FFCP PHASE1:Mm9::chr15:5194164..5194175,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr15:5194164..5194175,- to FFCP PHASE1:Mm9::chr15:5194164..5194175,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19219 | |EntrezGene=19219 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q91VE4 | |UniProt=Q91VE4 | ||
|association_with_transcript=0bp_to_ENSMUST00000120563_5end | |||
|cluster_id=chr15:5194164..5194175,- | |||
|description=CAGE_peak_2_at_Ptger4_5end | |||
|id=chr15:5194164..5194175,- | |||
|ontology_enrichment_celltype=CL:0000063!1.59e-07!66;CL:0000838!7.05e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.43e-10,17;CL:0002087,7.43e-10,17;CL:0000838,9.97e-10,12;CL:0000084,4.74e-09,11;CL:0000827,4.74e-09,11;CL:0000988,5.71e-09,32;CL:0002032,5.71e-09,32;CL:0000037,5.71e-09,32;CL:0000837,5.71e-09,32;CL:0000542,1.08e-08,13;CL:0000051,1.08e-08,13;CL:0002563,1.94e-08,9;CL:0002251,1.94e-08,9;CL:0000791,5.58e-08,9;CL:0000789,5.58e-08,9;CL:0002420,5.58e-08,9;CL:0002419,5.58e-08,9;CL:0000790,5.58e-08,9;CL:0000239,1.38e-07,6;CL:0000677,1.38e-07,6;CL:0000584,1.38e-07,6;CL:0002076,2.37e-07,15;CL:0000624,2.67e-07,8;CL:0002320,6.06e-07,46;CL:0000134,6.06e-07,46;CL:0002031,8.12e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.45e-09!48;UBERON:0000344!2.03e-08!15;UBERON:0002390!5.09e-08!45;UBERON:0003061!5.09e-08!45;UBERON:0001242!1.13e-07!13;UBERON:0000060!1.13e-07!13;UBERON:0001262!1.13e-07!13;UBERON:0004786!1.13e-07!13;UBERON:0002370!3.26e-07!23;UBERON:0000974!3.26e-07!23;UBERON:0004807!3.26e-07!23;UBERON:0005058!3.26e-07!23;UBERON:0003351!3.26e-07!23;UBERON:0009113!3.26e-07!23;UBERON:0003295!3.26e-07!23;UBERON:0009722!3.26e-07!23;UBERON:0005562!3.26e-07!23;UBERON:0007690!3.26e-07!23;UBERON:0006562!3.90e-07!24;UBERON:0001557!3.90e-07!24;UBERON:0001042!3.90e-07!24;UBERON:0008814!3.90e-07!24;UBERON:0009145!3.90e-07!24;UBERON:0003081!6.06e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.01e-12,31;UBERON:0000344,5.75e-11,15;UBERON:0001242,8.13e-10,13;UBERON:0001262,8.13e-10,13;UBERON:0004786,8.13e-10,13;UBERON:0002193,1.18e-09,48;UBERON:0002405,1.18e-09,48;UBERON:0003350,1.94e-08,9;UBERON:0004808,1.94e-08,9;UBERON:0001277,1.94e-08,9;UBERON:0005409,2.10e-08,47;UBERON:0002390,4.35e-08,45;UBERON:0003061,4.35e-08,45;UBERON:0004923,1.13e-07,24;UBERON:0002384,6.06e-07,46 | |||
|phase1_expression=0.320297694209588,14.6569671208532,15.4699741392442,7.56160528267075,7.51343594919521,8.2260843236826,9.81173090501208,10.4589891987677,21.96304065566,30.8965174745031,1.36974374580404,1.59544317990673,2.73921167889929,3.14713448708391,0.999329285446988,0,0,1.89277299214943,1.23402990245165,0,0.595303031057488,1.98581902401771,2.35079810225042,1.91990907352088,3.21172993494038,8.03924749761028,6.8921919385452,9.48073423817912,3.6104449696711,0.756090389279792,4.21287970245079,0,0,0,1.1554064790051,1.32987716286794,3.06254034393554,0,1.5626706890476,0,3.52938892818609,4.78131839470912,1.94204141212461,1.38486499773135,0.709638518536602,0.734187008646726,0,0,0,0,0,1.43752564364972,3.35565212115473,4.35217285206807,3.36093799142464,1.28629718017973,0.85960031981627,0.515672092277442,0,0,0,0,0,4.04954872776629,1.97773272513395,3.5524005747305,1.49800055259202,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.294628585473668,0.142371680799103,0,0.151452386666368,0.0755715601067855,1.15945795480671,0,0,0,0,0,1.26399978118577,0.340860645156116,0.259786004602869,0,0.422530259330042,1.28326477414318,2.54805239706646,7.11066703153331,0,0.506719730950197,0,1.02765491747154,5.17875767294343,0.29688427812965,0.346970653532272,0,0,0.452167921657868,0.587943535678524,0.251333182659351,0,0.289198713839823,1.76922110389975,0,0.883366073841574,0.484875253135222,3.72783522436244,0,0,5.36459815938042,12.8202183221335,5.39912457894067,5.71816021828791,0,0,0,0,0,0,0,0.407357455401265,0.870848794270651,0.252722758433675,0,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0.378212160335639,0.351902248327898,0.219195732427575,1.11218899690239,0,0.205782136407943,0.995171334092466,0.702213187313235,2.31613116403244,1.98914449576915,0.414251545071004,0.234526059981096,0,0.23674473558521,0.787056926989615,0.308534225774757,0.930135779001631,0.536546802799238,0.583826711835847,0.329119699826961,0.32833492815819,0.972825714550269,0.438599962275997,0.219550115291051,0,0,0,9.58214470653014,2.90895623329899,0.213288250535234,0,0.38660238396628,0.403367049246685,0.667134131534611,1.90225626112559,1.89811624617805,1.81168850196412,0.754005626400808,1.39269530428806,1.36474860983384,4.49409704327111,3.24207074812041,3.58454291857861,0.189667900953082,0.228497025219458,0,0.407302655690628,0,0.140271639780637,0.505892296994058,0.442830443938806,0.470996183524124,0.740382983530803,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.664394068946325,0.637819074629948,0.327726629431476,0.345369963731791,0.289298117163023,6.03165135757089,5.98296252200581,1.47529281905711,3.58717770196152,0,0,0.327869890753351,0.757412781613119,6.62567260774139,8.19921363022941,4.09304455692318,1.43381278771531,0.668396022247182,0.283076530788832,6.07216052512342,6.42962887404886,5.92931666919785,0,2.55492153374884,0.534196811001766,1.14020871547503,3.13443233647817,0,0,0,0.188605079755898,0,0,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,2.06271086496374,0,0,0,0,0.354680467284547,0,0,0,2.3467170806371,0,0,1.81374878235628,0.645857706783622,0.72375509913787,2.02932984805332,2.62625439592098,1.45740418314925,0,1.36696704638282,0.206386867963223,0.185194527369712,0.188368457004691,0.683471138605126,1.14389086603261,14.10820968949,11.056164733569,7.73919853304773,1.90934123603023,0,0,0.432021363287205,0.627264888043406,0.436725127492355,1.07891477107857,0.495920734352016,0.785267825952089,1.42576470620972,0,0,0.149516546043979,1.32366792365678,0.972255941720238,0.516639293910924,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,3.47612232690996,0.608175645870493,0.513554785824136,0.51968329191118,0.358053391334963,1.98681354781265,0.721172697119813,1.62458479892035,1.31256384932592,0.609654453239999,1.51239277705261,1.75424185331554,1.53938946624527,1.63627663054197,0.453460767230423,0,0,0,0.772758376128762,3.56596703357246,3.29672923681077,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.486213434136588,0.419226325255965,0,0,0,0,0.252697211763798,0.25347929989024,0.565879024158229,0.280924522409647,0.320125762024346,0.402048282689293,0,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,1.37147700954166,0.354951612318675,0,0,0.188218760830661,0.169229215783353,1.09756783723664,0.263069711437843,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421 | |phase1_expression=0.320297694209588,14.6569671208532,15.4699741392442,7.56160528267075,7.51343594919521,8.2260843236826,9.81173090501208,10.4589891987677,21.96304065566,30.8965174745031,1.36974374580404,1.59544317990673,2.73921167889929,3.14713448708391,0.999329285446988,0,0,1.89277299214943,1.23402990245165,0,0.595303031057488,1.98581902401771,2.35079810225042,1.91990907352088,3.21172993494038,8.03924749761028,6.8921919385452,9.48073423817912,3.6104449696711,0.756090389279792,4.21287970245079,0,0,0,1.1554064790051,1.32987716286794,3.06254034393554,0,1.5626706890476,0,3.52938892818609,4.78131839470912,1.94204141212461,1.38486499773135,0.709638518536602,0.734187008646726,0,0,0,0,0,1.43752564364972,3.35565212115473,4.35217285206807,3.36093799142464,1.28629718017973,0.85960031981627,0.515672092277442,0,0,0,0,0,4.04954872776629,1.97773272513395,3.5524005747305,1.49800055259202,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.294628585473668,0.142371680799103,0,0.151452386666368,0.0755715601067855,1.15945795480671,0,0,0,0,0,1.26399978118577,0.340860645156116,0.259786004602869,0,0.422530259330042,1.28326477414318,2.54805239706646,7.11066703153331,0,0.506719730950197,0,1.02765491747154,5.17875767294343,0.29688427812965,0.346970653532272,0,0,0.452167921657868,0.587943535678524,0.251333182659351,0,0.289198713839823,1.76922110389975,0,0.883366073841574,0.484875253135222,3.72783522436244,0,0,5.36459815938042,12.8202183221335,5.39912457894067,5.71816021828791,0,0,0,0,0,0,0,0.407357455401265,0.870848794270651,0.252722758433675,0,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0.378212160335639,0.351902248327898,0.219195732427575,1.11218899690239,0,0.205782136407943,0.995171334092466,0.702213187313235,2.31613116403244,1.98914449576915,0.414251545071004,0.234526059981096,0,0.23674473558521,0.787056926989615,0.308534225774757,0.930135779001631,0.536546802799238,0.583826711835847,0.329119699826961,0.32833492815819,0.972825714550269,0.438599962275997,0.219550115291051,0,0,0,9.58214470653014,2.90895623329899,0.213288250535234,0,0.38660238396628,0.403367049246685,0.667134131534611,1.90225626112559,1.89811624617805,1.81168850196412,0.754005626400808,1.39269530428806,1.36474860983384,4.49409704327111,3.24207074812041,3.58454291857861,0.189667900953082,0.228497025219458,0,0.407302655690628,0,0.140271639780637,0.505892296994058,0.442830443938806,0.470996183524124,0.740382983530803,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.664394068946325,0.637819074629948,0.327726629431476,0.345369963731791,0.289298117163023,6.03165135757089,5.98296252200581,1.47529281905711,3.58717770196152,0,0,0.327869890753351,0.757412781613119,6.62567260774139,8.19921363022941,4.09304455692318,1.43381278771531,0.668396022247182,0.283076530788832,6.07216052512342,6.42962887404886,5.92931666919785,0,2.55492153374884,0.534196811001766,1.14020871547503,3.13443233647817,0,0,0,0.188605079755898,0,0,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,2.06271086496374,0,0,0,0,0.354680467284547,0,0,0,2.3467170806371,0,0,1.81374878235628,0.645857706783622,0.72375509913787,2.02932984805332,2.62625439592098,1.45740418314925,0,1.36696704638282,0.206386867963223,0.185194527369712,0.188368457004691,0.683471138605126,1.14389086603261,14.10820968949,11.056164733569,7.73919853304773,1.90934123603023,0,0,0.432021363287205,0.627264888043406,0.436725127492355,1.07891477107857,0.495920734352016,0.785267825952089,1.42576470620972,0,0,0.149516546043979,1.32366792365678,0.972255941720238,0.516639293910924,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,3.47612232690996,0.608175645870493,0.513554785824136,0.51968329191118,0.358053391334963,1.98681354781265,0.721172697119813,1.62458479892035,1.31256384932592,0.609654453239999,1.51239277705261,1.75424185331554,1.53938946624527,1.63627663054197,0.453460767230423,0,0,0,0.772758376128762,3.56596703357246,3.29672923681077,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.486213434136588,0.419226325255965,0,0,0,0,0.252697211763798,0.25347929989024,0.565879024158229,0.280924522409647,0.320125762024346,0.402048282689293,0,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,1.37147700954166,0.354951612318675,0,0,0.188218760830661,0.169229215783353,1.09756783723664,0.263069711437843,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421 | ||
|short_description=p2@Ptger4 | |||
}} | }} |
Latest revision as of 19:50, 26 September 2015
Short description: | p2@Ptger4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ptger4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000120563_5end |
EntrezGene: | Ptger4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.43e-10 | 17 |
nongranular leukocyte | 7.43e-10 | 17 |
lymphoid lineage restricted progenitor cell | 9.97e-10 | 12 |
T cell | 4.74e-09 | 11 |
pro-T cell | 4.74e-09 | 11 |
hematopoietic cell | 5.71e-09 | 32 |
hematopoietic oligopotent progenitor cell | 5.71e-09 | 32 |
hematopoietic stem cell | 5.71e-09 | 32 |
hematopoietic multipotent progenitor cell | 5.71e-09 | 32 |
lymphocyte | 1.08e-08 | 13 |
common lymphoid progenitor | 1.08e-08 | 13 |
intestinal epithelial cell | 1.94e-08 | 9 |
epithelial cell of alimentary canal | 1.94e-08 | 9 |
mature alpha-beta T cell | 5.58e-08 | 9 |
alpha-beta T cell | 5.58e-08 | 9 |
immature T cell | 5.58e-08 | 9 |
mature T cell | 5.58e-08 | 9 |
immature alpha-beta T cell | 5.58e-08 | 9 |
brush border epithelial cell | 1.38e-07 | 6 |
gut absorptive cell | 1.38e-07 | 6 |
enterocyte | 1.38e-07 | 6 |
endo-epithelial cell | 2.37e-07 | 15 |
CD4-positive, alpha-beta T cell | 2.67e-07 | 8 |
connective tissue cell | 6.06e-07 | 46 |
mesenchymal cell | 6.06e-07 | 46 |
hematopoietic lineage restricted progenitor cell | 8.12e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.01e-12 | 31 |
mucosa | 5.75e-11 | 15 |
intestinal mucosa | 8.13e-10 | 13 |
wall of intestine | 8.13e-10 | 13 |
gastrointestinal system mucosa | 8.13e-10 | 13 |
hemolymphoid system | 1.18e-09 | 48 |
immune system | 1.18e-09 | 48 |
epithelium of mucosa | 1.94e-08 | 9 |
gastrointestinal system epithelium | 1.94e-08 | 9 |
intestinal epithelium | 1.94e-08 | 9 |
gastrointestinal system | 2.10e-08 | 47 |
hematopoietic system | 4.35e-08 | 45 |
blood island | 4.35e-08 | 45 |
organ component layer | 1.13e-07 | 24 |
connective tissue | 6.06e-07 | 46 |