FFCP PHASE1:Mm9::chr2:168415815..168415872,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:168415815..168415872,- to FFCP PHASE1:Mm9::chr2:168415815..168415872,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18019 | |EntrezGene=18019 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=B5B2P7,Q60591,B5B2Q6,B5B2R5,Q8C443,Q6P3F6,B5B2Q9,Q3TTU8,B5B2P8,B5B2Q4,B5B2R8,B5B2R0 | |UniProt=B5B2P7,Q60591,B5B2Q6,B5B2R5,Q8C443,Q6P3F6,B5B2Q9,Q3TTU8,B5B2P8,B5B2Q4,B5B2R8,B5B2R0 | ||
|association_with_transcript=0bp_to_ENSMUST00000109184,ENSMUST00000109186,ENSMUST00000138546,ENSMUST00000140137,NM_001037177,uc008oau.1,uc008oav.1,uc008oaw.1,uc008oaz.1,uc008oba.1,uc012cjt.1,uc012cju.1,uc012cjv.1,uc012cjw.1,uc012ckd.1,uc012cke.1,uc012ckg.1_5end | |||
|cluster_id=chr2:168415815..168415872,- | |||
|description=CAGE_peak_1_at_Nfatc2_5end | |||
|id=chr2:168415815..168415872,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.62e-10!88;UBERON:0000926!7.67e-09!193;UBERON:0004120!7.67e-09!193;UBERON:0006603!7.67e-09!193;UBERON:0002193!5.96e-08!48;UBERON:0002390!6.38e-08!45;UBERON:0003061!6.38e-08!45;UBERON:0001045!3.91e-07!13;UBERON:0002075!4.46e-07!19;UBERON:0007100!8.57e-07!18;UBERON:0000948!8.57e-07!18;UBERON:0005498!8.57e-07!18;UBERON:0004140!8.57e-07!18;UBERON:0009881!8.57e-07!18;UBERON:0004141!8.57e-07!18;UBERON:0003084!8.57e-07!18;UBERON:0007005!8.57e-07!18;UBERON:0004139!8.57e-07!18;UBERON:0004291!8.57e-07!18;UBERON:0001264!9.00e-07!12;UBERON:0003922!9.00e-07!12;UBERON:0002114!9.00e-07!12;UBERON:0003923!9.00e-07!12;UBERON:0003924!9.00e-07!12;UBERON:0003921!9.00e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.53e-10,87;UBERON:0002193,3.46e-08,48;UBERON:0002405,3.46e-08,48;UBERON:0002390,3.66e-08,45;UBERON:0003061,3.66e-08,45;UBERON:0000926,4.99e-08,120;UBERON:0004120,4.99e-08,120;UBERON:0006603,4.99e-08,120;UBERON:0002075,4.01e-07,19;UBERON:0007100,7.55e-07,18;UBERON:0000948,7.55e-07,18;UBERON:0005498,7.55e-07,18;UBERON:0004140,7.55e-07,18;UBERON:0009881,7.55e-07,18;UBERON:0004141,7.55e-07,18;UBERON:0003084,7.55e-07,18;UBERON:0007005,7.55e-07,18;UBERON:0004139,7.55e-07,18;UBERON:0004291,7.55e-07,18;UBERON:0001264,8.15e-07,12 | |||
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| |phase1_expression=3.36312578920067,0.697950815278722,3.18499467572675,0.30246421130683,0,4.36486106970913,2.80335168714631,39.2534903262392,7.74337971834167,9.59664557920173,6.8487187290202,8.37607669451032,43.313784672595,47.3818581110966,9.32707333083856,3.44207954562704,2.09868563438444,15.930839350591,21.8011949433125,17.8243653755173,5.10259740906419,3.67376519443276,1.30599894569468,3.35984087866154,2.2940928106717,2.8711598205751,2.58457197695445,1.29282739611533,0.760093677825496,2.52030129759931,1.55211357458713,0,0,0,1.44425809875637,1.49611180822643,1.63335485009895,1.67412652294763,0.7813353445238,2.61761871986899,0.588231488031014,4.09827290975067,0.971020706062307,0,0,0,0,1.52617609466313,1.97717564461025,0.58328969722285,0.55994568650145,1.43752564364972,10.7380867876951,48.5992635147601,62.1773528413558,0.514518872071894,2.29226751951005,3.09403255366465,0.606949382578793,0.528990979272033,0.633831403506179,0,0,37.3458382671781,56.3653826663175,44.7602472416043,23.3688086204356,16.1371688235053,2.38486108309499,2.43010688997043,1.89292465216244,1.71390590642282,1.10434270475807,0.61245399607477,0.575072826109418,0,4.40463523997555,1.40456071893706,1.68967186581868,0.263772575460388,0.914876436024097,0.52091337055676,0.837548997004143,0.56276261003168,1.98637722109853,1.76777151284201,1.70846016958924,1.4911955666024,0.530083353332288,0.453429360640713,5.79728977403356,0,0,0,0,0,6.88177658645584,0,0,0,3.38024207464033,0,0,0,1.73192832808971,2.28023878927589,3.53867111510348,3.9964357901671,77.9403029777987,12.0238132642508,1.56136794089522,1.52232739156071,2.99800146432876,1.95939432718409,3.41007250693544,2.89033160058254,3.21353458054686,11.5679485535929,12.3845477272982,11.8089800461609,6.18356251689102,8.727754556434,14.9113408974498,1.46390398505774,0.83778682725382,7.66371165625774,2.99537811264801,0,0.635351135365324,1.79748767285787,3.66000482254901,0.125654352112864,2.08589184230732,2.81287003063364,2.0778804455956,2.75810147215188,3.36069900706044,7.2156042953854,1.51633655060205,6.94458124425364,0.780722657776222,1.37941262660084,1.44049703844279,3.61691562805716,2.99360596265843,2.0498195245576,2.62364828767241,4.9153640440413,0.646703978798527,0.567318240503458,2.28736461413134,2.6303487891309,3.05851974148158,6.268538997399,6.1734640922383,2.58744546864041,0.702213187313235,0.51469581422943,0.568326998791185,10.7705401718461,15.7132460187334,14.7650890398032,29.1196024769809,33.2531551653112,22.6772655944446,29.5318109833018,26.0225199357631,23.7033645005354,27.9751744852917,29.8784784623953,28.6983585792329,28.6551975353651,32.7129671783665,19.0573114639728,2.10289948564127,0.92614151141356,9.25172592354634,2.90895623329899,1.91959425481711,2.32236671860439,4.63922860759536,5.44545516483025,4.89231696458715,3.99473814836374,4.2707615539006,4.28217282282428,7.28872105520782,4.97391180102877,7.21367122340745,6.29173586057955,5.61958929674205,4.97853183135918,3.79335801906163,5.1411830674378,9.01661885384643,6.51684249105006,8.92181440971078,7.29412526859313,13.3429093332183,15.3514553898786,13.3448918665169,8.14421281883883,0.889357881261447,1.66845105716094,0.982794975566015,0,1.82574109249653,1.68824011826692,2.03700681425136,1.15078454980324,0.810676133875177,0.823684239564244,5.75072826109418,3.34926852901653,3.43241440426017,1.01031551178845,0.358794827043824,0,13.1174765018289,0.947457058852424,3.42226450528254,3.39490171550376,1.40814148973101,5.3602002381381,5.2369600994923,3.90267295715598,3.94087860265477,3.76489972402917,3.82691444777969,8.35702905050264,6.73471429276993,6.79850575333104,25.6345182696763,29.914812610029,6.39293554924747,8.00216564283724,1.9266070798535,0.703270119553219,0,12.6235463602186,0.94652465824877,0.780877488593277,0,0.477937595905104,0.668396022247182,0.849229592366497,1.21443210502468,0.876767573733936,1.58115111178609,2.57057053137446,5.39372323791421,1.95872164033981,1.79175655288934,15.1772513134733,31.8588332015911,10.4395673546642,11.1859716076958,16.597247018519,20.3758306087733,18.1386737286917,18.0899805217755,19.6308213917853,22.1028374598527,26.8631244245444,20.0295356292498,22.6898195146011,5.7874732978144,1.98067203434441,4.65691261617916,6.00143698088458,6.91626911204867,8.38333442729732,8.55654907131029,13.700922710157,2.3467170806371,0.63549621259146,3.08739757276947,37.5940656706575,11.1410454420175,10.072258463002,7.28171298419132,10.3408766839389,5.53813589596716,2.22510362412612,22.8966980269123,6.3979929068599,4.44466865687308,3.20226376907975,11.072232445403,9.83746144788047,29.5762468189308,26.7307273938187,26.8107949180582,5.72802370809068,0.790839983952838,8.74273708645449,5.94029374519907,4.80903080833278,6.33251434863915,7.55240339754996,11.7367907129977,9.94672579539312,3.88844919875379,9.32008969630389,1.12738587736838,4.33597983527538,2.31641886639937,2.33341426012857,3.22899558694328,3.37912250981556,4.10750335260139,9.24451132392046,16.5677764192623,6.03960302065015,3.16833006883652,20.8567339614598,9.933535549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| ||
|short_description=p1@Nfatc2 | |||
}} | }} |
Latest revision as of 05:26, 26 September 2015
Short description: | p1@Nfatc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nfatc2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000109184, ENSMUST00000109186, ENSMUST00000138546, ENSMUST00000140137, NM_001037177, uc008oau.1, uc008oav.1, uc008oaw.1, uc008oaz.1, uc008oba.1, uc012cjt.1, uc012cju.1, uc012cjv.1, uc012cjw.1, uc012ckd.1, uc012cke.1, uc012ckg.1_5end |
EntrezGene: | Nfatc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.53e-10 | 87 |
hemolymphoid system | 3.46e-08 | 48 |
immune system | 3.46e-08 | 48 |
hematopoietic system | 3.66e-08 | 45 |
blood island | 3.66e-08 | 45 |
mesoderm | 4.99e-08 | 120 |
mesoderm-derived structure | 4.99e-08 | 120 |
presumptive mesoderm | 4.99e-08 | 120 |
viscus | 4.01e-07 | 19 |
primary circulatory organ | 7.55e-07 | 18 |
heart | 7.55e-07 | 18 |
primitive heart tube | 7.55e-07 | 18 |
primary heart field | 7.55e-07 | 18 |
anterior lateral plate mesoderm | 7.55e-07 | 18 |
heart tube | 7.55e-07 | 18 |
heart primordium | 7.55e-07 | 18 |
cardiac mesoderm | 7.55e-07 | 18 |
cardiogenic plate | 7.55e-07 | 18 |
heart rudiment | 7.55e-07 | 18 |
pancreas | 8.15e-07 | 12 |