,3.01602250560323,3.58121649674071,3.31438948102504,4.49409704327111,3.8904848977445,5.57595565112228,0,0,0,0.203651327845314,0.193952487167626,0,0,0.590440591918409,1.41298855057237,1.1105744752962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,1.28440471990234,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0.922305443831782,0.516856586336442,0.363533729477506,0.712994756769443,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0.164140899745061,4.37221254944776,0.741701208042039,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0.209088296014469,0,0,0,0,4.92536898508813,2.4853572523477,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0,0.280924522409647,0.128050304809739,0.17230640686684,0,0.231768651889711,0.578727661391115,0.412085900803307,0,0.685738504770831,0.177475806159338,0,0.145346416632329,0.282328141245992,0.169229215783353,0.548783918618318,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p4@Ppp1r1b | |||
}} | }} |
Latest revision as of 02:53, 26 September 2015
Short description: | p4@Ppp1r1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ppp1r1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2013 |
Association with transcript: | 14bp_to_NM_144828, uc007lfz.1_5end |
EntrezGene: | Ppp1r1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.93e-14 | 9 |
epithelial cell of alimentary canal | 4.93e-14 | 9 |
brush border epithelial cell | 6.14e-09 | 6 |
gut absorptive cell | 6.14e-09 | 6 |
enterocyte | 6.14e-09 | 6 |
epithelial cell | 2.32e-08 | 25 |
endo-epithelial cell | 1.28e-07 | 15 |
columnar/cuboidal epithelial cell | 1.52e-07 | 7 |
intestinal crypt stem cell | 9.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.40e-32 | 31 |
mucosa | 2.59e-23 | 15 |
gastrointestinal system | 3.49e-22 | 47 |
intestinal mucosa | 2.47e-20 | 13 |
wall of intestine | 2.47e-20 | 13 |
gastrointestinal system mucosa | 2.47e-20 | 13 |
epithelium of mucosa | 4.93e-14 | 9 |
gastrointestinal system epithelium | 4.93e-14 | 9 |
intestinal epithelium | 4.93e-14 | 9 |
organ component layer | 5.57e-13 | 24 |
simple columnar epithelium | 4.14e-11 | 11 |
small intestine | 4.78e-08 | 4 |
organ system subdivision | 3.78e-07 | 194 |
digestive system | 4.86e-07 | 116 |
digestive tract | 4.86e-07 | 116 |
primitive gut | 4.86e-07 | 116 |
endoderm-derived structure | 8.69e-07 | 118 |
endoderm | 8.69e-07 | 118 |
presumptive endoderm | 8.69e-07 | 118 |