FFCP PHASE1:Mm9::chr17:64950583..64950600,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17158 | |EntrezGene=17158 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P27046,Q8C4L1 | |UniProt=P27046,Q8C4L1 | ||
|association_with_transcript=-388bp_to_NM_008549,uc008dfy.1,uc012awd.1_5end | |association_with_transcript=-388bp_to_NM_008549,uc008dfy.1,uc012awd.1_5end | ||
|cluster_id=chr17:64950583..64950600,+ | |||
|description=CAGE_peak_3_at_Man2a1_5end | |description=CAGE_peak_3_at_Man2a1_5end | ||
|id=chr17:64950583..64950600,+ | |id=chr17:64950583..64950600,+ | ||
|ontology_enrichment_celltype=CL:0000355!6.71e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.45e-08,9;CL:0000222,6.81e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!6.65e-14!47;UBERON:0000926!6.76e-14!193;UBERON:0004120!6.76e-14!193;UBERON:0006603!6.76e-14!193;UBERON:0003104!7.37e-13!131;UBERON:0009142!7.37e-13!131;UBERON:0002100!2.70e-11!98;UBERON:0000490!8.13e-10!66;UBERON:0000949!8.62e-10!72;UBERON:0002405!1.39e-09!70;UBERON:0005172!3.29e-09!49;UBERON:0005173!3.29e-09!49;UBERON:0002417!3.29e-09!49;UBERON:0000916!3.29e-09!49;UBERON:0000466!3.89e-09!79;UBERON:0002530!1.25e-08!65;UBERON:0000077!3.32e-08!97;UBERON:0009569!5.51e-08!66;UBERON:0005177!7.62e-08!85;UBERON:0004119!2.23e-07!130;UBERON:0000925!2.23e-07!130;UBERON:0006595!2.23e-07!130;UBERON:0001041!2.82e-07!92;UBERON:0002365!2.86e-07!25;UBERON:0002330!2.86e-07!25;UBERON:0002368!4.81e-07!60;UBERON:0005057!6.17e-07!51;UBERON:0001134!6.71e-07!9;UBERON:0002036!6.71e-07!9;UBERON:0002385!6.71e-07!9;UBERON:0000486!6.71e-07!9;UBERON:0001015!6.71e-07!9;UBERON:0004290!6.71e-07!9;UBERON:0003082!6.71e-07!9;UBERON:0001007!6.80e-07!128;UBERON:0001555!6.80e-07!128;UBERON:0007026!6.80e-07!128;UBERON:0003929!8.28e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.18e-17,45;UBERON:0002100,8.60e-17,90;UBERON:0000490,2.61e-11,66;UBERON:0005177,4.58e-11,79;UBERON:0000949,5.89e-11,72;UBERON:0003104,1.10e-10,61;UBERON:0009142,1.10e-10,61;UBERON:0002530,1.24e-09,65;UBERON:0005172,2.79e-09,49;UBERON:0005173,2.79e-09,49;UBERON:0002417,2.79e-09,49;UBERON:0000916,2.79e-09,49;UBERON:0001134,2.45e-08,9;UBERON:0002036,2.45e-08,9;UBERON:0002385,2.45e-08,9;UBERON:0000486,2.45e-08,9;UBERON:0007503,2.45e-08,9;UBERON:0001015,2.45e-08,9;UBERON:0002329,2.45e-08,9;UBERON:0003082,2.45e-08,9;UBERON:0003059,2.45e-08,9;UBERON:0007282,2.45e-08,9;UBERON:0004290,2.45e-08,9;UBERON:0009618,2.45e-08,9;UBERON:0002365,3.25e-08,25;UBERON:0002330,3.25e-08,25;UBERON:0009569,3.69e-08,66;UBERON:0000383,5.47e-08,10;UBERON:0002368,1.04e-07,60;UBERON:0002107,3.48e-07,22;UBERON:0007499,3.48e-07,22;UBERON:0006925,3.48e-07,22;UBERON:0009497,3.48e-07,22;UBERON:0000015,3.48e-07,22;UBERON:0002423,3.48e-07,22;UBERON:0006235,3.48e-07,22;UBERON:0008835,3.48e-07,22;UBERON:0003894,3.48e-07,22;UBERON:0004161,3.48e-07,22;UBERON:0008836,3.48e-07,22;UBERON:0003929,3.82e-07,55;UBERON:0005911,5.16e-07,69 | |||
|phase1_expression=0,1.04692622291808,1.81999695755814,0.60492842261366,1.50268718983904,3.18970616632591,1.86890112476421,1.16210991097419,9.15126693985834,10.0647746318457,0.856089841127525,0.398860794976682,1.88320802924326,1.39872643870396,0.999329285446988,2.02475267389826,2.09868563438444,2.68142840554502,4.52477630898938,5.51706547337439,0.935476191661768,0.198581902401771,0.261199789138935,1.43993180514066,1.14704640533585,2.29692785646008,2.15380998079537,1.29282739611533,0.760093677825496,1.51218077855958,1.55211357458713,0.635030673459631,0,0,1.44425809875637,0.166234645358492,0.816677425049476,7.53356935326434,4.6880120671428,7.32933241563318,6.47054636834116,10.9287277593351,4.36959317728038,6.6725313527056,6.89363132292699,7.34187008646726,0.782391344348039,0,0,0.388859798148567,0.279972843250725,1.43752564364972,2.51673909086605,2.90144856804538,1.34437519656986,4.11615097657515,5.15760191889762,5.15672092277442,0.202316460859598,0,0,1.69422266034566,0,0.899899717281399,1.97773272513395,1.4209602298922,0.898800331555214,0,0.103689612308478,0,0.210324961351382,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0.131886287730194,0,0.52091337055676,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0.681535739998656,0.302286240427142,13.6236309689789,3.44169550792555,8.15965600449301,3.77792234146472,6.49776417447669,5.37632264516803,1.12355536105401,1.87473354835864,0,0,0.14084341977668,0,2.54805239706646,0,0.432982082022428,1.01343946190039,0.505524445014783,3.65388415100992,3.10725460376606,5.49235914539852,1.56136794089522,2.74018930480927,2.53677046981664,2.71300752994721,3.64524992120685,2.89033160058254,0.741584903203122,1.73519228303894,0,1.13236794963186,0.220841518460394,0.969750506270444,0,0,0.209446706813455,0.510914110417183,1.1981512450592,0,0.889491589511453,0.299581278809645,0.457500602818626,0,0.173824320192276,1.27857728665165,0.20778804455956,0.162241263067758,1.73126918545538,2.61254638281195,1.0108910337347,0.420883711772948,0,0,0,0.30140963567143,0.340182495756639,0.384341160854549,0,0.517406741478031,0.215567992932842,0,0.351902248327898,0.43839146485515,0.834141747676794,0,0.61734640922383,0.796137067273973,0,1.02939162845886,2.27330799516474,0.414251545071004,0.938104239924385,0.180062061461015,0.710234206755631,0.393528463494808,0.617068451549513,0.232533944750408,0.268273401399619,1.05088808130453,0.493679549740441,0.656669856316381,0.972825714550269,0.438599962275997,1.3173006917463,0.805238512562231,0,0.205809224758569,0.660837565967596,0,0.213288250535234,0,0.38660238396628,0.80673409849337,0.667134131534611,0.380451252225118,0.949058123089023,0.658795818896044,1.50801125280162,0.596869416123452,0.779856348476481,1.79763881730844,0.432276099749388,0.597423819763102,0,0.342745537829186,1.1270773567308,0.203651327845314,0.969762435838129,0.771494018793504,0.948548056863859,0.885660887877613,0.784993639206874,1.60416313098341,7.11486305009157,0.166845105716094,0.589676985339609,0.674586337154561,0.608580364165509,1.68824011826692,1.01850340712568,1.43848068725405,2.7562988551756,1.09824565275233,1.43768206527355,3.34926852901653,2.80833905803104,5.30415643688935,3.40855085691633,4.82443521363367,3.32555742299888,0,0.325929952884052,0.339490171550376,0,0.502518772325447,0.476087281772027,2.73187107000918,1.10344600874334,1.32878813789265,0.637819074629948,2.78567635016755,2.24490476425664,2.4590339958857,3.01582567878545,2.17562273527484,1.96705709207614,1.65562047782839,0,0,2.95082901678016,1.00988370881749,0.315508219416257,0,0.215423397732799,0.955875191810208,0,0,0.404810701674894,0.876767573733936,0,0,1.56134093729095,0.534196811001766,1.79175655288934,0.329940245945071,10.619611067197,0.242780636154981,0.604647113929502,1.88605079755898,2.06711325016541,2.45948118355142,4.13485269069154,1.81766864738753,1.06949213515416,4.10847785316561,3.16255825724996,6.18813259489121,3.40439605753788,0.18006109403131,0,0.214337035031592,0.709360934569094,0.891844088010353,0.329098041204242,3.95804433848979,5.86679270159276,1.27099242518292,4.85162475720916,0.49465875882444,1.13025098687134,1.02531972377865,1.07435109602823,0.984845398470368,0.874442509889552,0.18542530201051,2.05045056957423,1.44470807574256,1.29636169158798,1.31857919903284,1.36694227721025,2.28778173206523,0.849892149969277,1.6794174278839,2.07299960706636,0,0.316335993581135,1.01659733563424,0.324016022465404,0.209088296014469,1.09181281873089,0.539457385539283,0.826534557253359,0.523511883968059,0.518459893167171,2.4853572523477,0.56369293868419,0.299033092087958,0.992750942742586,0.194451188344048,0.387479470433193,0,0.58678619322877,1.0416350787516,3.77493639932559,2.17425708743405,1.44015003128933,2.8441000856536,0.202725215290164,0.513554785824136,0.51968329191118,0.179026695667481,1.19208812868759,0.841368146639782,1.47689527174577,0.908698049533329,1.21930890648,1.10908803650525,1.36441033035653,1.15454209968395,1.40252282617883,0.680191150845634,0.221985953374065,0.0897138566094757,0.335769232728157,0.965947970160952,4.87974436173073,0.183151624267265,0.857473516316263,4.01257683228291,0,0.460325236507177,0,0.859265911718438,0,0,1.35004500046361,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0.888986911206461,1.44224540067226,0,0.252697211763798,1.01391719956096,0.754505365544305,0.280924522409647,0.704276676453562,0.689225627467359,0,0.811190281613988,0.77163688185482,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,1.43061713968393,0.581385666529314,0.846984423737976,0.761531471025089,0.914639864363863,0.263069711437843,0.679020569229309,1.68342681497322,1.30498519936592,0.591026894253381,0.409231043169689,0.464810523557898,1.15743966588685,0.499621155875892,0.701794825336225,1.71896843238639,1.53030665655075,0.661774257358546,0.463735671240843 | |phase1_expression=0,1.04692622291808,1.81999695755814,0.60492842261366,1.50268718983904,3.18970616632591,1.86890112476421,1.16210991097419,9.15126693985834,10.0647746318457,0.856089841127525,0.398860794976682,1.88320802924326,1.39872643870396,0.999329285446988,2.02475267389826,2.09868563438444,2.68142840554502,4.52477630898938,5.51706547337439,0.935476191661768,0.198581902401771,0.261199789138935,1.43993180514066,1.14704640533585,2.29692785646008,2.15380998079537,1.29282739611533,0.760093677825496,1.51218077855958,1.55211357458713,0.635030673459631,0,0,1.44425809875637,0.166234645358492,0.816677425049476,7.53356935326434,4.6880120671428,7.32933241563318,6.47054636834116,10.9287277593351,4.36959317728038,6.6725313527056,6.89363132292699,7.34187008646726,0.782391344348039,0,0,0.388859798148567,0.279972843250725,1.43752564364972,2.51673909086605,2.90144856804538,1.34437519656986,4.11615097657515,5.15760191889762,5.15672092277442,0.202316460859598,0,0,1.69422266034566,0,0.899899717281399,1.97773272513395,1.4209602298922,0.898800331555214,0,0.103689612308478,0,0.210324961351382,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0.131886287730194,0,0.52091337055676,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0.681535739998656,0.302286240427142,13.6236309689789,3.44169550792555,8.15965600449301,3.77792234146472,6.49776417447669,5.37632264516803,1.12355536105401,1.87473354835864,0,0,0.14084341977668,0,2.54805239706646,0,0.432982082022428,1.01343946190039,0.505524445014783,3.65388415100992,3.10725460376606,5.49235914539852,1.56136794089522,2.74018930480927,2.53677046981664,2.71300752994721,3.64524992120685,2.89033160058254,0.741584903203122,1.73519228303894,0,1.13236794963186,0.220841518460394,0.969750506270444,0,0,0.209446706813455,0.510914110417183,1.1981512450592,0,0.889491589511453,0.299581278809645,0.457500602818626,0,0.173824320192276,1.27857728665165,0.20778804455956,0.162241263067758,1.73126918545538,2.61254638281195,1.0108910337347,0.420883711772948,0,0,0,0.30140963567143,0.340182495756639,0.384341160854549,0,0.517406741478031,0.215567992932842,0,0.351902248327898,0.43839146485515,0.834141747676794,0,0.61734640922383,0.796137067273973,0,1.02939162845886,2.27330799516474,0.414251545071004,0.938104239924385,0.180062061461015,0.710234206755631,0.393528463494808,0.617068451549513,0.232533944750408,0.268273401399619,1.05088808130453,0.493679549740441,0.656669856316381,0.972825714550269,0.438599962275997,1.3173006917463,0.805238512562231,0,0.205809224758569,0.660837565967596,0,0.213288250535234,0,0.38660238396628,0.80673409849337,0.667134131534611,0.380451252225118,0.949058123089023,0.658795818896044,1.50801125280162,0.596869416123452,0.779856348476481,1.79763881730844,0.432276099749388,0.597423819763102,0,0.342745537829186,1.1270773567308,0.203651327845314,0.969762435838129,0.771494018793504,0.948548056863859,0.885660887877613,0.784993639206874,1.60416313098341,7.11486305009157,0.166845105716094,0.589676985339609,0.674586337154561,0.608580364165509,1.68824011826692,1.01850340712568,1.43848068725405,2.7562988551756,1.09824565275233,1.43768206527355,3.34926852901653,2.80833905803104,5.30415643688935,3.40855085691633,4.82443521363367,3.32555742299888,0,0.325929952884052,0.339490171550376,0,0.502518772325447,0.476087281772027,2.73187107000918,1.10344600874334,1.32878813789265,0.637819074629948,2.78567635016755,2.24490476425664,2.4590339958857,3.01582567878545,2.17562273527484,1.96705709207614,1.65562047782839,0,0,2.95082901678016,1.00988370881749,0.315508219416257,0,0.215423397732799,0.955875191810208,0,0,0.404810701674894,0.876767573733936,0,0,1.56134093729095,0.534196811001766,1.79175655288934,0.329940245945071,10.619611067197,0.242780636154981,0.604647113929502,1.88605079755898,2.06711325016541,2.45948118355142,4.13485269069154,1.81766864738753,1.06949213515416,4.10847785316561,3.16255825724996,6.18813259489121,3.40439605753788,0.18006109403131,0,0.214337035031592,0.709360934569094,0.891844088010353,0.329098041204242,3.95804433848979,5.86679270159276,1.27099242518292,4.85162475720916,0.49465875882444,1.13025098687134,1.02531972377865,1.07435109602823,0.984845398470368,0.874442509889552,0.18542530201051,2.05045056957423,1.44470807574256,1.29636169158798,1.31857919903284,1.36694227721025,2.28778173206523,0.849892149969277,1.6794174278839,2.07299960706636,0,0.316335993581135,1.01659733563424,0.324016022465404,0.209088296014469,1.09181281873089,0.539457385539283,0.826534557253359,0.523511883968059,0.518459893167171,2.4853572523477,0.56369293868419,0.299033092087958,0.992750942742586,0.194451188344048,0.387479470433193,0,0.58678619322877,1.0416350787516,3.77493639932559,2.17425708743405,1.44015003128933,2.8441000856536,0.202725215290164,0.513554785824136,0.51968329191118,0.179026695667481,1.19208812868759,0.841368146639782,1.47689527174577,0.908698049533329,1.21930890648,1.10908803650525,1.36441033035653,1.15454209968395,1.40252282617883,0.680191150845634,0.221985953374065,0.0897138566094757,0.335769232728157,0.965947970160952,4.87974436173073,0.183151624267265,0.857473516316263,4.01257683228291,0,0.460325236507177,0,0.859265911718438,0,0,1.35004500046361,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0.888986911206461,1.44224540067226,0,0.252697211763798,1.01391719956096,0.754505365544305,0.280924522409647,0.704276676453562,0.689225627467359,0,0.811190281613988,0.77163688185482,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,1.43061713968393,0.581385666529314,0.846984423737976,0.761531471025089,0.914639864363863,0.263069711437843,0.679020569229309,1.68342681497322,1.30498519936592,0.591026894253381,0.409231043169689,0.464810523557898,1.15743966588685,0.499621155875892,0.701794825336225,1.71896843238639,1.53030665655075,0.661774257358546,0.463735671240843 | ||
|short_description=p3@Man2a1 | |short_description=p3@Man2a1 | ||
}} | }} |
Latest revision as of 18:59, 26 September 2015
Short description: | p3@Man2a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Man2a1_5end |
Coexpression cluster: | NA |
Association with transcript: | -388bp_to_NM_008549, uc008dfy.1, uc012awd.1_5end |
EntrezGene: | Man2a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 2.45e-08 | 9 |
mesodermal cell | 6.81e-07 | 7 |