FFCP PHASE1:Mm9::chr2:118549252..118549270,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:118549252..118549270,- | |||
|description=CAGE_peak_at_chr2:118549252..118549270,- | |description=CAGE_peak_at_chr2:118549252..118549270,- | ||
|id=chr2:118549252..118549270,- | |id=chr2:118549252..118549270,- | ||
|ontology_enrichment_celltype=CL:0000988!9.85e-09!32;CL:0002032!9.85e-09!32;CL:0000037!9.85e-09!32;CL:0000566!9.85e-09!32;CL:0000837!9.85e-09!32;CL:0002031!3.03e-08!25;CL:0000738!2.08e-07!17;CL:0002087!2.08e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,1.45e-07,2;CL:0002031,5.95e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.76e-17!48;UBERON:0002390!4.39e-17!45;UBERON:0003061!4.39e-17!45;UBERON:0002405!1.97e-16!70;UBERON:0004177!4.88e-13!29;UBERON:0005057!1.41e-11!51;UBERON:0003408!2.26e-10!24;UBERON:0002370!1.04e-09!23;UBERON:0000974!1.04e-09!23;UBERON:0004807!1.04e-09!23;UBERON:0005058!1.04e-09!23;UBERON:0003351!1.04e-09!23;UBERON:0009113!1.04e-09!23;UBERON:0003295!1.04e-09!23;UBERON:0009722!1.04e-09!23;UBERON:0005562!1.04e-09!23;UBERON:0007690!1.04e-09!23;UBERON:0006562!5.62e-09!24;UBERON:0001557!5.62e-09!24;UBERON:0001042!5.62e-09!24;UBERON:0008814!5.62e-09!24;UBERON:0009145!5.62e-09!24;UBERON:0001004!3.15e-08!42;UBERON:0000065!1.08e-07!41;UBERON:0001041!2.22e-07!92;UBERON:0005911!2.57e-07!69;UBERON:0000072!3.78e-07!27;UBERON:0000077!5.68e-07!97;UBERON:0003081!8.87e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.71e-15,45;UBERON:0003061,8.71e-15,45;UBERON:0002193,1.18e-13,48;UBERON:0002405,1.18e-13,48;UBERON:0004177,2.02e-11,29;UBERON:0005057,2.02e-11,29;UBERON:0003408,2.37e-09,24;UBERON:0000077,4.21e-09,35;UBERON:0002370,7.19e-08,23;UBERON:0000974,7.19e-08,23;UBERON:0004807,7.19e-08,23;UBERON:0005058,7.19e-08,23;UBERON:0003351,7.19e-08,23;UBERON:0009113,7.19e-08,23;UBERON:0003295,7.19e-08,23;UBERON:0009722,7.19e-08,23;UBERON:0005562,7.19e-08,23;UBERON:0007690,7.19e-08,23;UBERON:0006562,1.73e-07,24;UBERON:0001557,1.73e-07,24;UBERON:0001042,1.73e-07,24;UBERON:0008814,1.73e-07,24;UBERON:0009145,1.73e-07,24;UBERON:0003081,4.22e-07,87 | |||
|phase1_expression=0,0,0,0,0,0.503637815735669,0.233612640595526,1.29123323441576,0.84473233291,0.234064526321993,0.513653904676515,0.478632953972018,2.05440875917447,3.67165690159789,0,0.809901069559304,0.699561878128147,1.41957974411207,1.23402990245165,0.84877930359606,0,0,0.261199789138935,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,0,1.57057123192139,1.76469446409304,1.36609096991689,2.42755176515577,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,2.35265659399725,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.593768556259299,0,0,0,0,0,0.125666591329675,0,0,2.65383165584962,0.323533699894818,0.883366073841574,0.969750506270444,0,0,0,0,0.958520996047362,0,0.762421362438388,0.299581278809645,0,0,0,0,0,0,0.101839363850316,0.870848794270651,0,0.210441855886474,0.130120442962704,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0,1.28673953557358,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0.397912944082302,0,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0.674586337154561,0.202860121388503,1.20588579876208,1.01850340712568,0.575392274901621,0.648540907100142,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0,0,0,0.739012760666419,0,0,0,0.234690248288502,0,0,0,0.472905432318573,0.8858587585951,0.637819074629948,0.983179888294428,0.518054945597687,0.723245292907558,1.50791283939272,3.80733978673097,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0.258717367565509,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,0.18542530201051,2.22132145037209,0.206386867963223,1.66675074632741,0.565105371014073,1.50363650493128,0.686334519619568,1.69978429993855,0.69975726161829,0.690999869022119,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,1.24267862617385,0,0.448549638131936,0,0,0.129159823477731,0,0.234714477291508,0,0,0,0,2.52808896502543,1.21635129174099,0.513554785824136,0.129920822977795,0.358053391334963,0.39736270956253,0.721172697119813,2.06765338044408,0.908698049533329,0.762068066549998,1.51239277705261,1.94915761479505,0.673482891482306,3.03879945672079,0,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0.564751842617067,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.412070114477788,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0,0.467863216890817,0.429742108096597,0.382576664137687,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0.503637815735669,0.233612640595526,1.29123323441576,0.84473233291,0.234064526321993,0.513653904676515,0.478632953972018,2.05440875917447,3.67165690159789,0,0.809901069559304,0.699561878128147,1.41957974411207,1.23402990245165,0.84877930359606,0,0,0.261199789138935,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,0,1.57057123192139,1.76469446409304,1.36609096991689,2.42755176515577,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,2.35265659399725,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.593768556259299,0,0,0,0,0,0.125666591329675,0,0,2.65383165584962,0.323533699894818,0.883366073841574,0.969750506270444,0,0,0,0,0.958520996047362,0,0.762421362438388,0.299581278809645,0,0,0,0,0,0,0.101839363850316,0.870848794270651,0,0.210441855886474,0.130120442962704,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0,1.28673953557358,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0.397912944082302,0,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0.674586337154561,0.202860121388503,1.20588579876208,1.01850340712568,0.575392274901621,0.648540907100142,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0,0,0,0.739012760666419,0,0,0,0.234690248288502,0,0,0,0.472905432318573,0.8858587585951,0.637819074629948,0.983179888294428,0.518054945597687,0.723245292907558,1.50791283939272,3.80733978673097,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0.258717367565509,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,0.18542530201051,2.22132145037209,0.206386867963223,1.66675074632741,0.565105371014073,1.50363650493128,0.686334519619568,1.69978429993855,0.69975726161829,0.690999869022119,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,1.24267862617385,0,0.448549638131936,0,0,0.129159823477731,0,0.234714477291508,0,0,0,0,2.52808896502543,1.21635129174099,0.513554785824136,0.129920822977795,0.358053391334963,0.39736270956253,0.721172697119813,2.06765338044408,0.908698049533329,0.762068066549998,1.51239277705261,1.94915761479505,0.673482891482306,3.03879945672079,0,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0.564751842617067,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.412070114477788,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0,0.467863216890817,0.429742108096597,0.382576664137687,0.220591419119515,0 | ||
|short_description=p@chr2:118549252..118549270,- | |short_description=p@chr2:118549252..118549270,- | ||
}} | }} |
Latest revision as of 20:02, 3 August 2015
Short description: | p@chr2:118549252..118549270, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:118549252..118549270, - |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 1.45e-07 | 2 |
hematopoietic lineage restricted progenitor cell | 5.95e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.71e-15 | 45 |
blood island | 8.71e-15 | 45 |
hemolymphoid system | 1.18e-13 | 48 |
immune system | 1.18e-13 | 48 |
hemopoietic organ | 2.02e-11 | 29 |
immune organ | 2.02e-11 | 29 |
gland of gut | 2.37e-09 | 24 |
mixed endoderm/mesoderm-derived structure | 4.21e-09 | 35 |
thymus | 7.19e-08 | 23 |
neck | 7.19e-08 | 23 |
respiratory system epithelium | 7.19e-08 | 23 |
hemolymphoid system gland | 7.19e-08 | 23 |
pharyngeal epithelium | 7.19e-08 | 23 |
thymic region | 7.19e-08 | 23 |
pharyngeal gland | 7.19e-08 | 23 |
entire pharyngeal arch endoderm | 7.19e-08 | 23 |
thymus primordium | 7.19e-08 | 23 |
early pharyngeal endoderm | 7.19e-08 | 23 |
pharynx | 1.73e-07 | 24 |
upper respiratory tract | 1.73e-07 | 24 |
chordate pharynx | 1.73e-07 | 24 |
pharyngeal arch system | 1.73e-07 | 24 |
pharyngeal region of foregut | 1.73e-07 | 24 |
lateral plate mesoderm | 4.22e-07 | 87 |