FFCP PHASE1:Hg19::chr11:5255755..5255802,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3045 | |EntrezGene=3045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4829 | |HGNC=4829 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFT6,C9JRG0 | |UniProt=E9PFT6,C9JRG0 | ||
|association_with_transcript=-42bp_to_ENST00000292901,ENST00000417377_5end | |association_with_transcript=-42bp_to_ENST00000292901,ENST00000417377_5end | ||
|cluster_id=chr11:5255755..5255802,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_2_at_HBD_5end | |description=CAGE_peak_2_at_HBD_5end | ||
|id=chr11:5255755..5255802,- | |id=chr11:5255755..5255802,- | ||
|ontology_enrichment_celltype=CL:0000764!9.43e-07!2;CL:0000765!9.43e-07!2;CL:0000050!9.43e-07!2;CL:0000038!9.43e-07!2;CL:0000558!9.43e-07!2;CL:0000547!9.43e-07!2;CL:0000549!9.43e-07!2;CL:0000550!9.43e-07!2;CL:0000552!9.43e-07!2 | |ontology_enrichment_celltype=CL:0000764!9.43e-07!2;CL:0000765!9.43e-07!2;CL:0000050!9.43e-07!2;CL:0000038!9.43e-07!2;CL:0000558!9.43e-07!2;CL:0000547!9.43e-07!2;CL:0000549!9.43e-07!2;CL:0000550!9.43e-07!2;CL:0000552!9.43e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;5.34e-20;2!CL:0000558;5.34e-20;2!CL:0002591;3.29e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.34e-20,2;CL:0000765,5.34e-20,2;CL:0000050,5.34e-20,2;CL:0000038,5.34e-20,2;CL:0000558,5.34e-20,2;CL:0000547,5.34e-20,2;CL:0000549,5.34e-20,2;CL:0000550,5.34e-20,2;CL:0000552,5.34e-20,2;CL:0002591,4.33e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!5.23e-11!8;DOID:8692!8.04e-11!31;DOID:1240!5.78e-08!39;DOID:2531!2.46e-07!51;DOID:0060083!2.46e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.11e-12;31!DOID:1036;1.50e-10;8!DOID:8552;3.29e-10;1!DOID:1240;1.94e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.89e-13,31;DOID:1036,1.50e-10,8;DOID:1240,2.11e-10,39;DOID:8552,2.74e-10,1;DOID:2531,8.69e-08,51;DOID:0060083,8.69e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.21e-13!15;UBERON:0000179!2.21e-13!15;UBERON:0000463!2.21e-13!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.04e-48;15!UBERON:0000179;5.04e-48;15!UBERON:0000463;5.04e-48;15!UBERON:0002390;4.38e-20;32!UBERON:0002193;3.09e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.16e-48,15;UBERON:0000179,4.16e-48,15;UBERON:0000463,4.16e-48,15;UBERON:0007023,4.80e-08,114;UBERON:0004535,7.27e-07,109 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0.284338464974843,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,10.7987474757782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.528290604079356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.797814349754612,5.2003718455683,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.630809660135739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,574.460876812349,635.811016892558,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,10.1489521846434,9.1756464857085,7.40541343326411,1.66762242820452,2.46817363851717,6.48473311192717,8.10047155857172,8.72437693923697,0,0,0,0,0,0,0,0.199579371432817,0.5745161103971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,1.08182271390393,0.33307196799782,1.4098700508785,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,4.7896618469388,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,1.49590513710141,1.35357396370308,1.37243774022418,0.671286347903371,0.948768663620925,1.58936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.533937062838473,0.157204305099666,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657852148736121,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,137.81046480894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0.515663103788617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0,0,0.0620747142958579,0,0.12729431655633,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0.284338464974843,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,10.7987474757782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.528290604079356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.797814349754612,5.2003718455683,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.630809660135739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,574.460876812349,635.811016892558,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,10.1489521846434,9.1756464857085,7.40541343326411,1.66762242820452,2.46817363851717,6.48473311192717,8.10047155857172,8.72437693923697,0,0,0,0,0,0,0,0.199579371432817,0.5745161103971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,1.08182271390393,0.33307196799782,1.4098700508785,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,4.7896618469388,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,1.49590513710141,1.35357396370308,1.37243774022418,0.671286347903371,0.948768663620925,1.58936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.533937062838473,0.157204305099666,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657852148736121,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,137.81046480894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0.515663103788617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0,0,0.0620747142958579,0,0.12729431655633,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@HBD | |short_description=p2@HBD | ||
}} | }} |
Latest revision as of 07:39, 18 September 2015
Short description: | p2@HBD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HBD_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -42bp_to_ENST00000292901, ENST00000417377_5end |
EntrezGene: | HBD |
HGNC: | 4829 |
UniProt: | E9PFT6C9JRG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.34e-20 | 2 |
erythroblast | 5.34e-20 | 2 |
megakaryocyte-erythroid progenitor cell | 5.34e-20 | 2 |
erythroid progenitor cell | 5.34e-20 | 2 |
reticulocyte | 5.34e-20 | 2 |
proerythroblast | 5.34e-20 | 2 |
basophilic erythroblast | 5.34e-20 | 2 |
polychromatophilic erythroblast | 5.34e-20 | 2 |
orthochromatic erythroblast | 5.34e-20 | 2 |
smooth muscle cell of the pulmonary artery | 4.33e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 4.16e-48 | 15 |
haemolymphatic fluid | 4.16e-48 | 15 |
organism substance | 4.16e-48 | 15 |
adult organism | 4.80e-08 | 114 |
cardiovascular system | 7.27e-07 | 109 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.89e-13 | 31 |
chronic leukemia | 1.50e-10 | 8 |
leukemia | 2.11e-10 | 39 |
chronic myeloid leukemia | 2.74e-10 | 1 |
hematologic cancer | 8.69e-08 | 51 |
immune system cancer | 8.69e-08 | 51 |