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FFCP PHASE1:Mm9::chr5:17080426..17080449,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:17080426..17080449,+
|DHSsupport=NA
|short_description=p3@Sema3c
|DPIdataset=NA
|description=CAGE_peak_3_at_Sema3c_5end
|association_with_transcript=-17bp_to_ENSMUST00000170181_5end
|EntrezGene=20348
|EntrezGene=20348
|HGNC=
|HGNC=
|MCL_coexpression_id=628
|TSSclassifier=NA
|UniProt=E9PXL2
|UniProt=E9PXL2
|association_with_transcript=-17bp_to_ENSMUST00000170181_5end
|cluster_id=chr5:17080426..17080449,+
|description=CAGE_peak_3_at_Sema3c_5end
|id=chr5:17080426..17080449,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!2.00e-09!333;UBERON:0000464!7.62e-09!57;UBERON:0001008!1.23e-07!17;UBERON:0000489!3.20e-07!21;UBERON:0006554!3.41e-07!16;UBERON:0005178!5.07e-07!17;UBERON:0005181!5.07e-07!17;UBERON:0002224!5.07e-07!17;UBERON:0000915!5.07e-07!17;UBERON:0008947!5.07e-07!17;UBERON:0003258!5.07e-07!17;UBERON:0000479!6.53e-07!349;UBERON:0002113!8.73e-07!14;UBERON:0003918!8.73e-07!14;UBERON:0005095!8.73e-07!14;UBERON:0007687!8.73e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0000489,2.04e-07,21;UBERON:0005178,3.28e-07,17;UBERON:0005181,3.28e-07,17;UBERON:0002224,3.28e-07,17;UBERON:0000915,3.28e-07,17;UBERON:0008947,3.28e-07,17;UBERON:0003258,3.28e-07,17;UBERON:0002113,5.75e-07,14;UBERON:0003918,5.75e-07,14;UBERON:0011143,5.75e-07,14;UBERON:0005095,5.75e-07,14;UBERON:0007687,5.75e-07,14
|phase1_expression=1.12104192973356,1.39590163055744,1.36499771816861,0.30246421130683,0,0.671517087647559,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44277056966847,0.198581902401771,0,0,0.68822784320151,0.57423196411502,0,0.215471232685889,1.33016393619462,0.504060259519861,0.665191531965914,0,0,0,1.44425809875637,1.66234645358492,0.612508068787107,0,0,0,0,0,0,21.7801495097749,24.1277096302445,2.0190142737785,0.782391344348039,1.30815093828268,2.19686182734472,3.4997381833371,0.699932108126813,0,0,0,0,1.28629718017973,1.71920063963254,0,0.606949382578793,0.528990979272033,0.633831403506179,1.35537812827653,2.66788438833342,0.449949858640699,0,0,0.599200221036809,0.768436610643109,2.28117147078651,0.270011876663381,1.47227472945967,1.71390590642282,1.98781686856452,1.46988959057945,1.0543001812006,0,1.10115880999389,2.55374676170375,2.76491759861238,0.659431438650969,0.640413505216868,2.08365348222704,1.67509799400829,1.12552522006336,1.22238598221448,2.06240009831567,4.27115042397309,3.91438836233131,3.3319525066601,9.67315969366855,6.08715426273523,0,0,0,0,0,1.82577746171277,0,0,0.35333957451034,1.97180787687353,1.28326477414318,2.54805239706646,0,17.3192832808971,21.5355885653834,21.2320266906209,3.08296475241462,0,0.148442139064825,1.21439728736295,1.82679286987285,3.68984795609694,2.11011696773672,3.99801604261396,1.13099932196708,0.247194967734374,5.35017620603673,0,7.60304194752823,3.5334642953663,0.969750506270444,11.1835056730873,0.292780797011547,1.67557365450764,1.53274233125155,0,0,0,2.24685959107234,2.74500361691176,1.38219787324151,2.25971616249959,2.55715457330331,3.1168206683934,1.78465389374533,9.57290020192973,5.97153458928446,14.4051972307195,5.89237196482127,0.780722657776222,1.83921683546778,2.34080768746954,3.31550599238573,3.19771546011241,2.17793324484245,3.65436725782942,2.58703370739016,0.431135985865684,1.70195472151037,3.51902248327898,4.16471891612392,4.72680323683516,5.92028683087683,6.37924622864625,4.97585667046233,0,0,0,1.65700618028402,1.40715635988658,0.540186184383045,0.946978942340841,0.196764231747404,1.23413690309903,1.16266972375204,1.60964040839772,1.16765342367169,1.6455984991348,1.80584210487005,2.26992666728396,2.33919979880532,1.53685080703735,2.28150911892632,1.68231958851302,6.89460902941206,0.330418782983798,0.793351699990633,4.47905326123991,4.18026009348789,6.18563814346048,2.8235693447268,2.66853652613844,3.80451252225118,0.949058123089023,2.14108641141214,2.26201687920243,4.57599885694647,4.67913809085888,2.69645822596266,4.10662294761919,4.18196673834171,3.41402221715547,7.76889885746156,10.1436962105772,8.96065842519383,10.861339281387,7.64480436804472,7.58838445491087,6.19962621514329,4.86696056308262,1.72756029490521,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.549122826376163,0,1.86070473834252,0.312037673114561,0,0.358794827043824,0.482443521363367,43.6017528793187,3.41084541186873,1.95557971730431,1.69745085775188,1.64283173801951,2.34508760418542,3.33261097240419,8.19561321002755,17.8127712839996,21.7035395855799,38.1096897091394,62.4319229066962,48.8698498680484,70.8780387049407,0,0,0.491764273019036,3.86311444826625,2.88991061978026,1.87538698547525,0.163934945376675,3.7870639080656,4.10160685241134,4.68526493155966,1.72338718186239,2.62865677747807,2.00518806674155,1.41538265394416,5.26253912177363,3.79932615284705,1.97643888973262,10.6036034419196,5.39372323791421,4.98583690268315,6.18970445543589,9.73323725537959,3.98235415019888,1.21390318077491,2.72091201268276,2.26326095707078,2.36241514304618,6.7635732547664,5.16856586336442,8.72480950746013,7.84294232446387,4.42451461110142,2.10837217149998,1.03135543248187,0,1.44048875225048,0.517434735131018,2.14337035031592,1.77340233642274,3.0322698992352,1.48094118541909,1.522324745573,0,1.0591603543191,2.64634077665954,8.40919890001548,4.52100394748536,7.05661221659424,5.13301079213487,3.93938159388147,1.45740418314925,5.19190845629427,0,0.82554747185289,1.11116716421827,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,4.77335309007557,3.16335993581135,4.26970880966382,5.61627772273367,6.27264888043406,6.33251434863915,8.09186078308924,5.95104881222419,6.80565449158477,11.6653475962614,15.5334828271731,1.69107881605257,2.24274819065968,1.32366792365678,2.72231663681667,2.45403664607689,3.8859908862879,3.87278887530988,9.11430693907651,7.44501345422547,1.69108884578204,2.01621004380506,0.316011120628178,1.41907650703115,1.84879722896689,0.909445760844565,0.358053391334963,0.198681354781265,0.360586348559907,0.590758108698309,0.201932899896295,0.304827226619999,0.100826185136841,0,0,0.116876902181569,3.17422537061296,0,0,0,8.50034213741638,28.7154187440308,9.52388446189778,6.64541975145104,5.01572104035363,1.6942555278512,0.460325236507177,1.71868654031819,2.06223818812425,1.37016503954128,1.5107877947794,0.675022500231806,1.35096360967266,0.453142408984205,1.55328093525546,0.518936737920883,3.19219898720825,3.24393850932855,4.37592090722929,1.67690530102386,2.20612210140017,3.11145418922261,2.88449080134452,5.77654577265267,3.03236654116557,3.04175159868288,2.82939512079114,3.93294331373506,4.03358460150676,3.15895079255873,4.28664322154766,5.09891034157364,2.12200142510076,4.53294490883637,3.53277408322554,4.80016953339582,3.72699192934609,2.62279808942053,2.90692833264657,3.3879376949519,5.24610568928394,2.19513567447327,3.15683653725411,4.20992752922171,6.17256498823512,4.27086065247027,3.94017929502254,2.86461730218783,5.57772628269478,3.85813221962283,1.24905288968973,4.21076895201735,3.00819475667618,4.20834330551455,5.07360263974886,6.95603506861264
|phase1_expression=1.12104192973356,1.39590163055744,1.36499771816861,0.30246421130683,0,0.671517087647559,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44277056966847,0.198581902401771,0,0,0.68822784320151,0.57423196411502,0,0.215471232685889,1.33016393619462,0.504060259519861,0.665191531965914,0,0,0,1.44425809875637,1.66234645358492,0.612508068787107,0,0,0,0,0,0,21.7801495097749,24.1277096302445,2.0190142737785,0.782391344348039,1.30815093828268,2.19686182734472,3.4997381833371,0.699932108126813,0,0,0,0,1.28629718017973,1.71920063963254,0,0.606949382578793,0.528990979272033,0.633831403506179,1.35537812827653,2.66788438833342,0.449949858640699,0,0,0.599200221036809,0.768436610643109,2.28117147078651,0.270011876663381,1.47227472945967,1.71390590642282,1.98781686856452,1.46988959057945,1.0543001812006,0,1.10115880999389,2.55374676170375,2.76491759861238,0.659431438650969,0.640413505216868,2.08365348222704,1.67509799400829,1.12552522006336,1.22238598221448,2.06240009831567,4.27115042397309,3.91438836233131,3.3319525066601,9.67315969366855,6.08715426273523,0,0,0,0,0,1.82577746171277,0,0,0.35333957451034,1.97180787687353,1.28326477414318,2.54805239706646,0,17.3192832808971,21.5355885653834,21.2320266906209,3.08296475241462,0,0.148442139064825,1.21439728736295,1.82679286987285,3.68984795609694,2.11011696773672,3.99801604261396,1.13099932196708,0.247194967734374,5.35017620603673,0,7.60304194752823,3.5334642953663,0.969750506270444,11.1835056730873,0.292780797011547,1.67557365450764,1.53274233125155,0,0,0,2.24685959107234,2.74500361691176,1.38219787324151,2.25971616249959,2.55715457330331,3.1168206683934,1.78465389374533,9.57290020192973,5.97153458928446,14.4051972307195,5.89237196482127,0.780722657776222,1.83921683546778,2.34080768746954,3.31550599238573,3.19771546011241,2.17793324484245,3.65436725782942,2.58703370739016,0.431135985865684,1.70195472151037,3.51902248327898,4.16471891612392,4.72680323683516,5.92028683087683,6.37924622864625,4.97585667046233,0,0,0,1.65700618028402,1.40715635988658,0.540186184383045,0.946978942340841,0.196764231747404,1.23413690309903,1.16266972375204,1.60964040839772,1.16765342367169,1.6455984991348,1.80584210487005,2.26992666728396,2.33919979880532,1.53685080703735,2.28150911892632,1.68231958851302,6.89460902941206,0.330418782983798,0.793351699990633,4.47905326123991,4.18026009348789,6.18563814346048,2.8235693447268,2.66853652613844,3.80451252225118,0.949058123089023,2.14108641141214,2.26201687920243,4.57599885694647,4.67913809085888,2.69645822596266,4.10662294761919,4.18196673834171,3.41402221715547,7.76889885746156,10.1436962105772,8.96065842519383,10.861339281387,7.64480436804472,7.58838445491087,6.19962621514329,4.86696056308262,1.72756029490521,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.549122826376163,0,1.86070473834252,0.312037673114561,0,0.358794827043824,0.482443521363367,43.6017528793187,3.41084541186873,1.95557971730431,1.69745085775188,1.64283173801951,2.34508760418542,3.33261097240419,8.19561321002755,17.8127712839996,21.7035395855799,38.1096897091394,62.4319229066962,48.8698498680484,70.8780387049407,0,0,0.491764273019036,3.86311444826625,2.88991061978026,1.87538698547525,0.163934945376675,3.7870639080656,4.10160685241134,4.68526493155966,1.72338718186239,2.62865677747807,2.00518806674155,1.41538265394416,5.26253912177363,3.79932615284705,1.97643888973262,10.6036034419196,5.39372323791421,4.98583690268315,6.18970445543589,9.73323725537959,3.98235415019888,1.21390318077491,2.72091201268276,2.26326095707078,2.36241514304618,6.7635732547664,5.16856586336442,8.72480950746013,7.84294232446387,4.42451461110142,2.10837217149998,1.03135543248187,0,1.44048875225048,0.517434735131018,2.14337035031592,1.77340233642274,3.0322698992352,1.48094118541909,1.522324745573,0,1.0591603543191,2.64634077665954,8.40919890001548,4.52100394748536,7.05661221659424,5.13301079213487,3.93938159388147,1.45740418314925,5.19190845629427,0,0.82554747185289,1.11116716421827,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,4.77335309007557,3.16335993581135,4.26970880966382,5.61627772273367,6.27264888043406,6.33251434863915,8.09186078308924,5.95104881222419,6.80565449158477,11.6653475962614,15.5334828271731,1.69107881605257,2.24274819065968,1.32366792365678,2.72231663681667,2.45403664607689,3.8859908862879,3.87278887530988,9.11430693907651,7.44501345422547,1.69108884578204,2.01621004380506,0.316011120628178,1.41907650703115,1.84879722896689,0.909445760844565,0.358053391334963,0.198681354781265,0.360586348559907,0.590758108698309,0.201932899896295,0.304827226619999,0.100826185136841,0,0,0.116876902181569,3.17422537061296,0,0,0,8.50034213741638,28.7154187440308,9.52388446189778,6.64541975145104,5.01572104035363,1.6942555278512,0.460325236507177,1.71868654031819,2.06223818812425,1.37016503954128,1.5107877947794,0.675022500231806,1.35096360967266,0.453142408984205,1.55328093525546,0.518936737920883,3.19219898720825,3.243938509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|short_description=p3@Sema3c
}}
}}

Latest revision as of 19:27, 25 September 2015

Short description:p3@Sema3c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sema3c_5end
Coexpression cluster:MCL_coexpression_mm9:628
Association with transcript: -17bp_to_ENSMUST00000170181_5end
EntrezGene:Sema3c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Sema3c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D821.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D924.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D93.33
Mouse Schwann, donor2.CNhs12573.11746-123F99.67
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G117.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G221.54
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G321.23
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.08
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C14.00
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F57.60
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.57
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.97
epididymis, adult.CNhs10490.58-23B214.41
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C63.20
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B56.38
gonad, embryo E13.CNhs11044.1564-45I64.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I62.34
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G16.89
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I54.48
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D86.19
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F87.77
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I28.96
kidney, embryo E18.CNhs11001.1288-20C710.86
kidney, neonate N00.CNhs11214.646-21G77.64
kidney, neonate N10.CNhs11206.758-6D57.59
kidney, neonate N20.CNhs11113.832-19I16.20
kidney, neonate N25.CNhs11122.1353-25F34.87
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B143.60
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C68.20
lung, neonate N06.CNhs11212.683-20E517.81
lung, neonate N07.CNhs11111.715-19A321.70
lung, neonate N10.CNhs11219.750-23E638.11
lung, neonate N20.CNhs11109.822-18A462.43
lung, neonate N25.CNhs11119.1359-25C748.87
lung, neonate N30.CNhs11133.1394-42H270.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I910.60
ovary, adult.CNhs10507.91-2I75.39
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I46.19
oviduct, adult pregnant day01.CNhs10500.988-6G69.73
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C38.41
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H37.06
skin, neonate N06.CNhs11097.693-20I55.13
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D45.62
stomach, embryo E17.CNhs11006.1035-18D56.27
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B88.09
stomach, neonate N07.CNhs11210.718-18A95.95
stomach, neonate N25.CNhs11104.1355-25E46.81
stomach, neonate N30.CNhs11134.1386-42I111.67
submandibular gland, adult.CNhs10469.59-29C115.53
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I49.11
testis, neonate N10.CNhs11204.763-44D97.45
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.85
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E48.50
uterus, adult pregnant day19.CNhs10497.590-15F528.72
uterus, adult.CNhs10509.92-27E59.52
vagina, adult.CNhs10502.89-27D56.65
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F93.86
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
cavitated compound organ2.04e-0721
thoracic cavity element3.28e-0717
thoracic segment organ3.28e-0717
thoracic cavity3.28e-0717
thoracic segment of trunk3.28e-0717
respiratory primordium3.28e-0717
endoderm of foregut3.28e-0717
kidney5.75e-0714
kidney mesenchyme5.75e-0714
upper urinary tract5.75e-0714
kidney rudiment5.75e-0714
kidney field5.75e-0714
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