FFCP PHASE1:Hg19::chr11:66636028..66636036,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:66636028..66636036,- | |||
|coexpression_cluster_id=C122 | |||
|description=CAGE_peak_at_chr11:66636028..66636036,- | |description=CAGE_peak_at_chr11:66636028..66636036,- | ||
|id=chr11:66636028..66636036,- | |id=chr11:66636028..66636036,- | ||
|ontology_enrichment_celltype=CL:0000817!4.29e-09!3;CL:0000838!1.54e-08!52;CL:0000542!2.59e-08!53;CL:0000051!2.59e-08!53;CL:0000945!1.12e-07!24;CL:0000826!1.12e-07!24;CL:0000083!2.74e-07!4;CL:0000785!6.60e-07!2;CL:0000955!6.60e-07!2;CL:0000818!6.60e-07!2;CL:0000954!6.60e-07!2;CL:0000816!6.60e-07!2 | |ontology_enrichment_celltype=CL:0000817!4.29e-09!3;CL:0000838!1.54e-08!52;CL:0000542!2.59e-08!53;CL:0000051!2.59e-08!53;CL:0000945!1.12e-07!24;CL:0000826!1.12e-07!24;CL:0000083!2.74e-07!4;CL:0000785!6.60e-07!2;CL:0000955!6.60e-07!2;CL:0000818!6.60e-07!2;CL:0000954!6.60e-07!2;CL:0000816!6.60e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000946;1.13e-11;1!CL:0002127;1.13e-11;1!CL:0000911;1.13e-11;1!CL:0000814;1.13e-11;1!CL:0000786;1.13e-11;1!CL:0002251;1.01e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,1.47e-11,1;CL:0000786,1.47e-11,1;CL:0000980,1.47e-11,1;CL:0002127,1.63e-11,1;CL:0000914,1.63e-11,1;CL:0000911,1.63e-11,1;CL:0000814,1.63e-11,1;CL:0002042,1.63e-11,1;CL:0002039,1.63e-11,1;CL:0002040,1.63e-11,1;CL:0002041,1.63e-11,1;CL:0002251,1.06e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.13e-11;1 | |||
|ontology_enrichment_disease=DOID:162!2.86e-29!235;DOID:14566!2.31e-28!239;DOID:0050687!4.54e-21!143;DOID:305!2.46e-20!106;DOID:0050686!4.18e-17!137;DOID:0060058!4.04e-13!10;DOID:299!4.60e-12!25;DOID:2531!8.67e-12!51;DOID:0060083!8.67e-12!51;DOID:1749!3.11e-09!14;DOID:7!1.10e-07!39;DOID:1793!2.74e-07!4;DOID:4929!4.26e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:299;7.88e-15;25!DOID:1749;3.87e-12;14!DOID:3111;5.04e-12;1!DOID:3603;5.04e-12;1!DOID:3119;1.91e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:299,6.88e-15,25;DOID:305,1.60e-12,106;DOID:3111,4.06e-12,1;DOID:3603,4.06e-12,1;DOID:1749,4.29e-12,14;DOID:162,4.96e-12,235;DOID:14566,9.95e-12,239;DOID:0050686,3.51e-09,137;DOID:0050687,8.11e-09,143;DOID:3119,2.06e-07,14;DOID:2531,4.87e-07,51;DOID:0060083,4.87e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0003343!2.92e-07!4;UBERON:0004785!2.92e-07!4;UBERON:0000974!6.14e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;5.04e-12;1!UBERON:0003703;5.04e-12;1!UBERON:0001174;5.04e-12;1!UBERON:0004914;5.04e-12;1!UBERON:0003343;1.87e-11;4!UBERON:0004785;1.87e-11;4!UBERON:0000344;1.09e-08;20!UBERON:0000974;6.26e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,6.26e-12,1;UBERON:0003703,6.26e-12,1;UBERON:0001174,6.26e-12,1;UBERON:0004914,6.26e-12,1;UBERON:0003343,1.92e-11,4;UBERON:0004785,1.92e-11,4;UBERON:0000974,6.35e-10,10;UBERON:0000344,1.08e-08,20 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.309868802321207,1.27952309238679,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.369254416383208,0,0.629078458031288,0,0,0,0,0,0,0,0,0.260427761085233,1.48681999993533,0,1.365521379426,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0.448788222048861,0,0,0,0,3.06579894587209,0,0,0,0,0.167821586975843,69.0703587116034,0.158936578980379,0,1.46909527343233,2.54435528581093,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0.586993856796269,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.347119476670262,0,1.04471047896483,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,3.02589876023623,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,2.62887354279315,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0.169346664131569,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0,0,0,2.95836972702078,0.59996218756479,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,2.94924308369351,0,1.15525666150338,0,0,0,0,0,0,0.785720083444267,0,2.51355346568977,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,1.15233987555779,0,0,0,0,5.56157009460346,0,0,0.560544326627578,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,1.82876887473404,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0.538951212639521,0,0,0,0,0,0 | ||
|short_description=p@chr11:66636028..66636036,- | |short_description=p@chr11:66636028..66636036,- | ||
}} | }} |
Latest revision as of 01:22, 24 July 2015
Short description: | p@chr11:66636028..66636036, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:66636028..66636036, - |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 1.47e-11 | 1 |
plasma cell | 1.47e-11 | 1 |
plasmablast | 1.47e-11 | 1 |
innate effector T cell | 1.63e-11 | 1 |
immature NK T cell | 1.63e-11 | 1 |
effector T cell | 1.63e-11 | 1 |
mature NK T cell | 1.63e-11 | 1 |
immature NK T cell stage IV | 1.63e-11 | 1 |
immature NK T cell stage I | 1.63e-11 | 1 |
immature NK T cell stage II | 1.63e-11 | 1 |
immature NK T cell stage III | 1.63e-11 | 1 |
epithelial cell of alimentary canal | 1.06e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 6.26e-12 | 1 |
extrahepatic bile duct | 6.26e-12 | 1 |
common bile duct | 6.26e-12 | 1 |
duodenal papilla | 6.26e-12 | 1 |
mucosa of oral region | 1.92e-11 | 4 |
respiratory system mucosa | 1.92e-11 | 4 |
neck | 6.35e-10 | 10 |
mucosa | 1.08e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 6.88e-15 | 25 |
carcinoma | 1.60e-12 | 106 |
cystadenocarcinoma | 4.06e-12 | 1 |
mucinous cystadenocarcinoma | 4.06e-12 | 1 |
squamous cell carcinoma | 4.29e-12 | 14 |
cancer | 4.96e-12 | 235 |
disease of cellular proliferation | 9.95e-12 | 239 |
organ system cancer | 3.51e-09 | 137 |
cell type cancer | 8.11e-09 | 143 |
gastrointestinal system cancer | 2.06e-07 | 14 |
hematologic cancer | 4.87e-07 | 51 |
immune system cancer | 4.87e-07 | 51 |