FFCP PHASE1:Mm9::chr10:42580154..42580183,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268297 | |EntrezGene=268297 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=Q80VG1 | |UniProt=Q80VG1 | ||
|association_with_transcript=0bp_to_ENSMUST00000063063_5end | |association_with_transcript=0bp_to_ENSMUST00000063063_5end | ||
|cluster_id=chr10:42580154..42580183,+ | |||
|description=CAGE_peak_6_at_Scml4_5end | |description=CAGE_peak_6_at_Scml4_5end | ||
|id=chr10:42580154..42580183,+ | |id=chr10:42580154..42580183,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,4.76e-09,3;CL:0000838,1.41e-08,12;CL:0000791,2.21e-08,9;CL:0000789,2.21e-08,9;CL:0002420,2.21e-08,9;CL:0002419,2.21e-08,9;CL:0000790,2.21e-08,9;CL:0000542,7.30e-08,13;CL:0000051,7.30e-08,13;CL:0000988,3.50e-07,32;CL:0002032,3.50e-07,32;CL:0000037,3.50e-07,32;CL:0000837,3.50e-07,32;CL:0000084,8.71e-07,11;CL:0000827,8.71e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.75e-10,3;DOID:4045,4.75e-10,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,2.31e-09,5;UBERON:0002435,2.31e-09,5;UBERON:0000204,2.31e-09,5;UBERON:0010082,2.31e-09,5 | |||
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| ||
|short_description=p6@Scml4 | |short_description=p6@Scml4 | ||
}} | }} |
Latest revision as of 00:43, 26 September 2015
Short description: | p6@Scml4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Scml4_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | 0bp_to_ENSMUST00000063063_5end |
EntrezGene: | Scml4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 4.76e-09 | 3 |
lymphoid lineage restricted progenitor cell | 1.41e-08 | 12 |
mature alpha-beta T cell | 2.21e-08 | 9 |
alpha-beta T cell | 2.21e-08 | 9 |
immature T cell | 2.21e-08 | 9 |
mature T cell | 2.21e-08 | 9 |
immature alpha-beta T cell | 2.21e-08 | 9 |
lymphocyte | 7.30e-08 | 13 |
common lymphoid progenitor | 7.30e-08 | 13 |
hematopoietic cell | 3.50e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.50e-07 | 32 |
hematopoietic stem cell | 3.50e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.50e-07 | 32 |
T cell | 8.71e-07 | 11 |
pro-T cell | 8.71e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 2.31e-09 | 5 |
striatum | 2.31e-09 | 5 |
ventral part of telencephalon | 2.31e-09 | 5 |
future corpus striatum | 2.31e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.75e-10 | 3 |
muscle cancer | 4.75e-10 | 3 |