FFCP PHASE1:Hg19::chr10:21813531..21813550,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:21813531..21813550,+ | |||
|description=CAGE_peak_at_chr10:21813531..21813550,+ | |description=CAGE_peak_at_chr10:21813531..21813550,+ | ||
|id=chr10:21813531..21813550,+ | |id=chr10:21813531..21813550,+ | ||
|ontology_enrichment_celltype=CL:0002319!2.01e-09!25 | |ontology_enrichment_celltype=CL:0002319!2.01e-09!25 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.19e-11;5!CL:0002321;2.46e-11;15!CL:0000333;3.81e-08;5!CL:0002319;7.00e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.57e-12,5;CL:0000047,4.14e-10,8;CL:0000133,4.79e-08,59;CL:0002319,7.22e-07,25;CL:0000540,9.80e-07,6;CL:0000031,9.80e-07,6;CL:0000404,9.80e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.16e-13!31;DOID:1240!6.06e-11!39;DOID:3095!1.93e-09!22;DOID:2994!1.93e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.73e-23;31!DOID:1240;1.49e-17;39!DOID:3095;2.15e-15;22!DOID:2994;2.15e-15;22!DOID:2531;5.46e-11;51!DOID:0060083;5.46e-11;51!DOID:171;5.33e-08;10!DOID:1036;4.86e-07;8!DOID:169;8.96e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.12e-23,31;DOID:1240,4.51e-22,39;DOID:3095,9.19e-16,22;DOID:2994,9.19e-16,22;DOID:2531,1.70e-15,51;DOID:0060083,1.70e-15,51;DOID:162,3.48e-14,235;DOID:14566,1.29e-13,239;DOID:171,3.39e-08,10;DOID:0050686,6.82e-08,137;DOID:1036,4.32e-07,8;DOID:169,6.46e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;3.81e-08;5!UBERON:0002410;3.81e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.55e-08,5;UBERON:0002410,2.55e-08,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0.655324116390517,0.527533956456907,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.572471974262113,0.410623275218653,0.627713197974014,0,0,0,0,0.383829398097213,0,0,0.30120591877825,0,0,0,4.11040615068786,0,0,0.434021741431704,0.223915474239924,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60856642895129,2.24203425192614,5.79444986505169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0,1.03988298880475,0.443458794925128,0.790513071238134,0.261958150995425,0,0,0,0,0,0,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0.419499436209906,0,0.417989933073621,0,0.71153252537342,1.00416183829401,0,0,0,0,0,1.16089646769304,0.44905874525234,0.450445921933289,0,0.949265659568129,0.549605231791222,0,0,0,0,0,0,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0.622422070799533,0.269421344139376,0.490385709340376,0.302714855289863,0,0,0.624320153660641,0.570471821544449,0,1.17434498643765,0.647491777472526,0.702254033511242,0,0.245668634623536,0,0,0,0,0,0.673344455816265,0.375355559615893,0.554128230968366,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.309157587715317,0,0,0.168776332241266,0.0974370051611986,0.757301322732344,0.0920498986422993,0,0.355009592516614,0,0,0,0.272746120590835,0,1.82960559194393,3.84336328132307,1.51052125730374,1.34759371519982,2.27088765788066,5.83963774521328,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.983907508344908,0.514703430895577,0,0,0,0.277765335475589,0,0,0,0.463721619900307,0.117408694235822,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0,0.784917590417525,0,0.66004457238855,0,0,0,0,0,0.514414748524284,1.41849132023278,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,1.27047312111232,1.30139853857622,0.773288812777695,0,1.27587750330633,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,0.664225598535437,0,0.434418072340414,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.410635780069046,0,0,1.0877350463246,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0.328014645699706,0,0.103041011647722,0.366277859273374,0.495056999523528,0.574265537996172,0,0,0.386682873168488,0,0,0.964856007391714,0.429680979473094,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0.855877976067841,0.318203247925937,0,0.179872457583315,0.274537029736055,0,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0.551365343546124,0,0,0.578775534266688,0,0,0.30982349809975,0,0.573645408816206,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0.320472213382419,0,0,1.30062222588003,2.8853842595289,0,0,0,2.68107518185313,2.11673582723883,11.3617679096094,2.80797178113459,3.87998954356427,0.313359791546046,0,6.26379577865932,2.56940920165919,2.82519590067467,0.425846237690326,0,0.614481528616916,0.447352215784832,0.166849141711909,0,1.11362469558097,1.23087398947712,1.89318974933188,7.32758329595204,5.63948020351398,0,0.293016358543788,0.485442086998054,0,0,0,0,0,0,0,0.222617410045812,0,10.1340195901437,0,0,2.51932747854276,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0.689486746482929,0.583209226766509,0,0.885741385813839,0,0,0.221158519862449,0,0,0,0,0.384751292518985,0,0.23056390438806,1.43612231055635,0.651884231532048,0,0.0915975934018623,0.533034776018635,0,1.41282230755522,1.32969345520125,1.35357396370308,1.17637520590644,0.839107934879214,2.84630599086278,2.38404868470568,0,0,0.565412285735763,1.73110911793673,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0.794858446811959,0.0633107959558787,0,0,0,0,0,0.916292769327325,2.23073497220554,0,0,0,0.543616824294456,0.313808538937,0,0.866851769704557,0,0.136905378891993,3.83239764200917,0,0,1.11712960508902,0.229160424011684,0,0.399358000997982,0,0,4.03100834920358,0,2.32991899054908,1.73323001075892,2.22522817629149,2.29172049104229,0.196854963029498,0,0,0,2.57205037544031,2.88832816854191,2.49264202817511,0,0,0,0,0,0.891727998294968,0.211200673038813,0.179287339332845,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.738832686744051,0,0,0,0,0,0,0.342173675768659,0,0,1.572043050996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| ||
|short_description=p@chr10:21813531..21813550,+ | |short_description=p@chr10:21813531..21813550,+ | ||
}} | }} |
Latest revision as of 12:32, 23 July 2015
Short description: | p@chr10:21813531..21813550, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:21813531..21813550, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.57e-12 | 5 |
neuronal stem cell | 4.14e-10 | 8 |
neurectodermal cell | 4.79e-08 | 59 |
neural cell | 7.22e-07 | 25 |
neuron | 9.80e-07 | 6 |
neuroblast | 9.80e-07 | 6 |
electrically signaling cell | 9.80e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.55e-08 | 5 |
autonomic nervous system | 2.55e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.12e-23 | 31 |
leukemia | 4.51e-22 | 39 |
germ cell and embryonal cancer | 9.19e-16 | 22 |
germ cell cancer | 9.19e-16 | 22 |
hematologic cancer | 1.70e-15 | 51 |
immune system cancer | 1.70e-15 | 51 |
cancer | 3.48e-14 | 235 |
disease of cellular proliferation | 1.29e-13 | 239 |
neuroectodermal tumor | 3.39e-08 | 10 |
organ system cancer | 6.82e-08 | 137 |
chronic leukemia | 4.32e-07 | 8 |
neuroendocrine tumor | 6.46e-07 | 6 |