FFCP PHASE1:Mm9::chr4:49857757..49857759,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:49857757..49857759,- to FFCP PHASE1:Mm9::chr4:49857757..49857759,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=401 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:49857757..49857759,- | |||
|description=CAGE_peak_at_chr4:49857757..49857759,- | |||
|id=chr4:49857757..49857759,- | |||
|ontology_enrichment_celltype=CL:0000117!7.98e-13!23;CL:0000337!7.98e-13!23;CL:0000540!5.26e-08!33;CL:0000047!5.26e-08!33;CL:0000031!5.26e-08!33;CL:0000404!5.26e-08!33;CL:0002612!3.54e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.03e-13,23;CL:0000337,8.03e-13,23;CL:0000540,3.89e-09,33;CL:0000047,3.89e-09,33;CL:0000031,3.89e-09,33;CL:0000404,3.89e-09,33;CL:0000393,8.01e-08,39;CL:0000211,8.01e-08,39;CL:0002612,3.18e-07,3;CL:0002614,3.64e-07,3;CL:0002319,3.79e-07,43;CL:0000120,4.17e-07,3;CL:0000221,5.36e-07,44;CL:0000133,5.36e-07,44;CL:0002613,5.46e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.35e-20!52;UBERON:0005068!9.35e-20!52;UBERON:0006241!9.35e-20!52;UBERON:0007135!9.35e-20!52;UBERON:0001017!1.51e-19!73;UBERON:0005743!1.51e-19!73;UBERON:0000073!8.01e-19!75;UBERON:0001016!8.01e-19!75;UBERON:0002020!9.26e-16!34;UBERON:0000955!1.84e-15!50;UBERON:0006238!1.84e-15!50;UBERON:0002616!3.85e-14!49;UBERON:0003076!1.78e-13!12;UBERON:0003057!1.78e-13!12;UBERON:0004121!7.60e-13!102;UBERON:0000924!7.60e-13!102;UBERON:0006601!7.60e-13!102;UBERON:0002346!9.79e-13!71;UBERON:0003075!9.79e-13!71;UBERON:0007284!9.79e-13!71;UBERON:0002240!1.36e-12!6;UBERON:0005174!1.36e-12!6;UBERON:0001137!1.36e-12!6;UBERON:0000033!2.84e-12!63;UBERON:0001948!1.24e-10!5;UBERON:0002315!1.24e-10!5;UBERON:0003080!1.21e-09!40;UBERON:0002791!2.71e-09!29;UBERON:0003528!2.71e-09!29;UBERON:0001893!2.71e-09!29;UBERON:0002780!1.21e-08!39;UBERON:0001890!1.21e-08!39;UBERON:0006240!1.21e-08!39;UBERON:0007811!1.79e-07!86;UBERON:0003056!3.53e-07!49;UBERON:0002257!3.54e-07!3;UBERON:0000153!3.84e-07!94;UBERON:0000369!3.98e-07!5;UBERON:0002435!3.98e-07!5;UBERON:0000204!3.98e-07!5;UBERON:0010082!3.98e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,6.19e-10,2;UBERON:0002298,6.19e-10,2;UBERON:0005290,6.19e-10,2;UBERON:0010096,6.19e-10,2;UBERON:0002420,1.08e-09,8;UBERON:0007245,1.08e-09,8;UBERON:0010009,1.08e-09,8;UBERON:0010011,1.08e-09,8;UBERON:0000454,1.08e-09,8;UBERON:0002257,3.18e-07,3;UBERON:0002038,3.64e-07,3;UBERON:0009663,3.64e-07,3;UBERON:0009661,3.64e-07,3;UBERON:0000125,3.64e-07,3;UBERON:0002308,3.64e-07,3;UBERON:0003076,7.73e-07,12;UBERON:0003057,7.73e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.441737081903227,0,0.0958454710182364,0,0,0.510749352340751,0.921639199537461,0,0.274462930807229,1.04182674111352,0,0,1.98637722109853,0.589257170947335,1.99320353118744,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0,0,0,0,0,0.449371918214468,0.915001205637253,0.502617408451458,0.521472960576829,0.511430914660661,0.62336413367868,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.515559547031063,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0.419226325255965,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.441737081903227,0,0.0958454710182364,0,0,0.510749352340751,0.921639199537461,0,0.274462930807229,1.04182674111352,0,0,1.98637722109853,0.589257170947335,1.99320353118744,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0,0,0,0,0,0.449371918214468,0.915001205637253,0.502617408451458,0.521472960576829,0.511430914660661,0.62336413367868,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.515559547031063,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0.419226325255965,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr4:49857757..49857759,- | |||
}} | }} |
Latest revision as of 14:11, 5 August 2015
Short description: | p@chr4:49857757..49857759, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:49857757..49857759, - |
Coexpression cluster: | MCL_coexpression_mm9:401 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.03e-13 | 23 |
neuroblast (sensu Vertebrata) | 8.03e-13 | 23 |
neuron | 3.89e-09 | 33 |
neuronal stem cell | 3.89e-09 | 33 |
neuroblast | 3.89e-09 | 33 |
electrically signaling cell | 3.89e-09 | 33 |
electrically responsive cell | 8.01e-08 | 39 |
electrically active cell | 8.01e-08 | 39 |
neuron of the ventral spinal cord | 3.18e-07 | 3 |
neuron of the substantia nigra | 3.64e-07 | 3 |
neural cell | 3.79e-07 | 43 |
granule cell | 4.17e-07 | 3 |
ectodermal cell | 5.36e-07 | 44 |
neurectodermal cell | 5.36e-07 | 44 |
striatum neuron | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 6.19e-10 | 2 |
brainstem | 6.19e-10 | 2 |
myelencephalon | 6.19e-10 | 2 |
future myelencephalon | 6.19e-10 | 2 |
basal ganglion | 1.08e-09 | 8 |
nuclear complex of neuraxis | 1.08e-09 | 8 |
aggregate regional part of brain | 1.08e-09 | 8 |
collection of basal ganglia | 1.08e-09 | 8 |
cerebral subcortex | 1.08e-09 | 8 |
ventral horn of spinal cord | 3.18e-07 | 3 |
substantia nigra | 3.64e-07 | 3 |
telencephalic nucleus | 3.64e-07 | 3 |
midbrain nucleus | 3.64e-07 | 3 |
neural nucleus | 3.64e-07 | 3 |
nucleus of brain | 3.64e-07 | 3 |
posterior neural tube | 7.73e-07 | 12 |
chordal neural plate | 7.73e-07 | 12 |