FFCP PHASE1:Hg19::chr11:2156633..2156657,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=95bp_to_AB528666,BT007013,CU674260,DQ892721,DQ895970_5end | |association_with_transcript=95bp_to_AB528666,BT007013,CU674260,DQ892721,DQ895970_5end | ||
|cluster_id=chr11:2156633..2156657,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_32_at_IGF2_5end | |description=CAGE_peak_32_at_IGF2_5end | ||
|id=chr11:2156633..2156657,- | |id=chr11:2156633..2156657,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;5.95e-19;19!CL:0002537;3.68e-09;5!CL:0000669;2.03e-07;4!CL:0000197;4.13e-07;6!CL:0000098;4.13e-07;6!CL:0002167;4.13e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.87e-19,19;CL:0002537,7.71e-09,5;CL:0000669,1.16e-07,4;CL:0000197,4.10e-07,6;CL:0000098,4.10e-07,6;CL:0002167,4.10e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.53e-14!14;UBERON:0000158!8.53e-14!14;UBERON:0000478!1.02e-10!24;UBERON:0007023!1.91e-10!115;UBERON:0004119!1.48e-09!169;UBERON:0000925!1.48e-09!169;UBERON:0006595!1.48e-09!169;UBERON:0000481!1.48e-09!347;UBERON:0000119!5.71e-08!312;UBERON:0003124!6.07e-08!7;UBERON:0000468!6.12e-08!659;UBERON:0000922!9.82e-08!612;UBERON:0000305!1.80e-07!7;UBERON:0000483!2.21e-07!309;UBERON:0004923!6.72e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.05e-18;24!UBERON:0005631;1.20e-17;10!UBERON:0000158;1.20e-17;10!UBERON:0000305;1.36e-12;7!UBERON:0002107;7.76e-11;19!UBERON:0006925;7.76e-11;19!UBERON:0001987;4.59e-08;4!UBERON:0002423;1.62e-07;25!UBERON:0002368;1.93e-07;33!UBERON:0000922;5.74e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.98e-24,14;UBERON:0000158,9.98e-24,14;UBERON:0000478,1.49e-18,24;UBERON:0003124,4.02e-13,7;UBERON:0000305,2.86e-12,7;UBERON:0002107,4.65e-11,19;UBERON:0006925,4.65e-11,19;UBERON:0008836,4.65e-11,19;UBERON:0004871,1.47e-10,8;UBERON:0008835,3.97e-09,22;UBERON:0003894,3.97e-09,22;UBERON:0009854,1.34e-08,23;UBERON:0004119,2.75e-08,160;UBERON:0000925,2.75e-08,160;UBERON:0006595,2.75e-08,160;UBERON:0001987,4.50e-08,4;UBERON:0004340,4.50e-08,4;UBERON:0007499,1.13e-07,25;UBERON:0009497,1.13e-07,25;UBERON:0000015,1.13e-07,25;UBERON:0002423,1.13e-07,25;UBERON:0006235,1.13e-07,25;UBERON:0004161,1.13e-07,25;UBERON:0002368,1.77e-07,35;UBERON:0009856,2.88e-07,26 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.422863212287913,0,0.446961094427288,1.74467704820074,0,0,0,0,0,19.8781648638457,19.782523367134,0.74259811776028,1.32558950291166,0,0,0,0,0.246242116153576,3.67201244239655,1.25381888591235,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0,0.221729397462564,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,2.43042584364528,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,3.93529311876822,5.18558332031999,0,0,0,0.149448680551801,0,0,0,0,0.245668634623536,0,2.37600571456411,3.70900393917835,0,0,0,0.750711119231785,0,0.877955241761676,0,0.45071417671979,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0,0.80823028409406,0,0,0,0,0,0,0,0,1.2781333715647,1.34759371519982,0.252320850875628,0,0,0,0,6.03678306441573,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41026134156626,7.60530208930985,1.96565443335525,1.77236972004421,0,16.4804507647772,0,0,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,3.48768055066624,0.07333828582095,0,0,0,1.06375246633948,1.04007436911366,0.771622122786426,0,0.266422179016099,2.28764789853036,33.6425395342695,1.64648067356154,0,1.42156779497018,0.791951872933429,0,0,0,0,0,0,0,0,0,0.289562613335158,1.64381058040307,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,5.64380861908043,1.50051156317903,1.08506009479894,2.28767947683888,5.35286966391485,3.15404830067869,2.57711112983969,0,2.27407504055985,1.03473071292505,0,0.184369168541703,0,37.006418760458,70.3444018812255,0,0,0,4.24378600024763,4.99306318531491,27.5175166930009,0,0,0,0,1.02341449813341,0.804269605718038,0,0,0,0,0,0,16.1951662452774,0.601519410909855,0.276242966807689,0.459257792658427,1.27463817604702,0.917870904715969,0,0.539107359730903,0,1.46139224653261,0,0,0.170093705276516,1.0795795805107,0,1.89662506280697,1.50506932156456,0,0,0,0,0.261435451024901,0,0.328014645699706,0,2.26690225624989,0,0,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0.689182862422653,0.107420244868274,0.725083469571143,0.340906509664404,9.34836374290742,0.661139661443912,1.34533047155574,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0.372158369359667,1.2655176988749,1.14378116354295,0.255897791311334,1.71175595213568,0,0,1.43897966066652,1.37268514868027,0.353437207037059,0,0,0,0.48763373908959,0,0,2.32049849393576,0,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0.88424136911809,0,0,0,0,0,0.699869440489966,0,0,0,3.29503302718727,3.87454835404107,1.68471475667626,0.443430153536676,5.74308500517399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,43.6902407069973,19.5996689349541,44.2311411022894,0.994147647766298,0,0,0,0.63337622438398,1.59398390600856,0.276283915531148,0.251932747854276,0,0,0,0,0,0,1.1837208676432,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0.438770794307945,0,0,1.23120413606075,0,3.22789466143284,0,0,39.8751449664899,3.29751336246704,159.377398029572,0,0,0,0,0,0,0,0,0,0.163232808159148,1.13082457147153,0,0,0.265372693510018,0.611030144933625,0,0,0,0.134802265961354,24.0773294189637,0,0,0,0,0.394584402849391,6.04953580243319,1.22429104652196,2.02197054811161,0,0.103688191397247,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.193978032976839,0.176512253383001,5.87549926029384,0,0,0.0633107959558787,0.195551382734803,0,0.640358984218058,18.7821033007202,0,0,41.3543944847335,0,0,0,0,0,0.203996435272644,0,0,0.273810757783986,0,0,0,0.837847203816763,0.916641696046735,0,0.998395002494955,0,0,3.15762320687613,0,0,16.9383841960531,17.1424985432826,20.8276950509431,7.18520615057666,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,1.31136470337495,0.105600336519406,0,0,1.42939065274673,1.32418394073086,0,0,0,0.653174720218818,0,0,0,0.226624183040251,2.78449243988357,15.9008266694666,0.129282956361551,0.13223260174269,0,0,0,0.471612915298998,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,1.72022758707021,0.221858103073705,0.18628920882415,0,0.124980407962107,0,0,0.941063278792687,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,6.80047199927361,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48830904013189,0,0,0,0.54604819096007,0,0,0,0,0,0,0,1.05802783107205,1.8374728641192,0.0642292250964595,0,0.319267718114302,0,0.504143392443436,0,0,0,0,0.11796972334774,0,0,0,0,2.3869946653953,0.977734268540344,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,1.60710550763486,0.336283722218824,1.21393120847326,0.455324382702595,11.4426057509804,0,0,0.0679697329768317,0,0,0,0.156986185701028,0.314231179832004,2.5224494698241,2.73947616152849,0,0,1.78691360441641,0,0,13.3870869672986,0.801711364730253,0,0,0,0,0,0,0,0.9164274741762,0,0,0,0,0.365753774946808,0.647428837187895,0.615976841137482,35.9542473714842,7.28566489588709,0,10.9422926338753,0.118920090777569,0,0,0,0.154348316215889,3.93407208907123,0.470317296361523,1.47088993052343,0.235676547101626,4.12247780941385,0.297046400327086,3.3812458206672,0,0.0939839179798536,0.322289439867886,0,0.178553938605658,0,0,1.46067277649303,0.458729283404541,0.286679166302903,1.26217249754548,0.0679914901909147,0.436350690340377,6.87734892670021,0,0,0.865253124247578,0,0,0,0,0,0.0918948995348449,0,1.06090177505535,0.803892390468535,0,0,1.27940389140589,11.4270927102595,0.0645889098360061,0.558672428662721,0,0.0636471582781649,2.22328907854041,2.17716747896961,38.6723630226368,0.26940821205835,0.215166616178029,10.9777917660184,0.569822880276821,0,0,3.86248369058324,21.1176848163109,0.244482888365733,5.2896503181046,1.99727032255654,0.603821380773079,0 | |phase1_expression=0.726713517082227,0.428201047781966,0.422863212287913,0,0.446961094427288,1.74467704820074,0,0,0,0,0,19.8781648638457,19.782523367134,0.74259811776028,1.32558950291166,0,0,0,0,0.246242116153576,3.67201244239655,1.25381888591235,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0,0.221729397462564,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,2.43042584364528,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,3.93529311876822,5.18558332031999,0,0,0,0.149448680551801,0,0,0,0,0.245668634623536,0,2.37600571456411,3.70900393917835,0,0,0,0.750711119231785,0,0.877955241761676,0,0.45071417671979,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0,0.80823028409406,0,0,0,0,0,0,0,0,1.2781333715647,1.34759371519982,0.252320850875628,0,0,0,0,6.03678306441573,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41026134156626,7.60530208930985,1.96565443335525,1.77236972004421,0,16.4804507647772,0,0,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,3.48768055066624,0.07333828582095,0,0,0,1.06375246633948,1.04007436911366,0.771622122786426,0,0.266422179016099,2.28764789853036,33.6425395342695,1.64648067356154,0,1.42156779497018,0.791951872933429,0,0,0,0,0,0,0,0,0,0.289562613335158,1.64381058040307,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,5.64380861908043,1.50051156317903,1.08506009479894,2.28767947683888,5.35286966391485,3.15404830067869,2.57711112983969,0,2.27407504055985,1.03473071292505,0,0.184369168541703,0,37.006418760458,70.3444018812255,0,0,0,4.24378600024763,4.99306318531491,27.5175166930009,0,0,0,0,1.02341449813341,0.804269605718038,0,0,0,0,0,0,16.1951662452774,0.601519410909855,0.276242966807689,0.459257792658427,1.27463817604702,0.917870904715969,0,0.539107359730903,0,1.46139224653261,0,0,0.170093705276516,1.0795795805107,0,1.89662506280697,1.50506932156456,0,0,0,0,0.261435451024901,0,0.328014645699706,0,2.26690225624989,0,0,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0.689182862422653,0.107420244868274,0.725083469571143,0.340906509664404,9.34836374290742,0.661139661443912,1.34533047155574,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0.372158369359667,1.2655176988749,1.14378116354295,0.255897791311334,1.71175595213568,0,0,1.43897966066652,1.37268514868027,0.353437207037059,0,0,0,0.48763373908959,0,0,2.32049849393576,0,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0.88424136911809,0,0,0,0,0,0.699869440489966,0,0,0,3.29503302718727,3.87454835404107,1.68471475667626,0.443430153536676,5.74308500517399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,43.6902407069973,19.5996689349541,44.2311411022894,0.994147647766298,0,0,0,0.63337622438398,1.59398390600856,0.276283915531148,0.251932747854276,0,0,0,0,0,0,1.1837208676432,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0.438770794307945,0,0,1.23120413606075,0,3.22789466143284,0,0,39.8751449664899,3.29751336246704,159.377398029572,0,0,0,0,0,0,0,0,0,0.163232808159148,1.13082457147153,0,0,0.265372693510018,0.611030144933625,0,0,0,0.134802265961354,24.0773294189637,0,0,0,0,0.394584402849391,6.04953580243319,1.22429104652196,2.02197054811161,0,0.103688191397247,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.193978032976839,0.176512253383001,5.87549926029384,0,0,0.0633107959558787,0.195551382734803,0,0.640358984218058,18.7821033007202,0,0,41.3543944847335,0,0,0,0,0,0.203996435272644,0,0,0.273810757783986,0,0,0,0.837847203816763,0.916641696046735,0,0.998395002494955,0,0,3.15762320687613,0,0,16.9383841960531,17.1424985432826,20.8276950509431,7.18520615057666,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,1.31136470337495,0.105600336519406,0,0,1.42939065274673,1.32418394073086,0,0,0,0.653174720218818,0,0,0,0.226624183040251,2.78449243988357,15.9008266694666,0.129282956361551,0.13223260174269,0,0,0,0.471612915298998,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,1.72022758707021,0.221858103073705,0.18628920882415,0,0.124980407962107,0,0,0.941063278792687,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,6.80047199927361,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48830904013189,0,0,0,0.54604819096007,0,0,0,0,0,0,0,1.05802783107205,1.8374728641192,0.0642292250964595,0,0.319267718114302,0,0.504143392443436,0,0,0,0,0.11796972334774,0,0,0,0,2.3869946653953,0.977734268540344,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,1.60710550763486,0.336283722218824,1.21393120847326,0.455324382702595,11.4426057509804,0,0,0.0679697329768317,0,0,0,0.156986185701028,0.314231179832004,2.5224494698241,2.73947616152849,0,0,1.78691360441641,0,0,13.3870869672986,0.801711364730253,0,0,0,0,0,0,0,0.9164274741762,0,0,0,0,0.365753774946808,0.647428837187895,0.615976841137482,35.9542473714842,7.28566489588709,0,10.9422926338753,0.118920090777569,0,0,0,0.154348316215889,3.93407208907123,0.470317296361523,1.47088993052343,0.235676547101626,4.12247780941385,0.297046400327086,3.3812458206672,0,0.0939839179798536,0.322289439867886,0,0.178553938605658,0,0,1.46067277649303,0.458729283404541,0.286679166302903,1.26217249754548,0.0679914901909147,0.436350690340377,6.87734892670021,0,0,0.865253124247578,0,0,0,0,0,0.0918948995348449,0,1.06090177505535,0.803892390468535,0,0,1.27940389140589,11.4270927102595,0.0645889098360061,0.558672428662721,0,0.0636471582781649,2.22328907854041,2.17716747896961,38.6723630226368,0.26940821205835,0.215166616178029,10.9777917660184,0.569822880276821,0,0,3.86248369058324,21.1176848163109,0.244482888365733,5.2896503181046,1.99727032255654,0.603821380773079,0 | ||
|short_description=p32@IGF2 | |short_description=p32@IGF2 | ||
}} | }} |
Latest revision as of 08:07, 17 September 2015
Short description: | p32@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 95bp_to_AB528666, BT007013, CU674260, DQ892721, DQ895970_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.87e-19 | 19 |
amnion mesenchymal stem cell | 7.71e-09 | 5 |
pericyte cell | 1.16e-07 | 4 |
receptor cell | 4.10e-07 | 6 |
sensory epithelial cell | 4.10e-07 | 6 |
olfactory epithelial cell | 4.10e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.98e-24 | 14 |
membranous layer | 9.98e-24 | 14 |
extraembryonic structure | 1.49e-18 | 24 |
chorion | 4.02e-13 | 7 |
amnion | 2.86e-12 | 7 |
liver | 4.65e-11 | 19 |
digestive gland | 4.65e-11 | 19 |
liver bud | 4.65e-11 | 19 |
somatic layer of lateral plate mesoderm | 1.47e-10 | 8 |
hepatic diverticulum | 3.97e-09 | 22 |
liver primordium | 3.97e-09 | 22 |
digestive tract diverticulum | 1.34e-08 | 23 |
endoderm-derived structure | 2.75e-08 | 160 |
endoderm | 2.75e-08 | 160 |
presumptive endoderm | 2.75e-08 | 160 |
placenta | 4.50e-08 | 4 |
allantois | 4.50e-08 | 4 |
epithelial sac | 1.13e-07 | 25 |
epithelium of foregut-midgut junction | 1.13e-07 | 25 |
anatomical boundary | 1.13e-07 | 25 |
hepatobiliary system | 1.13e-07 | 25 |
foregut-midgut junction | 1.13e-07 | 25 |
septum transversum | 1.13e-07 | 25 |
endocrine gland | 1.77e-07 | 35 |
sac | 2.88e-07 | 26 |